Guide to the Human Genome
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Name: ACSL6 Sequence: fasta or formatted (722aa) NCBI GI: 57165412
Description:

acyl-CoA synthetase long-chain family member 6 isoform b

Referenced in:

Fatty Acid Synthesis
Fatty Acid Oxidation and Ketone Bodies

Other entries for this name:
alt prot [722aa] acyl-CoA synthetase long-chain family member 6 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         47           2
 C cysteine            2.5         18           1
 D aspartate           5.0         36           2
 E glutamate           6.0         43           2
 F phenylalanine       4.7         34           2
 G glycine             8.2         59           2
 H histidine           2.2         16           1
 I isoleucine          6.2         45           2
 K lysine              6.0         43           2
 L leucine            10.7         77           3
 M methionine          2.4         17           1
 N asparagine          2.5         18           1
 P proline             5.5         40           2
 Q glutamine           4.7         34           1
 R arginine            4.8         35           2
 S serine              5.4         39           1
 T threonine           4.8         35           2
 V valine              7.3         53           3
 W tryptophan          1.5         11           1
 Y tyrosine            3.0         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA synthetase long-chain family member 6 isofo... 
ACSL6                 0.983   acyl-CoA synthetase long-chain family member 6 isofo...
ACSL1                 0.678   acyl-CoA synthetase long-chain family member 1 [Homo...
ACSL5                 0.594   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL5                 0.594   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL5                 0.594   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL3                 0.202   acyl-CoA synthetase long-chain family member 3 [Homo...
ACSL3                 0.202   acyl-CoA synthetase long-chain family member 3 [Homo...
ACSL4                 0.194   acyl-CoA synthetase long-chain family member 4 isofor...
ACSL4                 0.194   acyl-CoA synthetase long-chain family member 4 isofo...
ACSBG1                0.093   lipidosin 
ACSBG2                0.080   bubblegum-related acyl-CoA synthetase 2 
ACSF3                 0.044   acyl-CoA synthetase family member 3 
ACSF3                 0.044   acyl-CoA synthetase family member 3 
ACSF2                 0.038   acyl-CoA synthetase family member 2 
ACSM2A                0.024   acyl-CoA synthetase medium-chain family member 2A [H...
ACSM2B                0.024   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2B                0.024   acyl-CoA synthetase medium-chain family member 2B [...
ACSM3                 0.024   SA hypertension-associated homolog isoform 1 
ACSM4                 0.023   acyl-CoA synthetase medium-chain family member 4 [H...
ACSM5                 0.017   acyl-CoA synthetase medium-chain family member 5 [Ho...
LOC100291873          0.015   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.015   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
ACSM1                 0.014   acyl-CoA synthetase medium-chain family member 1 [H...
C10orf129             0.012   acyl-coenzyme A synthetase ACSM6, mitochondrial [Ho...
SLC27A5               0.010   solute carrier family 27 (fatty acid transporter), m...
SLC27A3               0.010   solute carrier family 27 member 3 
ACSM3                 0.008   SA hypertension-associated homolog isoform 2 
AASDH                 0.007   aminoadipate-semialdehyde dehydrogenase 
KRT25                 0.006   keratin 25 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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