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Search of human proteins with 157057543
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157057543 sorting nexin 18 isoform b [Homo sapiens]
(628 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157057543 sorting nexin 18 isoform b [Homo sapiens] 1297 0.0
gi|224177511 sorting nexin 18 isoform c [Homo sapiens] 1224 0.0
gi|157057545 sorting nexin 18 isoform a [Homo sapiens] 1122 0.0
gi|23397574 sorting nexin 33 [Homo sapiens] 499 e-141
gi|7706706 sorting nexin 9 [Homo sapiens] 299 6e-81
gi|153791707 sorting nexin family member 30 [Homo sapiens] 71 3e-12
gi|23111055 sorting nexin 7 isoform b [Homo sapiens] 67 4e-11
gi|194294540 sorting nexin 7 isoform a [Homo sapiens] 67 4e-11
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 64 5e-10
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 64 5e-10
gi|239745060 PREDICTED: similar to breast cancer anti-estrogen r... 60 8e-09
gi|23943858 sorting nexin 8 [Homo sapiens] 60 8e-09
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 57 5e-08
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 57 5e-08
gi|44662836 breast cancer anti-estrogen resistance 1 [Homo sapiens] 57 5e-08
gi|239756225 PREDICTED: similar to breast cancer anti-estrogen r... 56 1e-07
gi|239750776 PREDICTED: similar to breast cancer anti-estrogen r... 56 1e-07
gi|239745044 PREDICTED: similar to breast cancer anti-estrogen r... 56 1e-07
gi|4507145 sorting nexin 4 [Homo sapiens] 55 2e-07
gi|19224660 protein kinase C and casein kinase substrate in neur... 53 7e-07
gi|223468657 SH3-domain GRB2-like 3 [Homo sapiens] 51 4e-06
gi|4506931 SH3-domain GRB2-like 2 [Homo sapiens] 50 5e-06
gi|24308229 protein kinase C and casein kinase substrate in neur... 50 6e-06
gi|148747351 protein kinase C and casein kinase substrate in neu... 50 6e-06
gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo sa... 50 6e-06
gi|4506929 SH3-domain GRB2-like 1 [Homo sapiens] 50 6e-06
gi|23111036 sorting nexin 1 isoform c [Homo sapiens] 50 8e-06
gi|23111034 sorting nexin 1 isoform a [Homo sapiens] 50 8e-06
gi|23111026 sorting nexin 11 [Homo sapiens] 50 8e-06
gi|23111028 sorting nexin 11 [Homo sapiens] 50 8e-06
>gi|157057543 sorting nexin 18 isoform b [Homo sapiens]
Length = 628
Score = 1297 bits (3356), Expect = 0.0
Identities = 628/628 (100%), Positives = 628/628 (100%)
Query: 1 MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR 60
MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR
Sbjct: 1 MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR 60
Query: 61 APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ 120
APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ
Sbjct: 61 APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ 120
Query: 121 PPGAGFPYGGGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLD 180
PPGAGFPYGGGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLD
Sbjct: 121 PPGAGFPYGGGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLD 180
Query: 181 GSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGG 240
GSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGG
Sbjct: 181 GSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGG 240
Query: 241 EAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKL 300
EAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKL
Sbjct: 241 EAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKL 300
Query: 301 VPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWM 360
VPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWM
Sbjct: 301 VPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWM 360
Query: 361 NHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALD 420
NHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALD
Sbjct: 361 NHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALD 420
Query: 421 LQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFEL 480
LQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFEL
Sbjct: 421 LQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFEL 480
Query: 481 DQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK 540
DQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK
Sbjct: 481 DQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK 540
Query: 541 GKAWPLEQVIWSVLCRLKGATLTAVPLWVSESYSTGEEASRDVDAWVFSLECKLDCSTGS 600
GKAWPLEQVIWSVLCRLKGATLTAVPLWVSESYSTGEEASRDVDAWVFSLECKLDCSTGS
Sbjct: 541 GKAWPLEQVIWSVLCRLKGATLTAVPLWVSESYSTGEEASRDVDAWVFSLECKLDCSTGS 600
Query: 601 FLLEYLALGNEYSFSKVQRVPLMTVLSF 628
FLLEYLALGNEYSFSKVQRVPLMTVLSF
Sbjct: 601 FLLEYLALGNEYSFSKVQRVPLMTVLSF 628
>gi|224177511 sorting nexin 18 isoform c [Homo sapiens]
Length = 591
Score = 1224 bits (3166), Expect = 0.0
Identities = 591/591 (100%), Positives = 591/591 (100%)
Query: 1 MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR 60
MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR
Sbjct: 1 MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR 60
Query: 61 APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ 120
APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ
Sbjct: 61 APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ 120
Query: 121 PPGAGFPYGGGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLD 180
PPGAGFPYGGGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLD
Sbjct: 121 PPGAGFPYGGGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLD 180
Query: 181 GSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGG 240
GSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGG
Sbjct: 181 GSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGG 240
Query: 241 EAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKL 300
EAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKL
Sbjct: 241 EAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKL 300
Query: 301 VPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWM 360
VPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWM
Sbjct: 301 VPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWM 360
Query: 361 NHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALD 420
NHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALD
Sbjct: 361 NHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALD 420
Query: 421 LQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFEL 480
LQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFEL
Sbjct: 421 LQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFEL 480
Query: 481 DQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK 540
DQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK
Sbjct: 481 DQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK 540
Query: 541 GKAWPLEQVIWSVLCRLKGATLTAVPLWVSESYSTGEEASRDVDAWVFSLE 591
GKAWPLEQVIWSVLCRLKGATLTAVPLWVSESYSTGEEASRDVDAWVFSLE
Sbjct: 541 GKAWPLEQVIWSVLCRLKGATLTAVPLWVSESYSTGEEASRDVDAWVFSLE 591
>gi|157057545 sorting nexin 18 isoform a [Homo sapiens]
Length = 624
Score = 1122 bits (2901), Expect = 0.0
Identities = 541/541 (100%), Positives = 541/541 (100%)
Query: 1 MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR 60
MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR
Sbjct: 1 MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR 60
Query: 61 APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ 120
APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ
Sbjct: 61 APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ 120
Query: 121 PPGAGFPYGGGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLD 180
PPGAGFPYGGGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLD
Sbjct: 121 PPGAGFPYGGGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLD 180
Query: 181 GSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGG 240
GSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGG
Sbjct: 181 GSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGG 240
Query: 241 EAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKL 300
EAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKL
Sbjct: 241 EAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKL 300
Query: 301 VPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWM 360
VPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWM
Sbjct: 301 VPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWM 360
Query: 361 NHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALD 420
NHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALD
Sbjct: 361 NHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALD 420
Query: 421 LQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFEL 480
LQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFEL
Sbjct: 421 LQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFEL 480
Query: 481 DQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK 540
DQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK
Sbjct: 481 DQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK 540
Query: 541 G 541
G
Sbjct: 541 G 541
>gi|23397574 sorting nexin 33 [Homo sapiens]
Length = 574
Score = 499 bits (1286), Expect = e-141
Identities = 275/548 (50%), Positives = 351/548 (64%), Gaps = 64/548 (11%)
Query: 1 MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR 60
MAL+ RALYDF SEN EIS+++ E L + SE ++GWL+G NSRG+ GLFPASYV+++R
Sbjct: 1 MALKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIVR 60
Query: 61 APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ 120
+ G A Y++ P G P A +L PS
Sbjct: 61 S--------GISTNHADYSSSPAGS---------------PGAQVSLYNS-----PSVAS 92
Query: 121 PPGAGFPYGGGALQPSPQQLYGGYQASQGS-----DDDWDDEWDDSSTVADEP--GALGS 173
P +G GG+ G+ ++QGS DDDWDD WDD TV +EP G LG+
Sbjct: 93 PARSG----GGS----------GFLSNQGSFEEDDDDDWDD-WDDGCTVVEEPRAGGLGT 137
Query: 174 GAYPDLDGSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFS 233
+P L+ S GA ++ R L Q + K + V RNLNRFS
Sbjct: 138 NGHPPLNLSYP---GAYPSQHMAFRPKPPLER-------QDSLASAKRGSVVGRNLNRFS 187
Query: 234 TFVKSGGEAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMK 293
FV+SG EAF+LG+ K + + +GP GP+W+ NP+PF C+++DPTKQTKFKG+K
Sbjct: 188 CFVRSGVEAFILGDVPMMAKIAETYSIEMGPRGPQWKANPHPFACSVEDPTKQTKFKGIK 247
Query: 294 SYISYKLVPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRR 353
SYISYKL PTH PV+RRYKHFDWLY RL KF VISVPHLPEKQATGRFEEDFI KR+
Sbjct: 248 SYISYKLTPTHAASPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEEDFIEKRK 307
Query: 354 KGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLST 413
+ LI WM+HM SHPVL+Q + FQHFL+C D+K WK GKR+AEKDEMVGA+F LT
Sbjct: 308 RRLILWMDHMTSHPVLSQYEGFQHFLSC---LDDKQWKMGKRRAEKDEMVGASFLLTFQI 364
Query: 414 PPAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRG 473
P DLQ+VE ++D FK F+KKMDDS LQL+ A+E RK V GF+KE+QK+G +F+
Sbjct: 365 -PTEHQDLQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSAFQA 423
Query: 474 LSQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFP 533
+S +F++D S LN AI+ TG Y+AIGE+FAEQP+ DL ++D L+LYQG L+NFP
Sbjct: 424 ISHSFQMDPPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFP 483
Query: 534 DIIHVQKG 541
DIIH+QKG
Sbjct: 484 DIIHLQKG 491
>gi|7706706 sorting nexin 9 [Homo sapiens]
Length = 595
Score = 299 bits (765), Expect = 6e-81
Identities = 200/557 (35%), Positives = 273/557 (49%), Gaps = 61/557 (10%)
Query: 1 MALRARALYDFRSENPG--EISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQV 58
MA +AR +YDF +E PG E+++ E E++++ + GWLEG N +G+RGL P YV++
Sbjct: 1 MATKARVMYDFAAE-PGNNELTVNEGEIITITNPDVGGGWLEGRNIKGERGLVPTDYVEI 59
Query: 59 IRAPEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPA------SFKPPPDAFQALLQPQ- 111
+ + G A + + + + S P A+ A
Sbjct: 60 LPSDGKDQFSCGNSVADQAFLDSLSASTAQASSSAASNNHQVGSGNDPWSAWSASKSGNW 119
Query: 112 QAPPPSTFQPPGAGF------PYGGGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVA 165
++ QP GAG P PQ G + G DDDWD++WD
Sbjct: 120 ESSEGWGAQPEGAGAQRNTNTPNNWDTAFGHPQAYQG---PATGDDDDWDEDWD------ 170
Query: 166 DEPGALGSGAYPDLDGSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATV 225
G S + D S SA G A RG S SS+++
Sbjct: 171 ---GPKSSSYFKD---SESADAGGA--------------QRGNS---------RASSSSM 201
Query: 226 SRNLNRFSTFVKSGGEAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTK 285
LN+F F K G E ++L A K +K+ +++G YGP W F C + DP K
Sbjct: 202 KIPLNKFPGFAKPGTEQYLL--AKQLAKPKEKIPIIVGDYGPMWVYPTSTFDCVVADPRK 259
Query: 286 QTKFKGMKSYISYKLVPTHTQVPVHRRYKHFDWLYARLAEKF-PVISVPHLPEKQATGRF 344
+K G+KSYI Y+L PT+T V+ RYKHFDWLY RL KF I +P LP+KQ TGRF
Sbjct: 260 GSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGRF 319
Query: 345 EEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVG 404
EE+FI R + L WM M HPV+++ +VFQ FL + DEK WK GKRKAE+DE+ G
Sbjct: 320 EEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFL---NFRDEKEWKTGKRKAERDELAG 376
Query: 405 ANFFLTLSTPPAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEY 464
F T+ P A LDL E+E K + FTK MDD +L E ++ KEY
Sbjct: 377 VMIFSTME-PEAPDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEY 435
Query: 465 QKVGQSFRGLSQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLAL 524
QK+G++ + L+ F LN AI G Y+ I L AEQP++DL +M+
Sbjct: 436 QKIGKALQSLATVFSSSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHE 495
Query: 525 YQGHLANFPDIIHVQKG 541
Y+G L FPDII KG
Sbjct: 496 YKGFLGCFPDIIGTHKG 512
>gi|153791707 sorting nexin family member 30 [Homo sapiens]
Length = 437
Score = 70.9 bits (172), Expect = 3e-12
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 16/124 (12%)
Query: 280 IDDPTKQTKFKGMKSYISYKLVPTHTQVP-------VHRRYKHFDWLYARLAEKFPVISV 332
+DDP K M++YI+Y++ T+V V RRY+ FDWL ++L E P +
Sbjct: 95 VDDPKKHVCT--METYITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLI 152
Query: 333 PHLPE----KQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDEK 388
P LPE K RF E+F+ RRK L ++ + HPVL+ + F FLT + D
Sbjct: 153 PPLPEKFVVKGVVDRFSEEFVETRRKALDKFLKRITDHPVLSFNEHFNIFLT---AKDLN 209
Query: 389 AWKQ 392
A+K+
Sbjct: 210 AYKK 213
>gi|23111055 sorting nexin 7 isoform b [Homo sapiens]
Length = 336
Score = 67.4 bits (163), Expect = 4e-11
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 279 TIDDPTKQTKFKGMKSYISYKLVPT-------HTQVPVHRRYKHFDWLYARLAEKFPVIS 331
T+D+P ++ ++++I+Y+++ ++ V RRY+ F WL +L E P +
Sbjct: 35 TVDEP--ESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLI 92
Query: 332 VPHLPEK----QATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDE 387
+P LPEK RF +DFI RRK L ++N +A HP L + F+ FLT
Sbjct: 93 IPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTA------ 146
Query: 388 KAWKQGKRKAE 398
+AW+ K +
Sbjct: 147 QAWELSSHKKQ 157
>gi|194294540 sorting nexin 7 isoform a [Homo sapiens]
Length = 451
Score = 67.4 bits (163), Expect = 4e-11
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 279 TIDDPTKQTKFKGMKSYISYKLVPT-------HTQVPVHRRYKHFDWLYARLAEKFPVIS 331
T+D+P ++ ++++I+Y+++ ++ V RRY+ F WL +L E P +
Sbjct: 99 TVDEP--ESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLI 156
Query: 332 VPHLPEK----QATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDE 387
+P LPEK RF +DFI RRK L ++N +A HP L + F+ FLT
Sbjct: 157 IPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTA------ 210
Query: 388 KAWKQGKRKAE 398
+AW+ K +
Sbjct: 211 QAWELSSHKKQ 221
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 63.5 bits (153), Expect = 5e-10
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 498 DAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK 540
DA++ +GEL A QP Q+LDPVMDLL L QGH N PDIIH+ K
Sbjct: 1283 DAFNTVGELXANQPIQELDPVMDLLVLSQGHQVNIPDIIHIHK 1325
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 63.5 bits (153), Expect = 5e-10
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 498 DAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK 540
DA++ +GEL A QP Q+LDPVMDLL L QGH N PDIIH+ K
Sbjct: 1286 DAFNTVGELXANQPIQELDPVMDLLVLSQGHQVNIPDIIHIHK 1328
>gi|239745060 PREDICTED: similar to breast cancer anti-estrogen
resistance 1 [Homo sapiens]
Length = 353
Score = 59.7 bits (143), Expect = 8e-09
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 27/145 (18%)
Query: 5 ARALYDFRSENPGEISLREHEVLSLCSEQDIEG----WLEGVNSRGDRGLFPASYVQVIR 60
A+ALYD +E+P E+S R+ +++++ EQD +G WL ++ R +G+ P ++++++
Sbjct: 8 AKALYDNVAESPDELSFRKGDIMTVL-EQDTQGLDGWWLCSLHGR--QGIMPGNHLKILV 64
Query: 61 AP-EPGPAGDGGPGAPARYANVPPGGFEPLPVAP------PASFKPPPDAFQALLQPQQA 113
+ PAG G PG PA A PG P+P A P +++P PD+ + P +A
Sbjct: 65 GMYDKKPAGPG-PGPPATPAQPQPGLHAPVPPASQYTPMLPNTYQPQPDSVYLVPTPSKA 123
Query: 114 PPPSTFQPPGAGFPYGGGALQPSPQ 138
+Q PG PSPQ
Sbjct: 124 -QQGLYQVPG-----------PSPQ 136
>gi|23943858 sorting nexin 8 [Homo sapiens]
Length = 465
Score = 59.7 bits (143), Expect = 8e-09
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 14/247 (5%)
Query: 295 YISYKLVPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRK 354
++ Y++ + V+RRY F L KFP VP LP K+ G + +FI RR+
Sbjct: 92 HVEYEVSSQRFKSSVYRRYNDFVVFQEMLLHKFPYRMVPALPPKRMLGA-DREFIEARRR 150
Query: 355 GLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTP 414
L ++N +A HP+ ++ V + FL+ S + K E + VG F
Sbjct: 151 ALKRFVNLVARHPLFSEDVVLKLFLSFSGSDVQNKLK------ESAQCVGDEFLNCKLAT 204
Query: 415 PAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTG------FKKEYQKVG 468
A +++++ + + + +S +L A A + + F KE +G
Sbjct: 205 RAKDFLPADIQAQFAISRELIRNIYNSFHKLRDRAERIASRAIDNAADLLIFGKELSAIG 264
Query: 469 QSFRGLSQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGH 528
L L+ + L QA+ + + + A+Q +Q+ + V++ L L+
Sbjct: 265 SDTTPLPSWAALNSSTWG-SLKQALKGLSVEFALLADKAAQQGKQEENDVVEKLNLFLDL 323
Query: 529 LANFPDI 535
L ++ D+
Sbjct: 324 LQSYKDL 330
Score = 30.0 bits (66), Expect = 6.7
Identities = 22/63 (34%), Positives = 24/63 (38%), Gaps = 9/63 (14%)
Query: 60 RAPEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTF 119
RA +P PA G A A PPAS P P A + QQ P PS
Sbjct: 4 RAMDPLPAAAVGAAAEAEADE---------EADPPASDLPTPQAIEPQAIVQQVPAPSRM 54
Query: 120 QPP 122
Q P
Sbjct: 55 QMP 57
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 57.0 bits (136), Expect = 5e-08
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 498 DAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK 540
DA++ +GELFA QP Q+LDPVMDLL L GH DIIH+ K
Sbjct: 1335 DAFNTVGELFANQPSQELDPVMDLLVLSLGHQVIILDIIHIHK 1377
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 57.0 bits (136), Expect = 5e-08
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 498 DAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK 540
DA++ +GELFA QP Q+LDPVMDLL L GH DIIH+ K
Sbjct: 1335 DAFNTVGELFANQPSQELDPVMDLLVLSLGHQVIILDIIHIHK 1377
>gi|44662836 breast cancer anti-estrogen resistance 1 [Homo sapiens]
Length = 870
Score = 57.0 bits (136), Expect = 5e-08
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 27/145 (18%)
Query: 5 ARALYDFRSENPGEISLREHEVLSLCSEQDIEG----WLEGVNSRGDRGLFPASYVQV-I 59
A+ALYD +E+P E+S R+ +++++ EQD +G WL ++ R +G+ P + +++ +
Sbjct: 8 AKALYDNVAESPDELSFRKGDIMTVL-EQDTQGLDGWWLCSLHGR--QGIVPGNRLKILV 64
Query: 60 RAPEPGPAGDGGPGAPARYANVPPGGFEPLPVAP------PASFKPPPDAFQALLQPQQA 113
+ PAG GPG PA A PG P P A P +++P PD+ + P +A
Sbjct: 65 GMYDKKPAGP-GPGPPATPAQPQPGLHAPAPPASQYTPMLPNTYQPQPDSVYLVPTPSKA 123
Query: 114 PPPSTFQPPGAGFPYGGGALQPSPQ 138
+Q PG PSPQ
Sbjct: 124 -QQGLYQVPG-----------PSPQ 136
>gi|239756225 PREDICTED: similar to breast cancer anti-estrogen
resistance 1 [Homo sapiens]
Length = 232
Score = 55.8 bits (133), Expect = 1e-07
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 27/145 (18%)
Query: 5 ARALYDFRSENPGEISLREHEVLSLCSEQDIEG----WLEGVNSRGDRGLFPASYVQVIR 60
A+ALY +E+P E+S R+ +++++ EQD +G WL ++ R +G+ P ++++++
Sbjct: 8 AKALYVNVAESPDELSFRKGDIMTVL-EQDTQGLDGWWLCSLHGR--QGIVPGNHLKILV 64
Query: 61 AP-EPGPAGDGGPGAPARYANVPPGGFEPLPVAP------PASFKPPPDAFQALLQPQQA 113
+ PAG G PG PA A PG P+P A P +++P PD+ + P +A
Sbjct: 65 GMYDKKPAGPG-PGPPATPAQPQPGLHAPVPPASQYTPMLPNTYQPQPDSVYLVPTPSKA 123
Query: 114 PPPSTFQPPGAGFPYGGGALQPSPQ 138
+Q PG PSPQ
Sbjct: 124 -QQGLYQVPG-----------PSPQ 136
>gi|239750776 PREDICTED: similar to breast cancer anti-estrogen
resistance 1 [Homo sapiens]
Length = 224
Score = 55.8 bits (133), Expect = 1e-07
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 27/145 (18%)
Query: 5 ARALYDFRSENPGEISLREHEVLSLCSEQDIEG----WLEGVNSRGDRGLFPASYVQVIR 60
A+ALY +E+P E+S R+ +++++ EQD +G WL ++ R +G+ P ++++++
Sbjct: 8 AKALYVNVAESPDELSFRKGDIMTVL-EQDTQGLDGWWLCSLHGR--QGIVPGNHLKILV 64
Query: 61 AP-EPGPAGDGGPGAPARYANVPPGGFEPLPVAP------PASFKPPPDAFQALLQPQQA 113
+ PAG G PG PA A PG P+P A P +++P PD+ + P +A
Sbjct: 65 GMYDKKPAGPG-PGPPATPAQPQPGLHAPVPPASQYTPMLPNTYQPQPDSVYLVPTPSKA 123
Query: 114 PPPSTFQPPGAGFPYGGGALQPSPQ 138
+Q PG PSPQ
Sbjct: 124 -QQGLYQVPG-----------PSPQ 136
>gi|239745044 PREDICTED: similar to breast cancer anti-estrogen
resistance 1 [Homo sapiens]
Length = 368
Score = 55.8 bits (133), Expect = 1e-07
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 27/145 (18%)
Query: 5 ARALYDFRSENPGEISLREHEVLSLCSEQDIEG----WLEGVNSRGDRGLFPASYVQVIR 60
A+ALY +E+P E+S R+ +++++ EQD +G WL ++ R +G+ P ++++++
Sbjct: 8 AKALYVNVAESPDELSFRKGDIMTVL-EQDTQGLDGWWLCSLHGR--QGIVPGNHLKILV 64
Query: 61 AP-EPGPAGDGGPGAPARYANVPPGGFEPLPVAP------PASFKPPPDAFQALLQPQQA 113
+ PAG G PG PA A PG P+P A P +++P PD+ + P +A
Sbjct: 65 GMYDKKPAGPG-PGPPATPAQPQPGLHAPVPPASQYTPMLPNTYQPQPDSVYLVPTPSKA 123
Query: 114 PPPSTFQPPGAGFPYGGGALQPSPQ 138
+Q PG PSPQ
Sbjct: 124 -QQGLYQVPG-----------PSPQ 136
>gi|4507145 sorting nexin 4 [Homo sapiens]
Length = 450
Score = 55.1 bits (131), Expect = 2e-07
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 311 RRYKHFDWLYARLAEKFPVISVPHLPEKQA--------TGRFEEDFISKRRKGLIWWMNH 362
RRY F+ L + L +P I VP LPEK+A + DF+ +RR GL ++
Sbjct: 105 RRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLR 164
Query: 363 MASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQ 422
+ASHP+L + +F FLT + E + G + + N + P DL+
Sbjct: 165 IASHPILCRDKIFYLFLTQEGNWKETVNETGFQLKADSRLKALNATFRVKNPDKRFTDLK 224
Query: 423 EVESKI 428
++
Sbjct: 225 HYSDEL 230
>gi|19224660 protein kinase C and casein kinase substrate in neurons
3 [Homo sapiens]
Length = 424
Score = 53.1 bits (126), Expect = 7e-07
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 3 LRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIRA 61
+R RALYD+ + E+S R E L SE+D +GW +G G GL+PA+YV+ + A
Sbjct: 366 VRVRALYDYAGQEADELSFRAGEELLKMSEEDEQGWCQGQLQSGRIGLYPANYVECVGA 424
>gi|223468657 SH3-domain GRB2-like 3 [Homo sapiens]
Length = 347
Score = 50.8 bits (120), Expect = 4e-06
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 6 RALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVI 59
R LYDF EN GE+ +E ++++L ++ D E W EG+ G+ G FP +YV+VI
Sbjct: 291 RGLYDFEPENQGELGFKEGDIITLTNQID-ENWYEGM-IHGESGFFPINYVEVI 342
>gi|4506931 SH3-domain GRB2-like 2 [Homo sapiens]
Length = 352
Score = 50.4 bits (119), Expect = 5e-06
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 6 RALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIRA 61
RALYDF EN GE+ +E ++++L ++ D E W EG+ G G FP +YV+++ A
Sbjct: 296 RALYDFEPENEGELGFKEGDIITLTNQID-ENWYEGM-LHGHSGFFPINYVEILVA 349
>gi|24308229 protein kinase C and casein kinase substrate in neurons
1 [Homo sapiens]
Length = 444
Score = 50.1 bits (118), Expect = 6e-06
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 3 LRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVI 59
+R RALYD+ + E+S + + L+ E+D +GW G G GL+PA+YV+ I
Sbjct: 388 VRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI 444
>gi|148747351 protein kinase C and casein kinase substrate in
neurons 2 [Homo sapiens]
Length = 486
Score = 50.1 bits (118), Expect = 6e-06
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 3 LRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR 60
+R RALYD+ + E+S + + L+ ++D +GW +G G GL+PA+YV+ I+
Sbjct: 429 VRVRALYDYEGQEHDELSFKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPANYVEAIQ 486
>gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo
sapiens]
Length = 561
Score = 50.1 bits (118), Expect = 6e-06
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 5 ARALYDFRSENPGEISLREHEVLSLCSEQ---DIEGWLEGVNSRGDRGLFPASYVQVIRA 61
ARALYD +E+P E+S R +VL + + ++GW + G +G+ PA+ V+++ A
Sbjct: 10 ARALYDNTAESPQELSFRRGDVLRVLQREGAGGLDGWCL-CSLHGQQGIVPANRVKLLPA 68
Query: 62 PEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQP 121
GPA P P A P S P PD + PPP+
Sbjct: 69 ---GPA--------------PKPSLSPASPAQPGSPYPAPDHSNEDQEVYVVPPPAR-PC 110
Query: 122 PGAGFPYGGGALQPSPQQLY 141
P +G P G PSP +Y
Sbjct: 111 PTSGPP--AGPCPPSPDLIY 128
>gi|4506929 SH3-domain GRB2-like 1 [Homo sapiens]
Length = 368
Score = 50.1 bits (118), Expect = 6e-06
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 6 RALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVI 59
+ALYDF EN GE+ E +V++L ++ D E W EG+ G G FP SYV+V+
Sbjct: 312 KALYDFEPENDGELGFHEGDVITLTNQID-ENWYEGMLD-GQSGFFPLSYVEVL 363
>gi|23111036 sorting nexin 1 isoform c [Homo sapiens]
Length = 474
Score = 49.7 bits (117), Expect = 8e-06
Identities = 72/291 (24%), Positives = 113/291 (38%), Gaps = 61/291 (20%)
Query: 268 EWQENPYPFQCTIDDPTKQTKFKGMKSYISYKLVPTHTQVP--------VHRRYKHFDWL 319
E QE+ + I DP K GM +Y++YK V T T +P V RR+ F L
Sbjct: 137 EEQEDQFDLTVGITDPEKIGD--GMNAYVAYK-VTTQTSLPLFRSKQFAVKRRFSDFLGL 193
Query: 320 YARLAEKFPV--ISVPHLPEKQATGRFE----------EDFISKRRKGLIWWMNHMASHP 367
Y +L+EK VP PEK G + +F+ KRR L ++ + +HP
Sbjct: 194 YEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHP 253
Query: 368 VLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQEVESK 427
+ Q + FL EK+E+ A TLS A L L+
Sbjct: 254 TMLQDPDVREFL------------------EKEELPRAVGTQTLS---GAGL-LKMFNKA 291
Query: 428 IDGFKCFTKKMDDSALQLNHTANEFARKQ------------VTGFKKEYQ-KVGQSFRGL 474
D T KM++S + E ++ + +KE Q + L
Sbjct: 292 TDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSL 351
Query: 475 SQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALY 525
+ L + L++A++ + + I +L EQ D + +LL+ Y
Sbjct: 352 AM---LGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDY 399
>gi|23111034 sorting nexin 1 isoform a [Homo sapiens]
Length = 522
Score = 49.7 bits (117), Expect = 8e-06
Identities = 72/291 (24%), Positives = 113/291 (38%), Gaps = 61/291 (20%)
Query: 268 EWQENPYPFQCTIDDPTKQTKFKGMKSYISYKLVPTHTQVP--------VHRRYKHFDWL 319
E QE+ + I DP K GM +Y++YK V T T +P V RR+ F L
Sbjct: 137 EEQEDQFDLTVGITDPEKIGD--GMNAYVAYK-VTTQTSLPLFRSKQFAVKRRFSDFLGL 193
Query: 320 YARLAEKFPV--ISVPHLPEKQATGRFE----------EDFISKRRKGLIWWMNHMASHP 367
Y +L+EK VP PEK G + +F+ KRR L ++ + +HP
Sbjct: 194 YEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHP 253
Query: 368 VLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQEVESK 427
+ Q + FL EK+E+ A TLS A L L+
Sbjct: 254 TMLQDPDVREFL------------------EKEELPRAVGTQTLS---GAGL-LKMFNKA 291
Query: 428 IDGFKCFTKKMDDSALQLNHTANEFARKQ------------VTGFKKEYQ-KVGQSFRGL 474
D T KM++S + E ++ + +KE Q + L
Sbjct: 292 TDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSL 351
Query: 475 SQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALY 525
+ L + L++A++ + + I +L EQ D + +LL+ Y
Sbjct: 352 AM---LGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDY 399
>gi|23111026 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 49.7 bits (117), Expect = 8e-06
Identities = 41/136 (30%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 268 EWQENPYPFQCTIDDPTKQTKFKGMKSYISYKLVPTHTQVP--------VHRRYKHFDWL 319
E QE + DP Q + SY+ YK+ HT V RRY+ F WL
Sbjct: 9 ENQEQEEVITVRVQDPRVQNE-GSWNSYVDYKIF-LHTNSKAFTAKTSCVRRRYREFVWL 66
Query: 320 YARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFL 379
+L ++ VP LP K ++FI KRR+GL ++ + VL FL
Sbjct: 67 RKQLQRNAGLVPVPELPGKSTFFGTSDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFL 126
Query: 380 TCPSSTDE-KAWKQGK 394
S E +A QG+
Sbjct: 127 QSQLSVPEIEACVQGR 142
>gi|23111028 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 49.7 bits (117), Expect = 8e-06
Identities = 41/136 (30%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 268 EWQENPYPFQCTIDDPTKQTKFKGMKSYISYKLVPTHTQVP--------VHRRYKHFDWL 319
E QE + DP Q + SY+ YK+ HT V RRY+ F WL
Sbjct: 9 ENQEQEEVITVRVQDPRVQNE-GSWNSYVDYKIF-LHTNSKAFTAKTSCVRRRYREFVWL 66
Query: 320 YARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFL 379
+L ++ VP LP K ++FI KRR+GL ++ + VL FL
Sbjct: 67 RKQLQRNAGLVPVPELPGKSTFFGTSDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFL 126
Query: 380 TCPSSTDE-KAWKQGK 394
S E +A QG+
Sbjct: 127 QSQLSVPEIEACVQGR 142
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,316,462
Number of Sequences: 37866
Number of extensions: 1752568
Number of successful extensions: 11823
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 720
Number of HSP's that attempted gapping in prelim test: 8179
Number of HSP's gapped (non-prelim): 3243
length of query: 628
length of database: 18,247,518
effective HSP length: 108
effective length of query: 520
effective length of database: 14,157,990
effective search space: 7362154800
effective search space used: 7362154800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.