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Search of human proteins with 156616299
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156616299 tubulin, gamma complex associated protein 5
isoform b [Homo sapiens]
(1024 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156616299 tubulin, gamma complex associated protein 5 isoform... 2075 0.0
gi|156616297 tubulin, gamma complex associated protein 5 isoform... 2045 0.0
gi|56788364 tubulin, gamma complex associated protein 6 [Homo sa... 100 5e-21
gi|5453660 tubulin, gamma complex associated protein 3 [Homo sap... 80 1e-14
gi|5729840 tubulin, gamma complex associated protein 2 [Homo sap... 52 2e-06
gi|38454194 tubulin, gamma complex associated protein 4 [Homo sa... 49 3e-05
gi|31377468 dedicator of cytokinesis 2 [Homo sapiens] 37 0.12
gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens] 33 1.1
gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens] 33 1.1
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 33 1.8
gi|150378498 fragile site-associated protein [Homo sapiens] 32 2.3
gi|23238244 sorting nexin 16 isoform a [Homo sapiens] 32 4.0
gi|23238246 sorting nexin 16 isoform a [Homo sapiens] 32 4.0
gi|23238248 sorting nexin 16 isoform b [Homo sapiens] 32 4.0
gi|31377765 transmembrane protein 87A isoform 1 [Homo sapiens] 32 4.0
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 31 5.2
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 31 5.2
gi|33188443 microfilament and actin filament cross-linker protei... 31 5.2
gi|33188445 microfilament and actin filament cross-linker protei... 31 5.2
gi|39725952 angiogenic factor VG5Q [Homo sapiens] 31 5.2
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 5.2
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 5.2
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 5.2
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 5.2
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 5.2
gi|221219020 NYD-SP11 protein [Homo sapiens] 31 6.8
gi|194097442 protein tyrosine phosphatase, receptor type, N poly... 31 6.8
gi|194097440 protein tyrosine phosphatase, receptor type, N poly... 31 6.8
gi|194097438 protein tyrosine phosphatase, receptor type, N poly... 31 6.8
gi|153945755 zinc finger protein 608 [Homo sapiens] 31 6.8
>gi|156616299 tubulin, gamma complex associated protein 5 isoform b
[Homo sapiens]
Length = 1024
Score = 2075 bits (5376), Expect = 0.0
Identities = 1024/1024 (100%), Positives = 1024/1024 (100%)
Query: 1 MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK 60
MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK
Sbjct: 1 MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK 60
Query: 61 IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS 120
IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS
Sbjct: 61 IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS 120
Query: 121 PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE 180
PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE
Sbjct: 121 PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE 180
Query: 181 DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS 240
DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS
Sbjct: 181 DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS 240
Query: 241 NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI 300
NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI
Sbjct: 241 NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI 300
Query: 301 IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT 360
IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT
Sbjct: 301 IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT 360
Query: 361 YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV 420
YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV
Sbjct: 361 YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV 420
Query: 421 AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI 480
AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI
Sbjct: 421 AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI 480
Query: 481 VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG 540
VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG
Sbjct: 481 VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG 540
Query: 541 PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV 600
PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV
Sbjct: 541 PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV 600
Query: 601 QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF 660
QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF
Sbjct: 601 QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF 660
Query: 661 HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL 720
HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL
Sbjct: 661 HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL 720
Query: 721 QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS 780
QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS
Sbjct: 721 QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS 780
Query: 781 FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV 840
FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV
Sbjct: 781 FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV 840
Query: 841 LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY 900
LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY
Sbjct: 841 LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY 900
Query: 901 IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL 960
IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL
Sbjct: 901 IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL 960
Query: 961 ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHCEYIMLKYFYL 1020
ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHCEYIMLKYFYL
Sbjct: 961 ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHCEYIMLKYFYL 1020
Query: 1021 CISL 1024
CISL
Sbjct: 1021 CISL 1024
>gi|156616297 tubulin, gamma complex associated protein 5 isoform a
[Homo sapiens]
Length = 1024
Score = 2045 bits (5299), Expect = 0.0
Identities = 1011/1015 (99%), Positives = 1012/1015 (99%)
Query: 1 MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK 60
MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK
Sbjct: 1 MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK 60
Query: 61 IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS 120
IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS
Sbjct: 61 IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS 120
Query: 121 PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE 180
PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE
Sbjct: 121 PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE 180
Query: 181 DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS 240
DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS
Sbjct: 181 DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS 240
Query: 241 NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI 300
NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI
Sbjct: 241 NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI 300
Query: 301 IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT 360
IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT
Sbjct: 301 IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT 360
Query: 361 YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV 420
YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV
Sbjct: 361 YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV 420
Query: 421 AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI 480
AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI
Sbjct: 421 AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI 480
Query: 481 VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG 540
VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG
Sbjct: 481 VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG 540
Query: 541 PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV 600
PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV
Sbjct: 541 PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV 600
Query: 601 QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF 660
QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF
Sbjct: 601 QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF 660
Query: 661 HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL 720
HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL
Sbjct: 661 HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL 720
Query: 721 QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS 780
QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS
Sbjct: 721 QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS 780
Query: 781 FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV 840
FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV
Sbjct: 781 FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV 840
Query: 841 LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY 900
LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY
Sbjct: 841 LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY 900
Query: 901 IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL 960
IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL
Sbjct: 901 IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL 960
Query: 961 ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHCEYIML 1015
ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPH E + L
Sbjct: 961 ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHLESLAL 1015
>gi|56788364 tubulin, gamma complex associated protein 6 [Homo
sapiens]
Length = 1819
Score = 100 bits (250), Expect = 5e-21
Identities = 96/337 (28%), Positives = 146/337 (43%), Gaps = 49/337 (14%)
Query: 705 NLMQTLKKDYRLVE-----YLQAMRNFFLMEGGDTMYDFYTSIFDKIREKET---WQNVS 756
+L+ DY VE + +A+R+F LME G+ +F+K+ +T N
Sbjct: 1497 SLVNKAAVDYFFVELHLEAHYEALRHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLNPL 1556
Query: 757 FLNVQLQEAVGQRYPEDSSRLSISFENVDTAKKKLPV-------HILDGLTLSYKVPWPV 809
LN L +A+ D+ S N+ A K LP +L L L YKV WP+
Sbjct: 1557 VLNSVLSKALQCSLHGDTPHAS----NLSLALKYLPEVFAPNAPDVLSCLELRYKVDWPL 1612
Query: 810 DIVISLECQKIYNQVFLLLLQIKWAKYSLDVLLFGELVSTAEKPRLKEGLIHEQDTVAQF 869
+IVI+ C Y+ VF LLQ+K ++L + F L TA L H +V
Sbjct: 1613 NIVITEGCLSKYSGVFSFLLQLKLMMWALKDVCF-HLKRTAL-------LSHMAGSV--- 1661
Query: 870 GPQKEPVRQQIHRMFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQLIKI 929
Q ++ L + ++ HFV + YI +ILH T EF+ ++ DL+++ +
Sbjct: 1662 ---------QFRQLQLFKHEMQHFVKVIQGYIANQILHVTWCEFRARLATVGDLEEIQRA 1712
Query: 930 HYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMFAD----------GWQAGLGTWRMES 979
H YL R LL EK + V I + +L L F G G
Sbjct: 1713 HAEYLHKAVFRGLLTEKAAPVMNVIHSIFSLVLKFRSQLISQAWGPPGGPRGAEHPNFAL 1772
Query: 980 IEKMESDFKNCHMFLVTILNKAVCRGSFPHCEYIMLK 1016
+++ + FK FL ++ K V RG PH E +L+
Sbjct: 1773 MQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLR 1809
Score = 58.5 bits (140), Expect = 3e-08
Identities = 73/320 (22%), Positives = 127/320 (39%), Gaps = 51/320 (15%)
Query: 263 VLVTETQVIRETLWLLSGVKKLFIFQLIDGK--VTVRNNIIVTHLTHSCLRSVLEQIAAY 320
VLV E +++++ L +L GV F L V+ + V+ + + S+L ++A Y
Sbjct: 345 VLVKECELVKDVLNVLIGVVSA-TFSLCQPAQAFVVKRGVHVSGASPESISSLLSEVAEY 403
Query: 321 GQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRTYQAFMWALYKYFISFKEELA 380
G RL F S+ P S+ K +QAF L +Y ++
Sbjct: 404 GTCYTRLSHF----------SLQPVLDSLYSKGL-----VFQAFTSGLRRYLQYYRA--- 445
Query: 381 EIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGVAEVPPDTRNVVRASHLLNTL 440
C+++ T++L + QL+ L ++ G A +P RA+
Sbjct: 446 ----CVLSTPPTLSLLTIGFLFKKLGRQLRYLAELCGVG-AVLPGTCGGGPRAAFPTGVK 500
Query: 441 YKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWIVHGHLWDGAREFIIQRNKNV 500
+ L + + S + +L SL + PY + + +W+ G D EF+IQ N
Sbjct: 501 LLSYLYQEALHNCSNEHYPVLLSLLKTSCEPYTRFIHDWVYSGVFRDAYGEFMIQVNHEY 560
Query: 501 PVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQGPSSRQHTMVSFLKPVLKQII 560
++ RD Y T+ +S++ E+ + FLK + I
Sbjct: 561 -LSFRDKLYWTHGYVLISKEVED-----------------------CVPVFLKHIAHDIY 596
Query: 561 MAGKSMQLLKNLQCAESTTC 580
+ GK++ LLK L C C
Sbjct: 597 VCGKTINLLK-LCCPRHYLC 615
>gi|5453660 tubulin, gamma complex associated protein 3 [Homo
sapiens]
Length = 907
Score = 79.7 bits (195), Expect = 1e-14
Identities = 87/343 (25%), Positives = 142/343 (41%), Gaps = 37/343 (10%)
Query: 610 STPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLL---AINFARMYLEQSDFHEKFAG 666
S P V T++ + ++ +S+ S + +D LL +INF K
Sbjct: 450 SDPTVKTDRLWHDKYTLR-KSMIPSFMTMDQSRKVLLIGKSINFLHQVCHDQTPTTKM-- 506
Query: 667 GDVCVDRSSESVTCQTFELT-LRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYLQAMRN 725
+ V +S+ES T L + ID Y + L+ L K Y L++++QAMR
Sbjct: 507 --IAVTKSAESPQDAADLFTDLENAFQGKIDAAYFETSKYLLDVLNKKYSLLDHMQAMRR 564
Query: 726 FFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRY-----PEDSSRLSIS 780
+ L+ GD + + ++ T L L+ AV PE RL +
Sbjct: 565 YLLLGQGDFIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFDSPEILRRLDVR 624
Query: 781 FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV 840
V V LD Y V P+ V + EC Y +VF L + K +Y L
Sbjct: 625 LLEVSPGDTGWDVFSLD-----YHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTD 679
Query: 841 LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY 900
+ G + + +L + P+ V Q H +L +++HF++ + Y
Sbjct: 680 IRKGHMCNA----KLLRNM-----------PEFSGVLHQCH---ILASEMVHFIHQMQYY 721
Query: 901 IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLL 943
I +L + E ++V++A+DLD +I H +L TI RCLL
Sbjct: 722 ITFEVLECSWDELWNKVQQAQDLDHIIAAHEVFLDTIISRCLL 764
>gi|5729840 tubulin, gamma complex associated protein 2 [Homo
sapiens]
Length = 902
Score = 52.4 bits (124), Expect = 2e-06
Identities = 61/327 (18%), Positives = 126/327 (38%), Gaps = 51/327 (15%)
Query: 671 VDRSSESVTCQTFE---LTLRSCLY-PHIDKQYLDCCGNLMQTLKKDYRLVEYLQAMRNF 726
V VTC + TL+ Y I+K + L+ L ++ LV +L++++ +
Sbjct: 460 VRECGHDVTCPVAKEIIYTLKERAYVEQIEKAFNYASKVLLDFLMEEKELVAHLRSIKRY 519
Query: 727 FLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQR---------------YP 771
FLM+ GD F +++R+ L L+ A+ P
Sbjct: 520 FLMDQGDFFVHFMDLAEEELRKPVEDITPPRLEALLELALRMSTANTDPFKDDLKIDLMP 579
Query: 772 EDSSRLSISFENVDTAKKKLPVHI---------LDGLTLSYKVPWPVDIVISLECQKIYN 822
D + ++T ++K H L+ + Y V WP+ ++I+ + Y
Sbjct: 580 HDLITQLLRVLAIETKQEKAMAHADPTELALSGLEAFSFDYIVKWPLSLIINRKALTRYQ 639
Query: 823 QVFLLLLQIKWAKYSLDVLLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHR 882
+F + K + L + + K+ +H Q
Sbjct: 640 MLFRHMFYCKHVERQLCSVWISNKTA-------KQHSLHS--------------AQWFAG 678
Query: 883 MFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCL 942
F LR ++++FV ++ Y+M ++ T + ++ A ++D ++ H +L T C+
Sbjct: 679 AFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHTGFLDTCLKDCM 738
Query: 943 LREKVSFVKEAIMKVLNLALMFADGWQ 969
L + + K++++ +MF + Q
Sbjct: 739 LTNPE--LLKVFSKLMSVCVMFTNCMQ 763
Score = 40.4 bits (93), Expect = 0.009
Identities = 53/288 (18%), Positives = 112/288 (38%), Gaps = 62/288 (21%)
Query: 367 ALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGVAEVPPD 426
A Y F EE + E +N+ + +V + +SQL+ LH+ + ++
Sbjct: 268 ASYSAVTRFIEEKSSFEYGQVNHALAAAMRTLVKEHLILVSQLEQLHRQGLLSLQKLWFY 327
Query: 427 TRNVVRASHLLNTLYKAILEYDNVGEAS--------------EQTVSLLFSLWVETVRPY 472
+ +R +L +L ++ + + +G ++ Q L L PY
Sbjct: 328 IQPAMRTMDILASLATSVDKGECLGGSTLSLLHDRSFSYTGDSQAQELCLYLTKAASAPY 387
Query: 473 LQTVDEWIVHGHLWDGAREFIIQ----RNKNVPVNHRD-FWYATYTLYSVSEKTENEEKM 527
+ +++WI G + D EF+++ R + + ++ D +W YT+
Sbjct: 388 FEVLEKWIYRGIIHDPYSEFMVEEHELRKERIQEDYNDKYWDQRYTIV------------ 435
Query: 528 SDNASASSGSDQGPSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDA 587
Q + SFL+ + +I+ GK + +++ +C TC
Sbjct: 436 -----------------QQQIPSFLQKMADKILSTGKYLNVVR--ECGHDVTCPVA---- 472
Query: 588 ERKSLYTL----FLESVQSRLRHGEDSTPQVLTEQQATKENLMKMQSI 631
++ +YTL ++E ++ + L E+ KE + ++SI
Sbjct: 473 -KEIIYTLKERAYVEQIEKAFNYASKVLLDFLMEE---KELVAHLRSI 516
>gi|38454194 tubulin, gamma complex associated protein 4 [Homo
sapiens]
Length = 666
Score = 48.5 bits (114), Expect = 3e-05
Identities = 54/288 (18%), Positives = 115/288 (39%), Gaps = 44/288 (15%)
Query: 705 NLMQTLKKDYRLVEYLQAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQE 764
+L + + ++ L+ L+ +++F+L+ G+ F + ++ T +NV Q+
Sbjct: 339 HLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQ 398
Query: 765 AVGQRYPEDSSRLSISFENVD-------------------TAKKKLPVHILDGLTLSYKV 805
+ + +D + L + ++ T+ ++ P L LSYKV
Sbjct: 399 SAHKVLLDDDNLLPLLHLTIEYHGKEHKDATQAREGPSRETSPREAPASGWAALGLSYKV 458
Query: 806 PWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDVLLFGELVSTAEKPRLKEGLIHEQDT 865
WP+ I+ + + YN VF LL ++ + L ++ ++ LK ++ D
Sbjct: 459 QWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQM----QRKHLKS---NQTDA 511
Query: 866 VAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQ 925
+ + LR + V++L Y+ +L S + HQ+ +D +
Sbjct: 512 I----------------KWRLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFES 555
Query: 926 LIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMFADGWQAGLG 973
+ H +LS + + + K F + ++L+L F LG
Sbjct: 556 IRLAHDHFLSNLLAQSFILLKPVF--HCLNEILDLCHSFCSLVSQNLG 601
>gi|31377468 dedicator of cytokinesis 2 [Homo sapiens]
Length = 1830
Score = 36.6 bits (83), Expect = 0.12
Identities = 34/166 (20%), Positives = 69/166 (41%), Gaps = 12/166 (7%)
Query: 622 KENLMKMQSIAESHL----ELDDVHDPLLAINFARMYLEQSDFHEKFAGGDVCVDRSSES 677
K+ + M I +S+L E D+ P++ + ++ D + CV+ +
Sbjct: 833 KQKVQSMNEIVQSNLFKKQECRDILLPVITKELKELLEQKDDMQHQVLERKYCVELLNSI 892
Query: 678 VTCQTFELTLRSCLYPHIDK---QYLDCCGNLMQTLKKDYRLVEYLQAMRNFFLMEGGDT 734
+ +++ + Y HI + Q L + T+ +D+ L+ + A L + GD
Sbjct: 893 LEVLSYQDA--AFTYHHIQEIMVQLLRTVNRTVITMGRDHILISHFVACMTAILNQMGDQ 950
Query: 735 MYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQR-YPEDSSRLSI 779
Y FY F E + +F + ++ +G+ YP D +S+
Sbjct: 951 HYSFYIETFQTSSELVDFLMETF--IMFKDLIGKNVYPGDWMAMSM 994
>gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens]
Length = 981
Score = 33.5 bits (75), Expect = 1.1
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 94 APLPSIKEIKTDAHYSILSLLLCLSDSPSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEM 153
A +PS + S L ++ L +++ T R+++ K+++ DW +
Sbjct: 854 AVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHRRTMRDQDTGKENEMDWDDSALTITVN 913
Query: 154 DIGPYMDTPNWSEESEEENDQQPL-SREDSGIQVDRTPLEEQDQNRKLDP 202
+ Y D + EE EEE +++ E+ I + E+++ + DP
Sbjct: 914 PMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGDP 963
>gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens]
Length = 971
Score = 33.5 bits (75), Expect = 1.1
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 94 APLPSIKEIKTDAHYSILSLLLCLSDSPSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEM 153
A +PS + S L ++ L +++ T R+++ K+++ DW +
Sbjct: 844 AVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHRRTMRDQDTGKENEMDWDDSALTITVN 903
Query: 154 DIGPYMDTPNWSEESEEENDQQPL-SREDSGIQVDRTPLEEQDQNRKLDP 202
+ Y D + EE EEE +++ E+ I + E+++ + DP
Sbjct: 904 PMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGDP 953
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 32.7 bits (73), Expect = 1.8
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 19/79 (24%)
Query: 123 NSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDS 182
N ++E N E E++++ E+EE D EESEEE +++ S
Sbjct: 521 NKVHIEVKENPEEEEEEE--------EEEEED-----------EESEEEEEEEGESEGSE 561
Query: 183 GIQVDRTPLEEQDQNRKLD 201
G + D +E+D + LD
Sbjct: 562 GDEEDEKVSDEKDSGKTLD 580
>gi|150378498 fragile site-associated protein [Homo sapiens]
Length = 5005
Score = 32.3 bits (72), Expect = 2.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 144 GKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSGIQ 185
G +M+ ++DI YMD P E EEN + +S ED +Q
Sbjct: 282 GFVVMQSNDVDIYYYMDEPGLVPEETEENIEGEMSSEDCKLQ 323
>gi|23238244 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 31.6 bits (70), Expect = 4.0
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 22/147 (14%)
Query: 92 LNAPLPSIKEIKTDAHYSILSLLLCLSDSPSNSSYVETPR-------------NKEV-EK 137
L A L ++ K A+ + LCL D P +E R KE+ EK
Sbjct: 188 LQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRLQKELLEK 247
Query: 138 KDDFDWGKYLMEDEEMDIGPYMDT-------PNWSEESEEENDQQPLSREDSGIQVDRTP 190
+ + + K L+ ++++ I + P S + E +Q L E S ++VD+
Sbjct: 248 QKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQDV 307
Query: 191 LEEQDQNRKLDPCISWKDEPDDRSWLE 217
L+E+ + PC+S+ + + S +E
Sbjct: 308 LDEESRADN-KPCLSFSEPENAVSEIE 333
>gi|23238246 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 31.6 bits (70), Expect = 4.0
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 22/147 (14%)
Query: 92 LNAPLPSIKEIKTDAHYSILSLLLCLSDSPSNSSYVETPR-------------NKEV-EK 137
L A L ++ K A+ + LCL D P +E R KE+ EK
Sbjct: 188 LQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRLQKELLEK 247
Query: 138 KDDFDWGKYLMEDEEMDIGPYMDT-------PNWSEESEEENDQQPLSREDSGIQVDRTP 190
+ + + K L+ ++++ I + P S + E +Q L E S ++VD+
Sbjct: 248 QKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQDV 307
Query: 191 LEEQDQNRKLDPCISWKDEPDDRSWLE 217
L+E+ + PC+S+ + + S +E
Sbjct: 308 LDEESRADN-KPCLSFSEPENAVSEIE 333
>gi|23238248 sorting nexin 16 isoform b [Homo sapiens]
Length = 315
Score = 31.6 bits (70), Expect = 4.0
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 22/147 (14%)
Query: 92 LNAPLPSIKEIKTDAHYSILSLLLCLSDSPSNSSYVETPR-------------NKEV-EK 137
L A L ++ K A+ + LCL D P +E R KE+ EK
Sbjct: 159 LQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRLQKELLEK 218
Query: 138 KDDFDWGKYLMEDEEMDIGPYMDT-------PNWSEESEEENDQQPLSREDSGIQVDRTP 190
+ + + K L+ ++++ I + P S + E +Q L E S ++VD+
Sbjct: 219 QKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQDV 278
Query: 191 LEEQDQNRKLDPCISWKDEPDDRSWLE 217
L+E+ + PC+S+ + + S +E
Sbjct: 279 LDEESRADN-KPCLSFSEPENAVSEIE 304
>gi|31377765 transmembrane protein 87A isoform 1 [Homo sapiens]
Length = 555
Score = 31.6 bits (70), Expect = 4.0
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 165 SEESEEENDQQPLSREDSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHV 220
SEE EE+ ++P+ +E R+ +E + N K++ K + DD W+E +V
Sbjct: 475 SEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVN-----KAQEDDLKWVEENV 525
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 31.2 bits (69), Expect = 5.2
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)
Query: 75 HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
+SD KA+ W R E F L +KE K + +LS L +SDS +
Sbjct: 210 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 268
Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
SS E+ E E+++ E+EE + G + SEESEEE +++ E++G
Sbjct: 269 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 313
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 31.2 bits (69), Expect = 5.2
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)
Query: 75 HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
+SD KA+ W R E F L +KE K + +LS L +SDS +
Sbjct: 220 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 278
Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
SS E+ E E+++ E+EE + G + SEESEEE +++ E++G
Sbjct: 279 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 323
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 31.2 bits (69), Expect = 5.2
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 44 AWSNFRFHRFLDVNSHKIEKTIEGIYEKFVIHSDLSKAASWKRLTEE 90
A SN F L+ NS KI+K E + V + + +A +WK++ EE
Sbjct: 2942 AESNKAFLAELEQNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEE 2988
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 31.2 bits (69), Expect = 5.2
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 44 AWSNFRFHRFLDVNSHKIEKTIEGIYEKFVIHSDLSKAASWKRLTEE 90
A SN F L+ NS KI+K E + V + + +A +WK++ EE
Sbjct: 2440 AESNKAFLAELEQNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEE 2486
>gi|39725952 angiogenic factor VG5Q [Homo sapiens]
Length = 714
Score = 31.2 bits (69), Expect = 5.2
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 121 PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE 180
P++ + +E+P ++ + F K + D E + G D+ E + ++ E
Sbjct: 336 PTSGNTIESPLHENISNSTSFKDEKIMETDSEPEEGEITDSQTEDSYDEAITSEGNVTAE 395
Query: 181 DSGIQVDRTPLEEQDQNRKLDPCI 204
DS E++D+++ PCI
Sbjct: 396 DS---------EDEDEDKIWPPCI 410
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 31.2 bits (69), Expect = 5.2
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)
Query: 75 HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
+SD KA+ W R E F L +KE K + +LS L +SDS +
Sbjct: 211 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 269
Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
SS E+ E E+++ E+EE + G + SEESEEE +++ E++G
Sbjct: 270 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 314
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 31.2 bits (69), Expect = 5.2
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)
Query: 75 HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
+SD KA+ W R E F L +KE K + +LS L +SDS +
Sbjct: 220 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 278
Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
SS E+ E E+++ E+EE + G + SEESEEE +++ E++G
Sbjct: 279 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 323
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 31.2 bits (69), Expect = 5.2
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)
Query: 75 HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
+SD KA+ W R E F L +KE K + +LS L +SDS +
Sbjct: 188 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 246
Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
SS E+ E E+++ E+EE + G + SEESEEE +++ E++G
Sbjct: 247 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 291
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 31.2 bits (69), Expect = 5.2
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)
Query: 75 HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
+SD KA+ W R E F L +KE K + +LS L +SDS +
Sbjct: 177 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 235
Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
SS E+ E E+++ E+EE + G + SEESEEE +++ E++G
Sbjct: 236 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 280
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 31.2 bits (69), Expect = 5.2
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)
Query: 75 HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
+SD KA+ W R E F L +KE K + +LS L +SDS +
Sbjct: 222 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 280
Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
SS E+ E E+++ E+EE + G + SEESEEE +++ E++G
Sbjct: 281 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 325
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 30.8 bits (68), Expect = 6.8
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 99 IKEIKTDAHYS--ILSLLLCLSDSPSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIG 156
+ E++++ H+S + SLL L S SS E R +E E++++ + E+EE
Sbjct: 2217 VDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEE-----EVREEEEERKE 2271
Query: 157 PYMDTPNWSEESEEENDQQPLSREDSGIQVDRTPLEEQDQNRKLDPCISWKDEPDD 212
E+ EEE ++ ++ +Q EE+++ + S DE ++
Sbjct: 2272 EEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEE 2327
>gi|194097442 protein tyrosine phosphatase, receptor type, N
polypeptide 2 isoform 3 precursor [Homo sapiens]
Length = 986
Score = 30.8 bits (68), Expect = 6.8
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 492 FIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQGP 541
F+ QR +NVP N R TY V K EN SD +AS D P
Sbjct: 734 FVAQREENVPKN-RSLAVLTYDHSRVLLKAENSHSHSDYINASPIMDHDP 782
>gi|194097440 protein tyrosine phosphatase, receptor type, N
polypeptide 2 isoform 1 precursor [Homo sapiens]
Length = 1015
Score = 30.8 bits (68), Expect = 6.8
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 492 FIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQGP 541
F+ QR +NVP N R TY V K EN SD +AS D P
Sbjct: 763 FVAQREENVPKN-RSLAVLTYDHSRVLLKAENSHSHSDYINASPIMDHDP 811
>gi|194097438 protein tyrosine phosphatase, receptor type, N
polypeptide 2 isoform 2 precursor [Homo sapiens]
Length = 998
Score = 30.8 bits (68), Expect = 6.8
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 492 FIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQGP 541
F+ QR +NVP N R TY V K EN SD +AS D P
Sbjct: 746 FVAQREENVPKN-RSLAVLTYDHSRVLLKAENSHSHSDYINASPIMDHDP 794
>gi|153945755 zinc finger protein 608 [Homo sapiens]
Length = 1512
Score = 30.8 bits (68), Expect = 6.8
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 20/80 (25%)
Query: 162 PNWSEESEEENDQQPLSREDSGIQVDRTPLEEQDQNRKL------------------DPC 203
P+ ++EE Q LS +Q D ++ + ++ + DP
Sbjct: 1171 PSVPNKTEETGKSQLLSNHQQQLQADSFKAKQMENHQLIKEAVEMKSVMDSMKQTGVDPT 1230
Query: 204 ISWKDEPDDRSWLEHHVVHQ 223
+K +PD R+W HH V+Q
Sbjct: 1231 SRFKQDPDSRTW--HHYVYQ 1248
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,392,164
Number of Sequences: 37866
Number of extensions: 1688485
Number of successful extensions: 5201
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5098
Number of HSP's gapped (non-prelim): 90
length of query: 1024
length of database: 18,247,518
effective HSP length: 112
effective length of query: 912
effective length of database: 14,006,526
effective search space: 12773951712
effective search space used: 12773951712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.