Guide to the Human Genome
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Search of human proteins with 156616297

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156616297 tubulin, gamma complex associated protein 5
isoform a [Homo sapiens]
         (1024 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156616297 tubulin, gamma complex associated protein 5 isoform...  2068   0.0  
gi|156616299 tubulin, gamma complex associated protein 5 isoform...  2045   0.0  
gi|56788364 tubulin, gamma complex associated protein 6 [Homo sa...   102   2e-21
gi|5453660 tubulin, gamma complex associated protein 3 [Homo sap...    80   1e-14
gi|5729840 tubulin, gamma complex associated protein 2 [Homo sap...    52   2e-06
gi|38454194 tubulin, gamma complex associated protein 4 [Homo sa...    49   3e-05
gi|31377468 dedicator of cytokinesis 2 [Homo sapiens]                  37   0.12 
gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens]                     33   1.1  
gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens]                     33   1.1  
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa...    33   1.8  
gi|150378498 fragile site-associated protein [Homo sapiens]            32   2.3  
gi|23238244 sorting nexin 16 isoform a [Homo sapiens]                  32   4.0  
gi|23238246 sorting nexin 16 isoform a [Homo sapiens]                  32   4.0  
gi|23238248 sorting nexin 16 isoform b [Homo sapiens]                  32   4.0  
gi|31377765 transmembrane protein 87A isoform 1 [Homo sapiens]         32   4.0  
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]     31   5.2  
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]     31   5.2  
gi|33188443 microfilament and actin filament cross-linker protei...    31   5.2  
gi|33188445 microfilament and actin filament cross-linker protei...    31   5.2  
gi|39725952 angiogenic factor VG5Q [Homo sapiens]                      31   5.2  
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof...    31   5.2  
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof...    31   5.2  
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof...    31   5.2  
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof...    31   5.2  
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof...    31   5.2  
gi|221219020 NYD-SP11 protein [Homo sapiens]                           31   6.8  
gi|194097442 protein tyrosine phosphatase, receptor type, N poly...    31   6.8  
gi|194097440 protein tyrosine phosphatase, receptor type, N poly...    31   6.8  
gi|194097438 protein tyrosine phosphatase, receptor type, N poly...    31   6.8  
gi|153945755 zinc finger protein 608 [Homo sapiens]                    31   6.8  

>gi|156616297 tubulin, gamma complex associated protein 5 isoform a
            [Homo sapiens]
          Length = 1024

 Score = 2068 bits (5359), Expect = 0.0
 Identities = 1024/1024 (100%), Positives = 1024/1024 (100%)

Query: 1    MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK 60
            MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK
Sbjct: 1    MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK 60

Query: 61   IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS 120
            IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS
Sbjct: 61   IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS 120

Query: 121  PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE 180
            PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE
Sbjct: 121  PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE 180

Query: 181  DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS 240
            DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS
Sbjct: 181  DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS 240

Query: 241  NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI 300
            NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI
Sbjct: 241  NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI 300

Query: 301  IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT 360
            IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT
Sbjct: 301  IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT 360

Query: 361  YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV 420
            YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV
Sbjct: 361  YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV 420

Query: 421  AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI 480
            AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI
Sbjct: 421  AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI 480

Query: 481  VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG 540
            VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG
Sbjct: 481  VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG 540

Query: 541  PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV 600
            PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV
Sbjct: 541  PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV 600

Query: 601  QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF 660
            QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF
Sbjct: 601  QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF 660

Query: 661  HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL 720
            HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL
Sbjct: 661  HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL 720

Query: 721  QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS 780
            QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS
Sbjct: 721  QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS 780

Query: 781  FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV 840
            FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV
Sbjct: 781  FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV 840

Query: 841  LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY 900
            LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY
Sbjct: 841  LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY 900

Query: 901  IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL 960
            IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL
Sbjct: 901  IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL 960

Query: 961  ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHLESLALSLMAG 1020
            ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHLESLALSLMAG
Sbjct: 961  ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHLESLALSLMAG 1020

Query: 1021 MEQS 1024
            MEQS
Sbjct: 1021 MEQS 1024


>gi|156616299 tubulin, gamma complex associated protein 5 isoform b
            [Homo sapiens]
          Length = 1024

 Score = 2045 bits (5299), Expect = 0.0
 Identities = 1011/1015 (99%), Positives = 1012/1015 (99%)

Query: 1    MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK 60
            MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK
Sbjct: 1    MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK 60

Query: 61   IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS 120
            IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS
Sbjct: 61   IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS 120

Query: 121  PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE 180
            PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE
Sbjct: 121  PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE 180

Query: 181  DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS 240
            DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS
Sbjct: 181  DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS 240

Query: 241  NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI 300
            NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI
Sbjct: 241  NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI 300

Query: 301  IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT 360
            IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT
Sbjct: 301  IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT 360

Query: 361  YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV 420
            YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV
Sbjct: 361  YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV 420

Query: 421  AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI 480
            AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI
Sbjct: 421  AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI 480

Query: 481  VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG 540
            VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG
Sbjct: 481  VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG 540

Query: 541  PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV 600
            PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV
Sbjct: 541  PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV 600

Query: 601  QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF 660
            QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF
Sbjct: 601  QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF 660

Query: 661  HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL 720
            HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL
Sbjct: 661  HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL 720

Query: 721  QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS 780
            QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS
Sbjct: 721  QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS 780

Query: 781  FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV 840
            FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV
Sbjct: 781  FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV 840

Query: 841  LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY 900
            LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY
Sbjct: 841  LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY 900

Query: 901  IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL 960
            IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL
Sbjct: 901  IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL 960

Query: 961  ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHLESLAL 1015
            ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPH E + L
Sbjct: 961  ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHCEYIML 1015


>gi|56788364 tubulin, gamma complex associated protein 6 [Homo
            sapiens]
          Length = 1819

 Score =  102 bits (254), Expect = 2e-21
 Identities = 97/338 (28%), Positives = 146/338 (43%), Gaps = 49/338 (14%)

Query: 705  NLMQTLKKDYRLVE-----YLQAMRNFFLMEGGDTMYDFYTSIFDKIREKET---WQNVS 756
            +L+     DY  VE     + +A+R+F LME G+        +F+K+   +T     N  
Sbjct: 1497 SLVNKAAVDYFFVELHLEAHYEALRHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLNPL 1556

Query: 757  FLNVQLQEAVGQRYPEDSSRLSISFENVDTAKKKLPV-------HILDGLTLSYKVPWPV 809
             LN  L +A+      D+   S    N+  A K LP         +L  L L YKV WP+
Sbjct: 1557 VLNSVLSKALQCSLHGDTPHAS----NLSLALKYLPEVFAPNAPDVLSCLELRYKVDWPL 1612

Query: 810  DIVISLECQKIYNQVFLLLLQIKWAKYSLDVLLFGELVSTAEKPRLKEGLIHEQDTVAQF 869
            +IVI+  C   Y+ VF  LLQ+K   ++L  + F  L  TA        L H   +V   
Sbjct: 1613 NIVITEGCLSKYSGVFSFLLQLKLMMWALKDVCF-HLKRTAL-------LSHMAGSV--- 1661

Query: 870  GPQKEPVRQQIHRMFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQLIKI 929
                     Q  ++ L + ++ HFV  +  YI  +ILH T  EF+ ++    DL+++ + 
Sbjct: 1662 ---------QFRQLQLFKHEMQHFVKVIQGYIANQILHVTWCEFRARLATVGDLEEIQRA 1712

Query: 930  HYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMFAD----------GWQAGLGTWRMES 979
            H  YL     R LL EK + V   I  + +L L F            G   G        
Sbjct: 1713 HAEYLHKAVFRGLLTEKAAPVMNVIHSIFSLVLKFRSQLISQAWGPPGGPRGAEHPNFAL 1772

Query: 980  IEKMESDFKNCHMFLVTILNKAVCRGSFPHLESLALSL 1017
            +++  + FK    FL  ++ K V RG  PHLE   L +
Sbjct: 1773 MQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRI 1810



 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 73/320 (22%), Positives = 127/320 (39%), Gaps = 51/320 (15%)

Query: 263 VLVTETQVIRETLWLLSGVKKLFIFQLIDGK--VTVRNNIIVTHLTHSCLRSVLEQIAAY 320
           VLV E +++++ L +L GV     F L        V+  + V+  +   + S+L ++A Y
Sbjct: 345 VLVKECELVKDVLNVLIGVVSA-TFSLCQPAQAFVVKRGVHVSGASPESISSLLSEVAEY 403

Query: 321 GQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRTYQAFMWALYKYFISFKEELA 380
           G    RL  F          S+ P   S+  K        +QAF   L +Y   ++    
Sbjct: 404 GTCYTRLSHF----------SLQPVLDSLYSKGL-----VFQAFTSGLRRYLQYYRA--- 445

Query: 381 EIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGVAEVPPDTRNVVRASHLLNTL 440
               C+++   T++L  +         QL+ L ++   G A +P       RA+      
Sbjct: 446 ----CVLSTPPTLSLLTIGFLFKKLGRQLRYLAELCGVG-AVLPGTCGGGPRAAFPTGVK 500

Query: 441 YKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWIVHGHLWDGAREFIIQRNKNV 500
             + L  + +   S +   +L SL   +  PY + + +W+  G   D   EF+IQ N   
Sbjct: 501 LLSYLYQEALHNCSNEHYPVLLSLLKTSCEPYTRFIHDWVYSGVFRDAYGEFMIQVNHEY 560

Query: 501 PVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQGPSSRQHTMVSFLKPVLKQII 560
            ++ RD  Y T+    +S++ E+                        +  FLK +   I 
Sbjct: 561 -LSFRDKLYWTHGYVLISKEVED-----------------------CVPVFLKHIAHDIY 596

Query: 561 MAGKSMQLLKNLQCAESTTC 580
           + GK++ LLK L C     C
Sbjct: 597 VCGKTINLLK-LCCPRHYLC 615


>gi|5453660 tubulin, gamma complex associated protein 3 [Homo
           sapiens]
          Length = 907

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 87/343 (25%), Positives = 142/343 (41%), Gaps = 37/343 (10%)

Query: 610 STPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLL---AINFARMYLEQSDFHEKFAG 666
           S P V T++    +  ++ +S+  S + +D     LL   +INF            K   
Sbjct: 450 SDPTVKTDRLWHDKYTLR-KSMIPSFMTMDQSRKVLLIGKSINFLHQVCHDQTPTTKM-- 506

Query: 667 GDVCVDRSSESVTCQTFELT-LRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYLQAMRN 725
             + V +S+ES        T L +     ID  Y +    L+  L K Y L++++QAMR 
Sbjct: 507 --IAVTKSAESPQDAADLFTDLENAFQGKIDAAYFETSKYLLDVLNKKYSLLDHMQAMRR 564

Query: 726 FFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRY-----PEDSSRLSIS 780
           + L+  GD +      +  ++    T      L   L+ AV         PE   RL + 
Sbjct: 565 YLLLGQGDFIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFDSPEILRRLDVR 624

Query: 781 FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV 840
              V        V  LD     Y V  P+  V + EC   Y +VF  L + K  +Y L  
Sbjct: 625 LLEVSPGDTGWDVFSLD-----YHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTD 679

Query: 841 LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY 900
           +  G + +     +L   +           P+   V  Q H   +L  +++HF++ +  Y
Sbjct: 680 IRKGHMCNA----KLLRNM-----------PEFSGVLHQCH---ILASEMVHFIHQMQYY 721

Query: 901 IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLL 943
           I   +L  +  E  ++V++A+DLD +I  H  +L TI  RCLL
Sbjct: 722 ITFEVLECSWDELWNKVQQAQDLDHIIAAHEVFLDTIISRCLL 764


>gi|5729840 tubulin, gamma complex associated protein 2 [Homo
           sapiens]
          Length = 902

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 61/327 (18%), Positives = 126/327 (38%), Gaps = 51/327 (15%)

Query: 671 VDRSSESVTCQTFE---LTLRSCLY-PHIDKQYLDCCGNLMQTLKKDYRLVEYLQAMRNF 726
           V      VTC   +    TL+   Y   I+K +      L+  L ++  LV +L++++ +
Sbjct: 460 VRECGHDVTCPVAKEIIYTLKERAYVEQIEKAFNYASKVLLDFLMEEKELVAHLRSIKRY 519

Query: 727 FLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQR---------------YP 771
           FLM+ GD    F     +++R+         L   L+ A+                   P
Sbjct: 520 FLMDQGDFFVHFMDLAEEELRKPVEDITPPRLEALLELALRMSTANTDPFKDDLKIDLMP 579

Query: 772 EDSSRLSISFENVDTAKKKLPVHI---------LDGLTLSYKVPWPVDIVISLECQKIYN 822
            D     +    ++T ++K   H          L+  +  Y V WP+ ++I+ +    Y 
Sbjct: 580 HDLITQLLRVLAIETKQEKAMAHADPTELALSGLEAFSFDYIVKWPLSLIINRKALTRYQ 639

Query: 823 QVFLLLLQIKWAKYSLDVLLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHR 882
            +F  +   K  +  L  +      +       K+  +H                Q    
Sbjct: 640 MLFRHMFYCKHVERQLCSVWISNKTA-------KQHSLHS--------------AQWFAG 678

Query: 883 MFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCL 942
            F LR ++++FV ++  Y+M  ++  T    +  ++ A ++D ++  H  +L T    C+
Sbjct: 679 AFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHTGFLDTCLKDCM 738

Query: 943 LREKVSFVKEAIMKVLNLALMFADGWQ 969
           L      + +   K++++ +MF +  Q
Sbjct: 739 LTNPE--LLKVFSKLMSVCVMFTNCMQ 763



 Score = 40.4 bits (93), Expect = 0.009
 Identities = 53/288 (18%), Positives = 112/288 (38%), Gaps = 62/288 (21%)

Query: 367 ALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGVAEVPPD 426
           A Y     F EE +  E   +N+     +  +V +    +SQL+ LH+     + ++   
Sbjct: 268 ASYSAVTRFIEEKSSFEYGQVNHALAAAMRTLVKEHLILVSQLEQLHRQGLLSLQKLWFY 327

Query: 427 TRNVVRASHLLNTLYKAILEYDNVGEAS--------------EQTVSLLFSLWVETVRPY 472
            +  +R   +L +L  ++ + + +G ++               Q   L   L      PY
Sbjct: 328 IQPAMRTMDILASLATSVDKGECLGGSTLSLLHDRSFSYTGDSQAQELCLYLTKAASAPY 387

Query: 473 LQTVDEWIVHGHLWDGAREFIIQ----RNKNVPVNHRD-FWYATYTLYSVSEKTENEEKM 527
            + +++WI  G + D   EF+++    R + +  ++ D +W   YT+             
Sbjct: 388 FEVLEKWIYRGIIHDPYSEFMVEEHELRKERIQEDYNDKYWDQRYTIV------------ 435

Query: 528 SDNASASSGSDQGPSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDA 587
                            Q  + SFL+ +  +I+  GK + +++  +C    TC       
Sbjct: 436 -----------------QQQIPSFLQKMADKILSTGKYLNVVR--ECGHDVTCPVA---- 472

Query: 588 ERKSLYTL----FLESVQSRLRHGEDSTPQVLTEQQATKENLMKMQSI 631
            ++ +YTL    ++E ++    +        L E+   KE +  ++SI
Sbjct: 473 -KEIIYTLKERAYVEQIEKAFNYASKVLLDFLMEE---KELVAHLRSI 516


>gi|38454194 tubulin, gamma complex associated protein 4 [Homo
           sapiens]
          Length = 666

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 54/288 (18%), Positives = 115/288 (39%), Gaps = 44/288 (15%)

Query: 705 NLMQTLKKDYRLVEYLQAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQE 764
           +L + + ++  L+  L+ +++F+L+  G+    F  +    ++   T      +NV  Q+
Sbjct: 339 HLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQ 398

Query: 765 AVGQRYPEDSSRLSISFENVD-------------------TAKKKLPVHILDGLTLSYKV 805
           +  +   +D + L +    ++                   T+ ++ P      L LSYKV
Sbjct: 399 SAHKVLLDDDNLLPLLHLTIEYHGKEHKDATQAREGPSRETSPREAPASGWAALGLSYKV 458

Query: 806 PWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDVLLFGELVSTAEKPRLKEGLIHEQDT 865
            WP+ I+ +    + YN VF  LL ++  +  L      ++    ++  LK    ++ D 
Sbjct: 459 QWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQM----QRKHLKS---NQTDA 511

Query: 866 VAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQ 925
           +                 + LR  +   V++L  Y+   +L S   +  HQ+   +D + 
Sbjct: 512 I----------------KWRLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFES 555

Query: 926 LIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMFADGWQAGLG 973
           +   H  +LS +  +  +  K  F    + ++L+L   F       LG
Sbjct: 556 IRLAHDHFLSNLLAQSFILLKPVF--HCLNEILDLCHSFCSLVSQNLG 601


>gi|31377468 dedicator of cytokinesis 2 [Homo sapiens]
          Length = 1830

 Score = 36.6 bits (83), Expect = 0.12
 Identities = 34/166 (20%), Positives = 69/166 (41%), Gaps = 12/166 (7%)

Query: 622 KENLMKMQSIAESHL----ELDDVHDPLLAINFARMYLEQSDFHEKFAGGDVCVDRSSES 677
           K+ +  M  I +S+L    E  D+  P++      +  ++ D   +      CV+  +  
Sbjct: 833 KQKVQSMNEIVQSNLFKKQECRDILLPVITKELKELLEQKDDMQHQVLERKYCVELLNSI 892

Query: 678 VTCQTFELTLRSCLYPHIDK---QYLDCCGNLMQTLKKDYRLVEYLQAMRNFFLMEGGDT 734
           +   +++    +  Y HI +   Q L      + T+ +D+ L+ +  A     L + GD 
Sbjct: 893 LEVLSYQDA--AFTYHHIQEIMVQLLRTVNRTVITMGRDHILISHFVACMTAILNQMGDQ 950

Query: 735 MYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQR-YPEDSSRLSI 779
            Y FY   F    E   +   +F  +  ++ +G+  YP D   +S+
Sbjct: 951 HYSFYIETFQTSSELVDFLMETF--IMFKDLIGKNVYPGDWMAMSM 994


>gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens]
          Length = 981

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 1/110 (0%)

Query: 94  APLPSIKEIKTDAHYSILSLLLCLSDSPSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEM 153
           A +PS   +      S L  ++ L      +++  T R+++  K+++ DW    +     
Sbjct: 854 AVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHRRTMRDQDTGKENEMDWDDSALTITVN 913

Query: 154 DIGPYMDTPNWSEESEEENDQQPL-SREDSGIQVDRTPLEEQDQNRKLDP 202
            +  Y D  +  EE EEE +++     E+  I    +   E+++  + DP
Sbjct: 914 PMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGDP 963


>gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens]
          Length = 971

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 1/110 (0%)

Query: 94  APLPSIKEIKTDAHYSILSLLLCLSDSPSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEM 153
           A +PS   +      S L  ++ L      +++  T R+++  K+++ DW    +     
Sbjct: 844 AVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHRRTMRDQDTGKENEMDWDDSALTITVN 903

Query: 154 DIGPYMDTPNWSEESEEENDQQPL-SREDSGIQVDRTPLEEQDQNRKLDP 202
            +  Y D  +  EE EEE +++     E+  I    +   E+++  + DP
Sbjct: 904 PMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGDP 953


>gi|84043963 eukaryotic translation initiation factor 5B [Homo
           sapiens]
          Length = 1220

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 19/79 (24%)

Query: 123 NSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDS 182
           N  ++E   N E E++++        E+EE D           EESEEE +++  S    
Sbjct: 521 NKVHIEVKENPEEEEEEE--------EEEEED-----------EESEEEEEEEGESEGSE 561

Query: 183 GIQVDRTPLEEQDQNRKLD 201
           G + D    +E+D  + LD
Sbjct: 562 GDEEDEKVSDEKDSGKTLD 580


>gi|150378498 fragile site-associated protein [Homo sapiens]
          Length = 5005

 Score = 32.3 bits (72), Expect = 2.3
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 144 GKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSGIQ 185
           G  +M+  ++DI  YMD P    E  EEN +  +S ED  +Q
Sbjct: 282 GFVVMQSNDVDIYYYMDEPGLVPEETEENIEGEMSSEDCKLQ 323


>gi|23238244 sorting nexin 16 isoform a [Homo sapiens]
          Length = 344

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 22/147 (14%)

Query: 92  LNAPLPSIKEIKTDAHYSILSLLLCLSDSPSNSSYVETPR-------------NKEV-EK 137
           L A L ++   K  A+   +   LCL D P     +E  R              KE+ EK
Sbjct: 188 LQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRLQKELLEK 247

Query: 138 KDDFDWGKYLMEDEEMDIGPYMDT-------PNWSEESEEENDQQPLSREDSGIQVDRTP 190
           + + +  K L+ ++++ I    +        P  S +  E   +Q L  E S ++VD+  
Sbjct: 248 QKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQDV 307

Query: 191 LEEQDQNRKLDPCISWKDEPDDRSWLE 217
           L+E+ +     PC+S+ +  +  S +E
Sbjct: 308 LDEESRADN-KPCLSFSEPENAVSEIE 333


>gi|23238246 sorting nexin 16 isoform a [Homo sapiens]
          Length = 344

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 22/147 (14%)

Query: 92  LNAPLPSIKEIKTDAHYSILSLLLCLSDSPSNSSYVETPR-------------NKEV-EK 137
           L A L ++   K  A+   +   LCL D P     +E  R              KE+ EK
Sbjct: 188 LQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRLQKELLEK 247

Query: 138 KDDFDWGKYLMEDEEMDIGPYMDT-------PNWSEESEEENDQQPLSREDSGIQVDRTP 190
           + + +  K L+ ++++ I    +        P  S +  E   +Q L  E S ++VD+  
Sbjct: 248 QKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQDV 307

Query: 191 LEEQDQNRKLDPCISWKDEPDDRSWLE 217
           L+E+ +     PC+S+ +  +  S +E
Sbjct: 308 LDEESRADN-KPCLSFSEPENAVSEIE 333


>gi|23238248 sorting nexin 16 isoform b [Homo sapiens]
          Length = 315

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 22/147 (14%)

Query: 92  LNAPLPSIKEIKTDAHYSILSLLLCLSDSPSNSSYVETPR-------------NKEV-EK 137
           L A L ++   K  A+   +   LCL D P     +E  R              KE+ EK
Sbjct: 159 LQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRLQKELLEK 218

Query: 138 KDDFDWGKYLMEDEEMDIGPYMDT-------PNWSEESEEENDQQPLSREDSGIQVDRTP 190
           + + +  K L+ ++++ I    +        P  S +  E   +Q L  E S ++VD+  
Sbjct: 219 QKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQDV 278

Query: 191 LEEQDQNRKLDPCISWKDEPDDRSWLE 217
           L+E+ +     PC+S+ +  +  S +E
Sbjct: 279 LDEESRADN-KPCLSFSEPENAVSEIE 304


>gi|31377765 transmembrane protein 87A isoform 1 [Homo sapiens]
          Length = 555

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)

Query: 165 SEESEEENDQQPLSREDSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHV 220
           SEE EE+  ++P+ +E       R+  +E + N K++     K + DD  W+E +V
Sbjct: 475 SEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVN-----KAQEDDLKWVEENV 525


>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
          Length = 770

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)

Query: 75  HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
           +SD  KA+ W R       E F L      +KE K +    +LS L  +SDS      + 
Sbjct: 210 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 268

Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
           SS  E+    E E+++         E+EE + G      + SEESEEE +++    E++G
Sbjct: 269 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 313


>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
          Length = 780

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)

Query: 75  HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
           +SD  KA+ W R       E F L      +KE K +    +LS L  +SDS      + 
Sbjct: 220 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 278

Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
           SS  E+    E E+++         E+EE + G      + SEESEEE +++    E++G
Sbjct: 279 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 323


>gi|33188443 microfilament and actin filament cross-linker protein
            isoform b [Homo sapiens]
          Length = 5938

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 44   AWSNFRFHRFLDVNSHKIEKTIEGIYEKFVIHSDLSKAASWKRLTEE 90
            A SN  F   L+ NS KI+K  E +    V + +  +A +WK++ EE
Sbjct: 2942 AESNKAFLAELEQNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEE 2988


>gi|33188445 microfilament and actin filament cross-linker protein
            isoform a [Homo sapiens]
          Length = 5430

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 44   AWSNFRFHRFLDVNSHKIEKTIEGIYEKFVIHSDLSKAASWKRLTEE 90
            A SN  F   L+ NS KI+K  E +    V + +  +A +WK++ EE
Sbjct: 2440 AESNKAFLAELEQNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEE 2486


>gi|39725952 angiogenic factor VG5Q [Homo sapiens]
          Length = 714

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 9/84 (10%)

Query: 121 PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE 180
           P++ + +E+P ++ +     F   K +  D E + G   D+       E    +  ++ E
Sbjct: 336 PTSGNTIESPLHENISNSTSFKDEKIMETDSEPEEGEITDSQTEDSYDEAITSEGNVTAE 395

Query: 181 DSGIQVDRTPLEEQDQNRKLDPCI 204
           DS         E++D+++   PCI
Sbjct: 396 DS---------EDEDEDKIWPPCI 410


>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           9 [Homo sapiens]
          Length = 771

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)

Query: 75  HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
           +SD  KA+ W R       E F L      +KE K +    +LS L  +SDS      + 
Sbjct: 211 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 269

Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
           SS  E+    E E+++         E+EE + G      + SEESEEE +++    E++G
Sbjct: 270 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 314


>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           8 [Homo sapiens]
          Length = 780

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)

Query: 75  HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
           +SD  KA+ W R       E F L      +KE K +    +LS L  +SDS      + 
Sbjct: 220 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 278

Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
           SS  E+    E E+++         E+EE + G      + SEESEEE +++    E++G
Sbjct: 279 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 323


>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           5 [Homo sapiens]
          Length = 748

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)

Query: 75  HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
           +SD  KA+ W R       E F L      +KE K +    +LS L  +SDS      + 
Sbjct: 188 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 246

Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
           SS  E+    E E+++         E+EE + G      + SEESEEE +++    E++G
Sbjct: 247 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 291


>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           4 [Homo sapiens]
          Length = 737

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)

Query: 75  HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
           +SD  KA+ W R       E F L      +KE K +    +LS L  +SDS      + 
Sbjct: 177 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 235

Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
           SS  E+    E E+++         E+EE + G      + SEESEEE +++    E++G
Sbjct: 236 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 280


>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           2 [Homo sapiens]
          Length = 782

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 27/120 (22%)

Query: 75  HSDLSKAASWKRLT-----EEF-LNAPLPSIKEIKTDAHYSILSLLLCLSDSP-----SN 123
           +SD  KA+ W R       E F L      +KE K +    +LS L  +SDS      + 
Sbjct: 222 YSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERKTSSAE 280

Query: 124 SSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSREDSG 183
           SS  E+    E E+++         E+EE + G      + SEESEEE +++    E++G
Sbjct: 281 SSSAESGSGSEEEEEE---------EEEEEEEG------STSEESEEEEEEEEEEEEETG 325


>gi|221219020 NYD-SP11 protein [Homo sapiens]
          Length = 2873

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 7/116 (6%)

Query: 99   IKEIKTDAHYS--ILSLLLCLSDSPSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIG 156
            + E++++ H+S  + SLL  L    S SS  E  R +E E++++      + E+EE    
Sbjct: 2217 VDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEE-----EVREEEEERKE 2271

Query: 157  PYMDTPNWSEESEEENDQQPLSREDSGIQVDRTPLEEQDQNRKLDPCISWKDEPDD 212
                     E+ EEE  ++   ++   +Q      EE+++    +   S  DE ++
Sbjct: 2272 EEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEE 2327


>gi|194097442 protein tyrosine phosphatase, receptor type, N
           polypeptide 2 isoform 3 precursor [Homo sapiens]
          Length = 986

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 492 FIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQGP 541
           F+ QR +NVP N R     TY    V  K EN    SD  +AS   D  P
Sbjct: 734 FVAQREENVPKN-RSLAVLTYDHSRVLLKAENSHSHSDYINASPIMDHDP 782


>gi|194097440 protein tyrosine phosphatase, receptor type, N
           polypeptide 2 isoform 1 precursor [Homo sapiens]
          Length = 1015

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 492 FIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQGP 541
           F+ QR +NVP N R     TY    V  K EN    SD  +AS   D  P
Sbjct: 763 FVAQREENVPKN-RSLAVLTYDHSRVLLKAENSHSHSDYINASPIMDHDP 811


>gi|194097438 protein tyrosine phosphatase, receptor type, N
           polypeptide 2 isoform 2 precursor [Homo sapiens]
          Length = 998

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 492 FIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQGP 541
           F+ QR +NVP N R     TY    V  K EN    SD  +AS   D  P
Sbjct: 746 FVAQREENVPKN-RSLAVLTYDHSRVLLKAENSHSHSDYINASPIMDHDP 794


>gi|153945755 zinc finger protein 608 [Homo sapiens]
          Length = 1512

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 20/80 (25%)

Query: 162  PNWSEESEEENDQQPLSREDSGIQVDRTPLEEQDQNRKL------------------DPC 203
            P+   ++EE    Q LS     +Q D    ++ + ++ +                  DP 
Sbjct: 1171 PSVPNKTEETGKSQLLSNHQQQLQADSFKAKQMENHQLIKEAVEMKSVMDSMKQTGVDPT 1230

Query: 204  ISWKDEPDDRSWLEHHVVHQ 223
              +K +PD R+W  HH V+Q
Sbjct: 1231 SRFKQDPDSRTW--HHYVYQ 1248


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,111,613
Number of Sequences: 37866
Number of extensions: 1675424
Number of successful extensions: 5199
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5096
Number of HSP's gapped (non-prelim): 90
length of query: 1024
length of database: 18,247,518
effective HSP length: 112
effective length of query: 912
effective length of database: 14,006,526
effective search space: 12773951712
effective search space used: 12773951712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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