Guide to the Human Genome
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Name: GRIA4 Sequence: fasta or formatted (902aa) NCBI GI: 164419734
Description:

glutamate receptor, ionotrophic, AMPA 4 isoform 1 precursor

Referenced in:

Glutamate

Other entries for this name:
alt prot [433aa] glutamate receptor, ionotrophic, AMPA 4 isoform 3 precursor
alt prot [884aa] glutamate receptor, ionotrophic, AMPA 4 isoform 2 precursor
alt prot [433aa] glutamate receptor, ionotrophic, AMPA 4 isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         62           2
 C cysteine            1.4         13           1
 D aspartate           4.8         43           1
 E glutamate           6.0         54           2
 F phenylalanine       5.3         48           2
 G glycine             8.0         72           2
 H histidine           1.6         14           1
 I isoleucine          6.8         61           3
 K lysine              6.1         55           2
 L leucine             8.6         78           2
 M methionine          2.7         24           1
 N asparagine          3.9         35           1
 P proline             4.1         37           2
 Q glutamine           3.0         27           2
 R arginine            5.1         46           2
 S serine              7.8         70           2
 T threonine           5.4         49           2
 V valine              7.2         65           3
 W tryptophan          1.7         15           2
 Y tyrosine            3.8         34           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamate receptor, ionotrophic, AMPA 4 isoform 1 p... 
GRIA4                 0.930   glutamate receptor, ionotrophic, AMPA 4 isoform 2 p...
GRIA3                 0.733   glutamate receptor, ionotrophic, AMPA 3 isoform 1 p...
GRIA3                 0.723   glutamate receptor, ionotrophic, AMPA 3 isoform 2 p...
GRIA2                 0.717   glutamate receptor, ionotropic, AMPA 2 isoform 1 pre...
GRIA2                 0.708   glutamate receptor, ionotropic, AMPA 2 isoform 2 pr...
GRIA2                 0.696   glutamate receptor, ionotropic, AMPA 2 isoform 3 [H...
GRIA1                 0.676   glutamate receptor, ionotropic, AMPA 1 isoform 2 [H...
GRIA1                 0.671   glutamate receptor, ionotropic, AMPA 1 isoform 1 [H...
GRIA4                 0.465   glutamate receptor, ionotrophic, AMPA 4 isoform 3 p...
GRIA4                 0.465   glutamate receptor, ionotrophic, AMPA 4 isoform 3 p...
GRIK2                 0.317   glutamate receptor, ionotropic, kainate 2 isoform 1 ...
GRIK3                 0.316   glutamate receptor, ionotropic, kainate 3 precursor ...
GRIK1                 0.315   glutamate receptor, ionotropic, kainate 1 isoform 2 ...
GRIK2                 0.314   glutamate receptor, ionotropic, kainate 2 isoform 2 ...
GRIK1                 0.310   glutamate receptor, ionotropic, kainate 1 isoform 1 p...
GRIK5                 0.266   glutamate receptor KA2 precursor 
GRIK4                 0.262   glutamate receptor KA1 precursor 
GRID2                 0.172   glutamate receptor, ionotropic, delta 2 
GRID1                 0.172   glutamate receptor, ionotropic, delta 1 precursor [H...
GRIN1                 0.109   NMDA receptor 1 isoform NR1-2 precursor 
GRIN1                 0.108   NMDA receptor 1 isoform NR1-3 precursor 
GRIN1                 0.108   NMDA receptor 1 isoform NR1-1 precursor 
GRIN2C                0.094   N-methyl-D-aspartate receptor subunit 2C precursor [...
GRIN2B                0.093   N-methyl-D-aspartate receptor subunit 2B precursor ...
GRIN2D                0.083   N-methyl-D-aspartate receptor subunit 2D precursor ...
GRIN2A                0.082   N-methyl-D-aspartate receptor subunit 2A isoform 2 ...
GRIN2A                0.082   N-methyl-D-aspartate receptor subunit 2A isoform 1 ...
GRIN2A                0.082   N-methyl-D-aspartate receptor subunit 2A isoform 1 pr...
GRIN3B                0.073   glutamate receptor, ionotropic, N-methyl-D-aspartate...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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