Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 156523235
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156523235 phosphatidic acid phosphatase type 2 domain
containing 1B isoform 2 [Homo sapiens]
(216 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156523235 phosphatidic acid phosphatase type 2 domain contain... 446 e-126
gi|156523237 phosphatidic acid phosphatase type 2 domain contain... 433 e-122
gi|156523239 phosphatidic acid phosphatase type 2 domain contain... 311 4e-85
gi|73611920 phosphatidic acid phosphatase type 2 domain containi... 289 1e-78
gi|4505977 phosphatidic acid phosphatase type 2C isoform 1 [Homo... 64 1e-10
gi|29171745 phosphatidic acid phosphatase type 2C isoform 2 [Hom... 64 1e-10
gi|29171747 phosphatidic acid phosphatase type 2C isoform 3 [Hom... 64 1e-10
gi|29171740 phosphatidic acid phosphatase type 2B [Homo sapiens] 61 6e-10
gi|29171742 phosphatidic acid phosphatase type 2B [Homo sapiens] 61 6e-10
gi|29171738 phosphatidic acid phosphatase type 2A isoform 2 [Hom... 59 2e-09
gi|29171736 phosphatidic acid phosphatase type 2A isoform 1 [Hom... 59 2e-09
gi|46877066 plasticity related gene 3 [Homo sapiens] 50 2e-06
gi|46877064 plasticity related gene 3 [Homo sapiens] 50 2e-06
gi|82659094 phosphatidic acid phosphatase type 2d isoform 1 [Hom... 44 1e-04
gi|61102719 phosphatidic acid phosphatase type 2d isoform 2 [Hom... 44 1e-04
gi|33636722 plasticity related gene 1 [Homo sapiens] 41 9e-04
gi|12232395 lipid phosphate phosphatase-related protein type 2 [... 35 0.049
gi|157266326 oculocutaneous albinism II [Homo sapiens] 29 2.7
gi|239755901 PREDICTED: chromosome 12 open reading frame 64 [Hom... 29 3.5
gi|239750386 PREDICTED: chromosome 12 open reading frame 64 [Hom... 29 3.5
gi|239744688 PREDICTED: hypothetical protein LOC283310 [Homo sap... 29 3.5
gi|157502169 astacin-like metalloendopeptidase [Homo sapiens] 28 4.5
>gi|156523235 phosphatidic acid phosphatase type 2 domain containing
1B isoform 2 [Homo sapiens]
Length = 216
Score = 446 bits (1148), Expect = e-126
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MGKAAAAVAFGAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPM 60
MGKAAAAVAFGAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPM
Sbjct: 1 MGKAAAAVAFGAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPM 60
Query: 61 FVIAFLSPLSLIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFY 120
FVIAFLSPLSLIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFY
Sbjct: 61 FVIAFLSPLSLIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFY 120
Query: 121 RCFPDGLAHSDLMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRG 180
RCFPDGLAHSDLMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRG
Sbjct: 121 RCFPDGLAHSDLMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRG 180
Query: 181 KSWRFCAFLSPLLFAAVIALSRTCDYKHHWQGPFKW 216
KSWRFCAFLSPLLFAAVIALSRTCDYKHHWQGPFKW
Sbjct: 181 KSWRFCAFLSPLLFAAVIALSRTCDYKHHWQGPFKW 216
>gi|156523237 phosphatidic acid phosphatase type 2 domain containing
1B isoform 1 [Homo sapiens]
Length = 264
Score = 433 bits (1113), Expect = e-122
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MGKAAAAVAFGAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPM 60
MGKAAAAVAFGAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPM
Sbjct: 1 MGKAAAAVAFGAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPM 60
Query: 61 FVIAFLSPLSLIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFY 120
FVIAFLSPLSLIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFY
Sbjct: 61 FVIAFLSPLSLIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFY 120
Query: 121 RCFPDGLAHSDLMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRG 180
RCFPDGLAHSDLMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRG
Sbjct: 121 RCFPDGLAHSDLMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRG 180
Query: 181 KSWRFCAFLSPLLFAAVIALSRTCDYKHHWQ 211
KSWRFCAFLSPLLFAAVIALSRTCDYKHHWQ
Sbjct: 181 KSWRFCAFLSPLLFAAVIALSRTCDYKHHWQ 211
>gi|156523239 phosphatidic acid phosphatase type 2 domain containing
1B isoform 3 [Homo sapiens]
Length = 176
Score = 311 bits (796), Expect = 4e-85
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MGKAAAAVAFGAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPM 60
MGKAAAAVAFGAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPM
Sbjct: 1 MGKAAAAVAFGAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPM 60
Query: 61 FVIAFLSPLSLIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFY 120
FVIAFLSPLSLIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFY
Sbjct: 61 FVIAFLSPLSLIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFY 120
Query: 121 RCFPDGLAHSDLMCTGDKDVVNEGRKSFPSGHSS 154
RCFPDGLAHSDLMCTGDKDVVNEGRKSFPSGHSS
Sbjct: 121 RCFPDGLAHSDLMCTGDKDVVNEGRKSFPSGHSS 154
>gi|73611920 phosphatidic acid phosphatase type 2 domain containing
1A [Homo sapiens]
Length = 271
Score = 289 bits (739), Expect = 1e-78
Identities = 133/202 (65%), Positives = 163/202 (80%)
Query: 13 EVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPMFVIAFLSPLSLI 72
E+GVR LF F+ TE L PFQR+IQPEE+WLY+NP V+++ PT+ MF I+FL+PL++I
Sbjct: 7 EIGVRALLFGVFVFTEFLDPFQRVIQPEEIWLYKNPLVQSDNIPTRLMFAISFLTPLAVI 66
Query: 73 FLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHSDL 132
+ K +++ D + ++A LA SLALALNGV TNTIKLIVGRPRPDFFYRCFPDG+ +S++
Sbjct: 67 CVVKIIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGVMNSEM 126
Query: 133 MCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPL 192
CTGD D+V+EGRKSFPS HSSFAF+GL F +FYLAGKLHCFT GRGKSWR CA + PL
Sbjct: 127 HCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILPL 186
Query: 193 LFAAVIALSRTCDYKHHWQGPF 214
A +IALSR CDYKHHWQ F
Sbjct: 187 YCAMMIALSRMCDYKHHWQDSF 208
>gi|4505977 phosphatidic acid phosphatase type 2C isoform 1 [Homo
sapiens]
Length = 288
Score = 63.5 bits (153), Expect = 1e-10
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 98 ALNGVFTNTIKLIVGRPRPDFFYRCFPDG-------LAHSDLMCTGDKDVVNEGRKSFPS 150
A++ T+ K ++GR RP+F C PD + +C G+ V E R SF S
Sbjct: 107 AVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYS 166
Query: 151 GHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSP------LLFAAVIALSRTC 204
GHSSF + F + Y+ +L W++ L P + FA + +R
Sbjct: 167 GHSSFGMYCMVFLALYVQARL----------CWKWARLLRPTVQFFLVAFALYVGYTRVS 216
Query: 205 DYKHHW 210
DYKHHW
Sbjct: 217 DYKHHW 222
>gi|29171745 phosphatidic acid phosphatase type 2C isoform 2 [Homo
sapiens]
Length = 232
Score = 63.5 bits (153), Expect = 1e-10
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 98 ALNGVFTNTIKLIVGRPRPDFFYRCFPDG-------LAHSDLMCTGDKDVVNEGRKSFPS 150
A++ T+ K ++GR RP+F C PD + +C G+ V E R SF S
Sbjct: 51 AVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYS 110
Query: 151 GHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSP------LLFAAVIALSRTC 204
GHSSF + F + Y+ +L W++ L P + FA + +R
Sbjct: 111 GHSSFGMYCMVFLALYVQARL----------CWKWARLLRPTVQFFLVAFALYVGYTRVS 160
Query: 205 DYKHHW 210
DYKHHW
Sbjct: 161 DYKHHW 166
>gi|29171747 phosphatidic acid phosphatase type 2C isoform 3 [Homo
sapiens]
Length = 309
Score = 63.5 bits (153), Expect = 1e-10
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 98 ALNGVFTNTIKLIVGRPRPDFFYRCFPDG-------LAHSDLMCTGDKDVVNEGRKSFPS 150
A++ T+ K ++GR RP+F C PD + +C G+ V E R SF S
Sbjct: 128 AVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYS 187
Query: 151 GHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSP------LLFAAVIALSRTC 204
GHSSF + F + Y+ +L W++ L P + FA + +R
Sbjct: 188 GHSSFGMYCMVFLALYVQARL----------CWKWARLLRPTVQFFLVAFALYVGYTRVS 237
Query: 205 DYKHHW 210
DYKHHW
Sbjct: 238 DYKHHW 243
>gi|29171740 phosphatidic acid phosphatase type 2B [Homo sapiens]
Length = 311
Score = 61.2 bits (147), Expect = 6e-10
Identities = 42/125 (33%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 98 ALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHS-------DLMCTGDKDVVNEGRKSFPS 150
A++ FT+ K+ +GR RP F C PD + + C GD V E RKSF S
Sbjct: 138 AISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNYRCRGDDSKVQEARKSFFS 197
Query: 151 GHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLL------FAAVIALSRTC 204
GH+SF+ + + YL + +WR L PLL A LSR
Sbjct: 198 GHASFSMYTMLYLVLYLQARF----------TWRGARLLRPLLQFTLIMMAFYTGLSRVS 247
Query: 205 DYKHH 209
D+KHH
Sbjct: 248 DHKHH 252
>gi|29171742 phosphatidic acid phosphatase type 2B [Homo sapiens]
Length = 311
Score = 61.2 bits (147), Expect = 6e-10
Identities = 42/125 (33%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 98 ALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHS-------DLMCTGDKDVVNEGRKSFPS 150
A++ FT+ K+ +GR RP F C PD + + C GD V E RKSF S
Sbjct: 138 AISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNYRCRGDDSKVQEARKSFFS 197
Query: 151 GHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLL------FAAVIALSRTC 204
GH+SF+ + + YL + +WR L PLL A LSR
Sbjct: 198 GHASFSMYTMLYLVLYLQARF----------TWRGARLLRPLLQFTLIMMAFYTGLSRVS 247
Query: 205 DYKHH 209
D+KHH
Sbjct: 248 DHKHH 252
>gi|29171738 phosphatidic acid phosphatase type 2A isoform 2 [Homo
sapiens]
Length = 285
Score = 59.3 bits (142), Expect = 2e-09
Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 104 TNTIKLIVGRPRPDFFYRCFPDG--LAHSD-----LMCTGDKDVVNEGRKSFPSGHSSFA 156
T+ K +GR RP F C PD + SD +C G+ + V EGR SF SGHSSF+
Sbjct: 117 TDIAKYSIGRLRPHFLDVCDPDWSKINCSDGYIEYYICRGNAERVKEGRLSFYSGHSSFS 176
Query: 157 FAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLLFAAVIA------LSRTCDYKHHW 210
+ F + YL ++ + L P L ++A LSR DYKHHW
Sbjct: 177 MYCMLFVALYLQARM----------KGDWARLLRPTLQFGLVAVSIYVGLSRVSDYKHHW 226
>gi|29171736 phosphatidic acid phosphatase type 2A isoform 1 [Homo
sapiens]
Length = 284
Score = 59.3 bits (142), Expect = 2e-09
Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 104 TNTIKLIVGRPRPDFFYRCFPDG--LAHSD-----LMCTGDKDVVNEGRKSFPSGHSSFA 156
T+ K +GR RP F C PD + SD +C G+ + V EGR SF SGHSSF+
Sbjct: 116 TDIAKYSIGRLRPHFLDVCDPDWSKINCSDGYIEYYICRGNAERVKEGRLSFYSGHSSFS 175
Query: 157 FAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLLFAAVIA------LSRTCDYKHHW 210
+ F + YL ++ + L P L ++A LSR DYKHHW
Sbjct: 176 MYCMLFVALYLQARM----------KGDWARLLRPTLQFGLVAVSIYVGLSRVSDYKHHW 225
>gi|46877066 plasticity related gene 3 [Homo sapiens]
Length = 325
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 94 SLALALNGVFTNTIKLIVGRPRPDFFYRCFP-----DGLAHSDLM-----CTGDKDVVNE 143
+ L +F N +++ G P F C P D AH + CTGD +V+ +
Sbjct: 132 AFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEK 191
Query: 144 GRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLLFAAVIALSRT 203
R+SFPS H++ + +A+ Y+ + T R C L L A + L+R
Sbjct: 192 ARRSFPSKHAALSIYSALYATMYITSTIK--TKSSRLAKPVLC--LGTLCTAFLTGLNRV 247
Query: 204 CDYKHH 209
+Y++H
Sbjct: 248 SEYRNH 253
>gi|46877064 plasticity related gene 3 [Homo sapiens]
Length = 325
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 94 SLALALNGVFTNTIKLIVGRPRPDFFYRCFP-----DGLAHSDLM-----CTGDKDVVNE 143
+ L +F N +++ G P F C P D AH + CTGD +V+ +
Sbjct: 132 AFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEK 191
Query: 144 GRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLLFAAVIALSRT 203
R+SFPS H++ + +A+ Y+ + T R C L L A + L+R
Sbjct: 192 ARRSFPSKHAALSIYSALYATMYITSTIK--TKSSRLAKPVLC--LGTLCTAFLTGLNRV 247
Query: 204 CDYKHH 209
+Y++H
Sbjct: 248 SEYRNH 253
>gi|82659094 phosphatidic acid phosphatase type 2d isoform 1 [Homo
sapiens]
Length = 321
Score = 43.9 bits (102), Expect = 1e-04
Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 20/130 (15%)
Query: 94 SLALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLA----------HSDLMCTGDKDVVNE 143
+ L +F N +++ G P F C P+ A + CTG+ D++
Sbjct: 127 TFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQYTQFISGEEACTGNPDLIMR 186
Query: 144 GRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFC---AFLSPLLFAAVIAL 200
RK+FPS ++ + + + Y+ + + K R L + A + L
Sbjct: 187 ARKTFPSKEAALSVYAAMYLTMYITNTI-------KAKGTRLAKPVLCLGLMCLAFLTGL 239
Query: 201 SRTCDYKHHW 210
+R +Y++HW
Sbjct: 240 NRVAEYRNHW 249
>gi|61102719 phosphatidic acid phosphatase type 2d isoform 2 [Homo
sapiens]
Length = 316
Score = 43.9 bits (102), Expect = 1e-04
Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 20/130 (15%)
Query: 94 SLALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLA----------HSDLMCTGDKDVVNE 143
+ L +F N +++ G P F C P+ A + CTG+ D++
Sbjct: 127 TFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQYTQFISGEEACTGNPDLIMR 186
Query: 144 GRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFC---AFLSPLLFAAVIAL 200
RK+FPS ++ + + + Y+ + + K R L + A + L
Sbjct: 187 ARKTFPSKEAALSVYAAMYLTMYITNTI-------KAKGTRLAKPVLCLGLMCLAFLTGL 239
Query: 201 SRTCDYKHHW 210
+R +Y++HW
Sbjct: 240 NRVAEYRNHW 249
>gi|33636722 plasticity related gene 1 [Homo sapiens]
Length = 763
Score = 40.8 bits (94), Expect = 9e-04
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 16/124 (12%)
Query: 97 LALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHS-----------DLMCTGDKDVVNEGR 145
L + T+ I+L G P F C P+ + + D+ D V+N GR
Sbjct: 186 LCSTALITDIIQLSTGYQAPYFLTVCKPNYTSLNVSCKENSYIVEDICSGSDLTVINSGR 245
Query: 146 KSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLLFAAVIALSRTCD 205
KSFPS H++ A + S Y L K + + ++ + L+R
Sbjct: 246 KSFPSQHATLAAFAAVYVSMYFNSTL-----TDSSKLLKPLLVFTFIICGIICGLTRITQ 300
Query: 206 YKHH 209
YK+H
Sbjct: 301 YKNH 304
>gi|12232395 lipid phosphate phosphatase-related protein type 2
[Homo sapiens]
Length = 343
Score = 35.0 bits (79), Expect = 0.049
Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 25/136 (18%)
Query: 94 SLALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHSDL-----------------MCTG 136
S L +F N +++ G P P F C P+ A L C G
Sbjct: 134 SFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPPSPDRPGPDRFVTDQGACAG 193
Query: 137 DKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRG--KSWRFCAFLSPLLF 194
+V R++FP ++ + + + Y+ F +G K A L P
Sbjct: 194 SPSLVAAARRAFPCKDAALCAYAVTYTAMYVT---LVFRVKGSRLVKPSLCLALLCPAFL 250
Query: 195 AAVIALSRTCDYKHHW 210
V+ R +Y++HW
Sbjct: 251 VGVV---RVAEYRNHW 263
>gi|157266326 oculocutaneous albinism II [Homo sapiens]
Length = 838
Score = 29.3 bits (64), Expect = 2.7
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 112 GRPRPDFFYRCFPDGLAHSDLMCTGDKDVVNEGRKSFPS--------GHSSFAFAGLAFA 163
G P + P GLA + G + + + PS G SS+A AG FA
Sbjct: 13 GAPAVELLQTSVPSGLAE---LVAGKRRLPRGAGGADPSHSCPRGAAGQSSWAPAGQEFA 69
Query: 164 SFYLAGKLHCFTPQ 177
SF G+ H PQ
Sbjct: 70 SFLTKGRSHSSLPQ 83
>gi|239755901 PREDICTED: chromosome 12 open reading frame 64 [Homo
sapiens]
Length = 2250
Score = 28.9 bits (63), Expect = 3.5
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 118 FFYRCFPDGLA---HSDLMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCF 174
+ Y+C +G++ S +C+ D + NEG P +S+ +GL + + + C
Sbjct: 1088 YAYKCCQEGISIHWRSSTVCSLDCEYYNEGLGEGPYMLASYGQSGLVLGANMTSRSVFCL 1147
Query: 175 TPQGRGKSWRFCAFLSPLLF 194
S F ++P LF
Sbjct: 1148 PRSSVHTSLFFYFMITPGLF 1167
>gi|239750386 PREDICTED: chromosome 12 open reading frame 64 [Homo
sapiens]
Length = 2250
Score = 28.9 bits (63), Expect = 3.5
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 118 FFYRCFPDGLA---HSDLMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCF 174
+ Y+C +G++ S +C+ D + NEG P +S+ +GL + + + C
Sbjct: 1088 YAYKCCQEGISIHWRSSTVCSLDCEYYNEGLGEGPYMLASYGQSGLVLGANMTSRSVFCL 1147
Query: 175 TPQGRGKSWRFCAFLSPLLF 194
S F ++P LF
Sbjct: 1148 PRSSVHTSLFFYFMITPGLF 1167
>gi|239744688 PREDICTED: hypothetical protein LOC283310 [Homo sapiens]
Length = 2250
Score = 28.9 bits (63), Expect = 3.5
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 118 FFYRCFPDGLA---HSDLMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCF 174
+ Y+C +G++ S +C+ D + NEG P +S+ +GL + + + C
Sbjct: 1088 YAYKCCQEGISIHWRSSTVCSLDCEYYNEGLGEGPYMLASYGQSGLVLGANMTSRSVFCL 1147
Query: 175 TPQGRGKSWRFCAFLSPLLF 194
S F ++P LF
Sbjct: 1148 PRSSVHTSLFFYFMITPGLF 1167
>gi|157502169 astacin-like metalloendopeptidase [Homo sapiens]
Length = 431
Score = 28.5 bits (62), Expect = 4.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 123 FPDGLAHSDLMCTGDKDV--VNEGRKSFPSGHSSFAFAG 159
FPDGL +GDKD+ +N+G + SSF G
Sbjct: 38 FPDGLTPEGTQASGDKDIPAINQGLILEETPESSFLIEG 76
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.141 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,617,131
Number of Sequences: 37866
Number of extensions: 390555
Number of successful extensions: 784
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 740
Number of HSP's gapped (non-prelim): 29
length of query: 216
length of database: 18,247,518
effective HSP length: 98
effective length of query: 118
effective length of database: 14,536,650
effective search space: 1715324700
effective search space used: 1715324700
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.