Guide to the Human Genome
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Name: NRBF2 Sequence: fasta or formatted (287aa) NCBI GI: 156231355
Description:

nuclear receptor binding factor 2

Referenced in:

Nuclear Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         31           3
 C cysteine            1.0          3           1
 D aspartate           5.9         17           2
 E glutamate          10.8         31           2
 F phenylalanine       2.1          6           1
 G glycine             2.8          8           1
 H histidine           2.8          8           1
 I isoleucine          4.2         12           2
 K lysine              9.4         27           2
 L leucine            12.2         35           3
 M methionine          2.1          6           1
 N asparagine          2.8          8           2
 P proline             6.6         19           2
 Q glutamine           6.6         19           2
 R arginine            4.5         13           2
 S serine              7.0         20           2
 T threonine           4.2         12           1
 V valine              1.7          5           1
 W tryptophan          1.0          3           1
 Y tyrosine            1.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear receptor binding factor 2 
CROCC                 0.029   ciliary rootlet coiled-coil 
KIF4A                 0.027   kinesin family member 4 
CEP250                0.027   centrosomal protein 2 
MYH13                 0.026   myosin, heavy polypeptide 13, skeletal muscle [Homo...
CENPE                 0.026   centromere protein E 
CCDC64B               0.024   coiled-coil domain containing 64B 
CCDC114               0.022   coiled-coil domain containing 114 isoform 2 
SYCP1                 0.022   synaptonemal complex protein 1 
NUMA1                 0.022   nuclear mitotic apparatus protein 1 
MYO18A                0.022   myosin 18A isoform b 
MYO18A                0.022   myosin 18A isoform a 
GOLGA6C               0.020   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
GOLGA6B               0.020   golgi autoantigen, golgin subfamily a, 6B 
GOLGA6D               0.020   golgi autoantigen, golgin subfamily a, 6D 
CCDC88C               0.020   DVL-binding protein DAPLE 
GOLGA6                0.020   golgi autoantigen, golgin subfamily a, 6 
NEFH                  0.018   neurofilament, heavy polypeptide 200kDa 
GOLGA4                0.018   golgi autoantigen, golgin subfamily a, 4 
PMFBP1                0.018   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.018   polyamine modulated factor 1 binding protein 1 isof...
ACIN1                 0.018   apoptotic chromatin condensation inducer 1 
ERC2                  0.018   cytomatrix protein p110 
LOC727832             0.016   golgi autoantigen, golgin subfamily a-like 
LOC645202             0.016   PREDICTED: hypothetical protein LOC645202 
TCHH                  0.016   trichohyalin 
CCDC147               0.016   coiled-coil domain containing 147 
LOC647042             0.016   PREDICTED: hypothetical protein isoform 1 
HAP1                  0.016   huntingtin-associated protein 1 isoform 4 
HAP1                  0.016   huntingtin-associated protein 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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