LOC652798 9264

Name: LOC652798	Sequence: fasta or formatted (625aa)		NCBI GI: 169218113
Description: PREDICTED: similar to plakophilin 1, partial		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 45 3 C cysteine 3.5 22 1 D aspartate 4.5 28 2 E glutamate 4.5 28 3 F phenylalanine 2.4 15 2 G glycine 6.4 40 2 H histidine 1.3 8 1 I isoleucine 3.8 24 2 K lysine 5.3 33 2 L leucine 10.2 64 3 M methionine 2.7 17 2 N asparagine 6.7 42 3 P proline 4.0 25 2 Q glutamine 5.4 34 2 R arginine 6.7 42 2 S serine 11.7 73 3 T threonine 5.1 32 2 V valine 4.0 25 2 W tryptophan 0.8 5 1 Y tyrosine 3.7 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to plakophilin 1, partial PKP1 1.000 plakophilin 1 isoform 1a PKP1 0.989 plakophilin 1 isoform 1b PKP2 0.273 plakophilin 2 isoform 2a PKP2 0.256 plakophilin 2 isoform 2b PKP4 0.201 plakophilin 4 isoform b PKP4 0.201 plakophilin 4 isoform a CTNND2 0.193 catenin (cadherin-associated protein), delta 2 (neur... PKP3 0.190 plakophilin 3 ARVCF 0.180 armadillo repeat protein CTNND1 0.166 catenin, delta 1 isoform 3A CTNND1 0.166 catenin, delta 1 isoform 3A CTNND1 0.166 catenin, delta 1 isoform 3A CTNND1 0.166 catenin, delta 1 isoform 3B CTNND1 0.166 catenin, delta 1 isoform 3AB CTNND1 0.166 catenin, delta 1 isoform 1A CTNND1 0.166 catenin, delta 1 isoform 1A CTNND1 0.166 catenin, delta 1 isoform 1A CTNND1 0.166 catenin, delta 1 isoform 1B CTNND1 0.166 catenin, delta 1 isoform 1AB CTNND1 0.165 catenin, delta 1 isoform 3AC CTNND1 0.165 catenin, delta 1 isoform 3ABC CTNND1 0.165 catenin, delta 1 isoform 1ABC JUP 0.017 junction plakoglobin JUP 0.017 junction plakoglobin APC 0.014 adenomatous polyposis coli APC 0.014 adenomatous polyposis coli APC 0.014 adenomatous polyposis coli ARMC3 0.014 armadillo repeat containing 3 CTNNB1 0.013 catenin (cadherin-associated protein), beta 1, 88kD... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.