Guide to the Human Genome
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Name: HKDC1 Sequence: fasta or formatted (917aa) NCBI GI: 156151420
Description:

hexokinase domain containing 1

Referenced in:

Hexokinases and Initial Sugar Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         61           3
 C cysteine            2.5         23           1
 D aspartate           6.5         60           2
 E glutamate           7.3         67           2
 F phenylalanine       4.0         37           1
 G glycine             8.7         80           2
 H histidine           1.6         15           1
 I isoleucine          5.2         48           2
 K lysine              6.9         63           3
 L leucine            11.1        102           2
 M methionine          4.0         37           2
 N asparagine          2.5         23           1
 P proline             2.4         22           1
 Q glutamine           3.5         32           2
 R arginine            6.9         63           2
 S serine              4.4         40           2
 T threonine           6.1         56           2
 V valine              6.9         63           2
 W tryptophan          0.4          4           1
 Y tyrosine            2.3         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hexokinase domain containing 1 
HK1                   0.738   hexokinase 1 isoform HKI 
HK1                   0.723   hexokinase 1 isoform HKI-ta/tb 
HK1                   0.723   hexokinase 1 isoform HKI-ta/tb 
HK1                   0.723   hexokinase 1 isoform HKI-td 
HK1                   0.723   hexokinase 1 isoform HKI-R 
HK2                   0.714   hexokinase 2 
HK3                   0.515   hexokinase 3 
GCK                   0.262   glucokinase isoform 1 
GCK                   0.261   glucokinase isoform 3 
GCK                   0.261   glucokinase isoform 2 
RIMKLA                0.004   ribosomal modification protein rimK-like family mem...
VLDLR                 0.004   very low density lipoprotein receptor isoform b [Hom...
VLDLR                 0.004   very low density lipoprotein receptor isoform a [Hom...
OAF                   0.004   OAF homolog 
PABPC1                0.003   poly(A) binding protein, cytoplasmic 1 
PABPC3                0.003   poly(A) binding protein, cytoplasmic 3 
UPF2                  0.003   UPF2 regulator of nonsense transcripts homolog [Homo...
UPF2                  0.003   UPF2 regulator of nonsense transcripts homolog [Homo...
EIF4G1                0.003   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.003   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.003   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.003   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.003   eukaryotic translation initiation factor 4 gamma, 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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