Guide to the Human Genome
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Name: GCK Sequence: fasta or formatted (464aa) NCBI GI: 15967161
Description:

glucokinase isoform 3

Referenced in:

Hexokinases and Initial Sugar Metabolism

Other entries for this name:
alt prot [466aa] glucokinase isoform 2
alt prot [465aa] glucokinase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         25           2
 C cysteine            2.6         12           1
 D aspartate           5.8         27           1
 E glutamate           9.9         46           2
 F phenylalanine       3.9         18           1
 G glycine             8.6         40           2
 H histidine           2.2         10           1
 I isoleucine          3.7         17           1
 K lysine              4.7         22           2
 L leucine             9.1         42           2
 M methionine          4.7         22           1
 N asparagine          2.8         13           2
 P proline             2.8         13           1
 Q glutamine           3.9         18           2
 R arginine            6.9         32           2
 S serine              7.1         33           2
 T threonine           5.0         23           2
 V valine              8.0         37           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.4         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glucokinase isoform 3 
GCK                   0.970   glucokinase isoform 2 
GCK                   0.968   glucokinase isoform 1 
HK2                   0.544   hexokinase 2 
HK1                   0.530   hexokinase 1 isoform HKI-td 
HK1                   0.530   hexokinase 1 isoform HKI 
HK1                   0.530   hexokinase 1 isoform HKI-ta/tb 
HK1                   0.530   hexokinase 1 isoform HKI-ta/tb 
HK1                   0.530   hexokinase 1 isoform HKI-R 
HKDC1                 0.517   hexokinase domain containing 1 
HK3                   0.494   hexokinase 3 
ARHGEF6               0.010   Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo...
PDCD6IP               0.006   programmed cell death 6 interacting protein isoform...
PDCD6IP               0.006   programmed cell death 6 interacting protein isoform ...
CROCC                 0.006   ciliary rootlet coiled-coil 
CCDC19                0.006   nasopharyngeal epithelium specific protein 1 
CACNA1H               0.006   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.006   calcium channel, voltage-dependent, T type, alpha 1H...
DST                   0.006   dystonin isoform 1e precursor 
UBR3                  0.006   E3 ubiquitin-protein ligase UBR3 
SH3PXD2B              0.004   SH3 and PX domains 2B 
FAM46A                0.004   hypothetical protein LOC55603 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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