Guide to the Human Genome
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Name: OAF Sequence: fasta or formatted (273aa) NCBI GI: 30425438
Description:

OAF homolog

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         23           1
 C cysteine            3.7         10           1
 D aspartate           5.9         16           1
 E glutamate           6.6         18           2
 F phenylalanine       3.7         10           1
 G glycine             5.5         15           1
 H histidine           2.6          7           1
 I isoleucine          2.2          6           2
 K lysine              4.4         12           2
 L leucine            13.2         36           5
 M methionine          1.5          4           1
 N asparagine          1.5          4           1
 P proline             7.3         20           1
 Q glutamine           6.2         17           1
 R arginine            7.3         20           1
 S serine              6.2         17           2
 T threonine           2.6          7           1
 V valine              7.3         20           1
 W tryptophan          1.1          3           1
 Y tyrosine            2.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   OAF homolog 
ZNF695                0.013   zinc finger protein SBZF3 
PTPN18                0.013   protein tyrosine phosphatase, non-receptor type 18 ...
PTPN18                0.013   protein tyrosine phosphatase, non-receptor type 18 i...
HKDC1                 0.013   hexokinase domain containing 1 
ZNF799                0.013   zinc finger protein 799 
ZNF224                0.011   zinc finger protein 224 
ZNF551                0.011   zinc finger protein 551 
CBX2                  0.009   chromobox homolog 2 isoform 1 
ZNF765                0.009   zinc finger protein 765 
DNAH11                0.009   dynein, axonemal, heavy chain 11 
ZNF705D               0.009   zinc finger protein 705D 
IGFBP2                0.009   insulin-like growth factor binding protein 2, 36kDa ...
LOC100132396          0.009   PREDICTED: hypothetical protein LOC100132396 
ZNF578                0.009   zinc finger protein 578 
ZNF354C               0.009   zinc finger protein 354C 
ZNF594                0.007   zinc finger protein 594 
ZNF221                0.007   zinc finger protein 221 
TEX14                 0.007   testis expressed sequence 14 isoform a 
ZNF232                0.007   zinc finger protein 232 
TEX14                 0.007   testis expressed sequence 14 isoform b 
LOC388559             0.007   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.007   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.007   PREDICTED: hypothetical protein LOC388559 
ZNF785                0.007   zinc finger protein 785 
ZNF605                0.007   zinc finger protein 605 
ZIC5                  0.006   zinc finger protein of the cerebellum 5 
ZNF76                 0.006   zinc finger protein 76 (expressed in testis) 
ZNF540                0.006   zinc finger protein 540 
ZNF48                 0.006   zinc finger protein 48 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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