Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GCK Sequence: fasta or formatted (465aa) NCBI GI: 4503951
Description:

glucokinase isoform 1

Referenced in:

Hexokinases and Initial Sugar Metabolism

Other entries for this name:
alt prot [466aa] glucokinase isoform 2
alt prot [464aa] glucokinase isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         28           2
 C cysteine            2.6         12           1
 D aspartate           6.2         29           2
 E glutamate          10.3         48           2
 F phenylalanine       3.9         18           1
 G glycine             8.6         40           2
 H histidine           2.2         10           1
 I isoleucine          3.7         17           1
 K lysine              5.4         25           2
 L leucine             9.0         42           2
 M methionine          4.9         23           1
 N asparagine          2.6         12           2
 P proline             1.9          9           1
 Q glutamine           3.2         15           2
 R arginine            6.9         32           2
 S serine              6.7         31           2
 T threonine           4.9         23           2
 V valine              8.0         37           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.4         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glucokinase isoform 1 
GCK                   0.969   glucokinase isoform 3 
GCK                   0.968   glucokinase isoform 2 
HK2                   0.546   hexokinase 2 
HK1                   0.529   hexokinase 1 isoform HKI-td 
HK1                   0.529   hexokinase 1 isoform HKI 
HK1                   0.529   hexokinase 1 isoform HKI-ta/tb 
HK1                   0.529   hexokinase 1 isoform HKI-ta/tb 
HK1                   0.529   hexokinase 1 isoform HKI-R 
HKDC1                 0.519   hexokinase domain containing 1 
HK3                   0.497   hexokinase 3 
CROCC                 0.010   ciliary rootlet coiled-coil 
FAM76A                0.008   hypothetical protein LOC199870 isoform 4 
FAM76A                0.008   hypothetical protein LOC199870 isoform 2 
FAM76A                0.008   hypothetical protein LOC199870 isoform 1 
FAM76A                0.008   hypothetical protein LOC199870 isoform 5 
FAM76A                0.008   hypothetical protein LOC199870 isoform 3 
ARHGEF6               0.008   Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo...
CCDC73                0.008   sarcoma antigen NY-SAR-79 
NOP58                 0.007   NOP58 ribonucleoprotein homolog 
ANKHD1                0.006   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.006   ANKHD1-EIF4EBP3 protein 
LOC100130958          0.006   hypothetical protein LOC100130958 
CCDC19                0.006   nasopharyngeal epithelium specific protein 1 
SPAG5                 0.006   sperm associated antigen 5 
UACA                  0.006   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.006   uveal autoantigen with coiled-coil domains and ankyr...
EIF2AK4               0.006   eukaryotic translation initiation factor 2 alpha kin...
CACNA1H               0.006   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.006   calcium channel, voltage-dependent, T type, alpha 1H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press