BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|156119599 transmembrane protein 215 [Homo sapiens] (235 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|156119599 transmembrane protein 215 [Homo sapiens] 486 e-138 gi|126012562 low density lipoprotein-related protein 1 [Homo sap... 39 0.005 gi|239746026 PREDICTED: hypothetical protein XP_002344173 [Homo ... 36 0.025 gi|239757005 PREDICTED: hypothetical protein [Homo sapiens] 35 0.073 gi|239751519 PREDICTED: hypothetical protein [Homo sapiens] 35 0.073 gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens] 32 0.36 gi|33188437 deleted in liver cancer 1 isoform 2 [Homo sapiens] 32 0.36 gi|153792190 neurogenic differentiation 4 [Homo sapiens] 32 0.62 gi|112789532 poliovirus receptor related 2 isoform delta precurs... 31 1.1 gi|24308237 phosphatidylinositol transfer protein, membrane-asso... 31 1.1 gi|13325064 cadherin EGF LAG seven-pass G-type receptor 2 [Homo ... 30 1.4 gi|55953110 retinoblastoma protein-binding zinc finger protein i... 30 1.4 gi|20336260 retinoblastoma protein-binding zinc finger protein i... 30 1.4 gi|20336258 retinoblastoma protein-binding zinc finger protein i... 30 1.4 gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 30 1.4 gi|11276067 snail 2 [Homo sapiens] 30 1.8 gi|120953251 neuron navigator 3 [Homo sapiens] 30 1.8 gi|87162455 hypothetical protein LOC23277 [Homo sapiens] 30 2.3 gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens] 30 2.3 gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens] 30 2.3 gi|145699133 KPL2 protein isoform 1 [Homo sapiens] 29 3.1 gi|153945728 microtubule-associated protein 1B [Homo sapiens] 29 3.1 gi|94721340 SID1 transmembrane family, member 2 [Homo sapiens] 29 3.1 gi|62739186 complement factor H isoform a precursor [Homo sapiens] 29 4.0 gi|118442839 complement factor H-related 1 [Homo sapiens] 29 4.0 gi|239758115 PREDICTED: similar to complement factor H-related 1... 29 4.0 gi|239758113 PREDICTED: similar to complement factor H-related 1... 29 4.0 gi|109826564 neurofibromin isoform 1 [Homo sapiens] 29 4.0 gi|4557793 neurofibromin isoform 2 [Homo sapiens] 29 4.0 gi|122114654 methyltransferase 10 domain containing [Homo sapiens] 29 4.0 >gi|156119599 transmembrane protein 215 [Homo sapiens] Length = 235 Score = 486 bits (1251), Expect = e-138 Identities = 235/235 (100%), Positives = 235/235 (100%) Query: 1 MRPDDINPRTGLVVALVSVFLVFGFMFTVSGMKGETLGNIPLLAIGPAICLPGIAAIALA 60 MRPDDINPRTGLVVALVSVFLVFGFMFTVSGMKGETLGNIPLLAIGPAICLPGIAAIALA Sbjct: 1 MRPDDINPRTGLVVALVSVFLVFGFMFTVSGMKGETLGNIPLLAIGPAICLPGIAAIALA 60 Query: 61 RKTEGCTKWPENELLWVRKLPCFRKPKDKEVVELLRTPSDLESGKGSSDELAKKAGLRGK 120 RKTEGCTKWPENELLWVRKLPCFRKPKDKEVVELLRTPSDLESGKGSSDELAKKAGLRGK Sbjct: 61 RKTEGCTKWPENELLWVRKLPCFRKPKDKEVVELLRTPSDLESGKGSSDELAKKAGLRGK 120 Query: 121 PPPQSQGEVSVASSINSPTPTEEGECQSLVQNGHQEETSRYLDGYCPSGSSLTYSALDVK 180 PPPQSQGEVSVASSINSPTPTEEGECQSLVQNGHQEETSRYLDGYCPSGSSLTYSALDVK Sbjct: 121 PPPQSQGEVSVASSINSPTPTEEGECQSLVQNGHQEETSRYLDGYCPSGSSLTYSALDVK 180 Query: 181 CSARDRSECPEPEDSIFFVPQDSIIVCSYKQNSPYDRYCCYINQIQGRWDHETIV 235 CSARDRSECPEPEDSIFFVPQDSIIVCSYKQNSPYDRYCCYINQIQGRWDHETIV Sbjct: 181 CSARDRSECPEPEDSIFFVPQDSIIVCSYKQNSPYDRYCCYINQIQGRWDHETIV 235 >gi|126012562 low density lipoprotein-related protein 1 [Homo sapiens] Length = 4544 Score = 38.5 bits (88), Expect = 0.005 Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 5/107 (4%) Query: 117 LRGKPPPQSQGEVSVASSINS----PTPTEEGECQSLVQNGHQEETSRYLDGYCPSGSSL 172 LR P Q G ++VA+ NS P G CQ L HQ + G L Sbjct: 2456 LRVDIPQQPMGIIAVANDTNSCELSPCRINNGGCQDLCLLTHQGHVNCSCRGGRILQDDL 2515 Query: 173 TYSALDVKCSARDRSECPEPEDSIFFVPQDSIIVCSYKQNSPYDRYC 219 T A++ C A+D EC E F + D + C K + YC Sbjct: 2516 TCRAVNSSCRAQDEFECANGECINFSLTCDGVPHCKDKSDEK-PSYC 2561 >gi|239746026 PREDICTED: hypothetical protein XP_002344173 [Homo sapiens] Length = 183 Score = 36.2 bits (82), Expect = 0.025 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 10/56 (17%) Query: 69 WPENELLWVRKLPCFRKPKDKEVVELLRTPSDLESGKGSSD---ELAKKAGLRGKP 121 WPEN+L P + P DK V++LLR P + +G+GS L+K L G+P Sbjct: 50 WPENQL------PAYCSP-DKPVLQLLRCPVEEAAGRGSGHFHLSLSKSIALLGRP 98 >gi|239757005 PREDICTED: hypothetical protein [Homo sapiens] Length = 183 Score = 34.7 bits (78), Expect = 0.073 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 10/56 (17%) Query: 69 WPENELLWVRKLPCFRKPKDKEVVELLRTPSDLESGKGSSD---ELAKKAGLRGKP 121 WPEN+L P + P DK V++LLR P + +G+GS L++ L G+P Sbjct: 50 WPENQL------PAYCSP-DKPVLQLLRCPVEEAAGRGSGHFHLSLSESIALLGRP 98 >gi|239751519 PREDICTED: hypothetical protein [Homo sapiens] Length = 183 Score = 34.7 bits (78), Expect = 0.073 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 10/56 (17%) Query: 69 WPENELLWVRKLPCFRKPKDKEVVELLRTPSDLESGKGSSD---ELAKKAGLRGKP 121 WPEN+L P + P DK V++LLR P + +G+GS L++ L G+P Sbjct: 50 WPENQL------PAYCSP-DKPVLQLLRCPVEEAAGRGSGHFHLSLSESIALLGRP 98 >gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens] Length = 1528 Score = 32.3 bits (72), Expect = 0.36 Identities = 24/124 (19%), Positives = 53/124 (42%), Gaps = 10/124 (8%) Query: 81 PCFRKPKDKEVVELLRTP--SDLESGKGSSDELAKKAGLRGKPPPQSQGEVSVASSINSP 138 P ++ D+E ++ L S L + + + K++ S + +S++++P Sbjct: 697 PILQEGMDEEKLKQLNCVEISALNGNRINVPMVRKRSVSNSTQTSSSSSQSETSSAVSTP 756 Query: 139 TPTEEGECQSLVQNGHQEETSRYLDGYCPSGSSLTYSALDVKCSARDRSECPEPEDSIFF 198 +P S + YL+G+ P S + ++ R+ PED++F+ Sbjct: 757 SPVTRTRSLSACN----KRVGMYLEGFDPFNQSTFNNVVEQNFKNRESY----PEDTVFY 808 Query: 199 VPQD 202 +P+D Sbjct: 809 IPED 812 >gi|33188437 deleted in liver cancer 1 isoform 2 [Homo sapiens] Length = 1091 Score = 32.3 bits (72), Expect = 0.36 Identities = 24/124 (19%), Positives = 53/124 (42%), Gaps = 10/124 (8%) Query: 81 PCFRKPKDKEVVELLRTP--SDLESGKGSSDELAKKAGLRGKPPPQSQGEVSVASSINSP 138 P ++ D+E ++ L S L + + + K++ S + +S++++P Sbjct: 260 PILQEGMDEEKLKQLNCVEISALNGNRINVPMVRKRSVSNSTQTSSSSSQSETSSAVSTP 319 Query: 139 TPTEEGECQSLVQNGHQEETSRYLDGYCPSGSSLTYSALDVKCSARDRSECPEPEDSIFF 198 +P S + YL+G+ P S + ++ R+ PED++F+ Sbjct: 320 SPVTRTRSLSACN----KRVGMYLEGFDPFNQSTFNNVVEQNFKNRESY----PEDTVFY 371 Query: 199 VPQD 202 +P+D Sbjct: 372 IPED 375 >gi|153792190 neurogenic differentiation 4 [Homo sapiens] Length = 331 Score = 31.6 bits (70), Expect = 0.62 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 21/116 (18%) Query: 87 KDKEVVELLRTPSDLESGKGSSDELAKKAGLRGKPPPQSQGEVSVASSINSPTPTEEGEC 146 K KE+ EL+ TPS ++ G GS +E+ K G + SS+ TEE + Sbjct: 7 KSKEMGELVNTPSWMDKGLGSQNEV--------KEEESRPGTYGMLSSL-----TEEHD- 52 Query: 147 QSLVQNGHQEETSRYLDGYCPSGSSLTYSALD------VKCSARDRSECPEPEDSI 196 S+ + +EE P +T + L+ VK +AR+R+ D++ Sbjct: 53 -SIEEEEEEEEDGEKPKRRGPKKKKMTKARLERFRARRVKANARERTRMHGLNDAL 107 >gi|112789532 poliovirus receptor related 2 isoform delta precursor [Homo sapiens] Length = 538 Score = 30.8 bits (68), Expect = 1.1 Identities = 44/169 (26%), Positives = 63/169 (37%), Gaps = 25/169 (14%) Query: 30 SGMKGETLGNIPLLAIGPAICLPGIAAIALARKTEGCTKWPENELLWVRKLPCFRKPKDK 89 +G G +G I I A+ GI RK + E+E L P ++ P K Sbjct: 355 AGATGGIIGGIIAAIIATAVAATGILICRQQRKEQTLQGAEEDEDL--EGPPSYKPPTPK 412 Query: 90 EVVELLRTPSDLESGKGSSDELAKK-----AG----------------LRGKPPPQSQGE 128 +E PS L + G+S+ K AG L + P G Sbjct: 413 AKLEAQEMPSQLFT-LGASEHSPLKTPYFDAGASCTEQEMPRYHELPTLEERSGPLHPGA 471 Query: 129 VSVASSINSPTPTEEGECQSL-VQNGHQEETSRYLDGYCPSGSSLTYSA 176 S+ S I P E SL +++ EE YLD P +L+YS+ Sbjct: 472 TSLGSPIPVPPGPPAVEDVSLDLEDEEGEEEEEYLDKINPIYDALSYSS 520 >gi|24308237 phosphatidylinositol transfer protein, membrane-associated 2 [Homo sapiens] Length = 1349 Score = 30.8 bits (68), Expect = 1.1 Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 22/167 (13%) Query: 71 ENELLWVRKLPCFRKPKDKEVVELLRTPSDLESGKGSSDELAKKAGL----RGKPPPQSQ 126 E +L+ RK+ F + + E EL++ + + G E + G RG S Sbjct: 248 EAQLMLSRKMAQFNEDGE-EATELVKHEAVSDQTSGEPPEPSSSNGEPLVGRGLKKQWST 306 Query: 127 GEVSVASSINSPTPTE----EGECQSLVQNGHQEETSRYLDGYCPSGSSLTYSALDV-KC 181 S SS +P+ E QS+ ++ + + D + + D+ K Sbjct: 307 SSKSSRSSKRGASPSRHSISEWRMQSIARDSDESSDDEFFDAHEDLSDTEEMFPKDITKW 366 Query: 182 SARD---RSECPEPEDSIFFVPQDSIIVCSYKQNSPYDRYCCYINQI 225 S+ D + E PEPED+ QD + Y+Q +P R + Q+ Sbjct: 367 SSNDLMDKIESPEPEDT-----QDGL----YRQGAPEFRVASSVEQL 404 >gi|13325064 cadherin EGF LAG seven-pass G-type receptor 2 [Homo sapiens] Length = 2923 Score = 30.4 bits (67), Expect = 1.4 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 86 PKDKEVVELLRTPSDLESGKGSSDELAKKAGLRGKPPPQSQGEVSVASSINSPTP 140 P E LLR P LE GSS + G RG PPP+ S+ +N P Sbjct: 2845 PTISEKSSLLRLP--LEQCTGSSRGSSASEGSRGGPPPRPPPRQSLQEQLNGVMP 2897 >gi|55953110 retinoblastoma protein-binding zinc finger protein isoform c [Homo sapiens] Length = 1481 Score = 30.4 bits (67), Expect = 1.4 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 113 KKAGLRGKPPPQSQGEVSVASSINSPTPTEEGECQSL----VQNGHQEETSRYLDG 164 +K GL PP Q + + + S P EEGE + + + E + Y+DG Sbjct: 316 RKGGLEEPQPPAEQAQATQNVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDG 371 >gi|20336260 retinoblastoma protein-binding zinc finger protein isoform b [Homo sapiens] Length = 1682 Score = 30.4 bits (67), Expect = 1.4 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 113 KKAGLRGKPPPQSQGEVSVASSINSPTPTEEGECQSL----VQNGHQEETSRYLDG 164 +K GL PP Q + + + S P EEGE + + + E + Y+DG Sbjct: 517 RKGGLEEPQPPAEQAQATQNVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDG 572 >gi|20336258 retinoblastoma protein-binding zinc finger protein isoform a [Homo sapiens] Length = 1718 Score = 30.4 bits (67), Expect = 1.4 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 113 KKAGLRGKPPPQSQGEVSVASSINSPTPTEEGECQSL----VQNGHQEETSRYLDG 164 +K GL PP Q + + + S P EEGE + + + E + Y+DG Sbjct: 517 RKGGLEEPQPPAEQAQATQNVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDG 572 >gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] Length = 1163 Score = 30.4 bits (67), Expect = 1.4 Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 27/120 (22%) Query: 99 SDLESGKGSSD----ELAKKAGLRGKPPPQSQGE------------VSVASSINSPTPTE 142 SD ES SSD E ++ A +PPP ++ + VS ASS++S P+ Sbjct: 440 SDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNPHKVSPASSVDSNIPSS 499 Query: 143 EGECQSLVQNGHQEET-SRYLDGYCPSGSSLTYSALDVKC------SARDRSECPEPEDS 195 +G + G ++ T + Y D P +S D K S R R + P DS Sbjct: 500 QG----YKKEGREQGTGNSYTDTSGPKETSSATPGRDSKTIQKGSESGRGRQKSPAQSDS 555 >gi|11276067 snail 2 [Homo sapiens] Length = 268 Score = 30.0 bits (66), Expect = 1.8 Identities = 27/93 (29%), Positives = 35/93 (37%), Gaps = 10/93 (10%) Query: 98 PSDLESGKGSSDELAKKAGLRGKPPPQSQGEVSVASSINSPTPTEEGECQSLVQNGHQEE 157 P+ L G S L R PPP S S SP EE QS + + H E Sbjct: 70 PNGLSPLSGYSSSLG-----RVSPPPPSDTSSKDHSGSESPISDEEERLQSKLSDPHAIE 124 Query: 158 TSRYLDGYCPSGSSLTYSAL----DVKCSARDR 186 ++ C S T+S L + C A+ R Sbjct: 125 AEKFQCNLCNKTYS-TFSGLAKHKQLHCDAQSR 156 >gi|120953251 neuron navigator 3 [Homo sapiens] Length = 2363 Score = 30.0 bits (66), Expect = 1.8 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%) Query: 94 LLRTPSDLESGKGSSDELAKKAGLRGKPPPQSQGEVSVASSINSPTPTEEGECQSLVQNG 153 L R+PSD +GK S DE GK PP G + SS P+ G + +G Sbjct: 1034 LQRSPSD--AGKSSGDE--------GKKPPSGIGRSTATSSFGFKKPSGVGSSAMITSSG 1083 >gi|87162455 hypothetical protein LOC23277 [Homo sapiens] Length = 1309 Score = 29.6 bits (65), Expect = 2.3 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Query: 95 LRTPSDLESGKGSSDELAKKAGLRGKPPPQSQGEVSVASSINSPTPTEEGECQSLVQNGH 154 L TPS LE+G SS E + PP Q G SS + +E +G Sbjct: 636 LETPSSLENGGPSSLESKSE-----DPPGQEAGSEEEGSSASGLAKVKELAETIAADDGT 690 Query: 155 QEETSRYLDGYCPSGSSLTYSALDVK 180 + + C + S++ +A D++ Sbjct: 691 DPRSREVIRNACKAVGSISSTAFDIR 716 >gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens] Length = 371 Score = 29.6 bits (65), Expect = 2.3 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 84 RKPKDKEVVELLRTPSDLESGKGSSDE--LAKKAG-LRGKPPPQSQGEVSVASSINSPT 139 +K K +E + TP + K S + ++KKAG +G + QGEVS A+S +S T Sbjct: 116 KKRGSKGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKQGEVSKAASADSTT 174 >gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens] Length = 371 Score = 29.6 bits (65), Expect = 2.3 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 84 RKPKDKEVVELLRTPSDLESGKGSSDE--LAKKAG-LRGKPPPQSQGEVSVASSINSPT 139 +K K +E + TP + K S + ++KKAG +G + QGEVS A+S +S T Sbjct: 116 KKRGSKGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKQGEVSKAASADSTT 174 >gi|145699133 KPL2 protein isoform 1 [Homo sapiens] Length = 1822 Score = 29.3 bits (64), Expect = 3.1 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Query: 121 PPPQSQGEVSVASS-INSPTPTEEGECQSLVQNGHQE 156 PPP+ + E + S + S TPT +G+ QS +G QE Sbjct: 918 PPPEPEKEKEIHQSHVASKTPTAKGKPQSEAPHGKQE 954 >gi|153945728 microtubule-associated protein 1B [Homo sapiens] Length = 2468 Score = 29.3 bits (64), Expect = 3.1 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 8/83 (9%) Query: 122 PPQSQGEVSVASSINSPTPTEEGECQSLVQNGH--QEETSRYLDGYCPSGSSLTYSALD- 178 PP S E S S +S P E EC S+ + + E+ S + P+ ++TY +D Sbjct: 2146 PPTSVSE-SAPSQTDSDVPPETEECPSITADANIDSEDESETI----PTDKTVTYKHMDP 2200 Query: 179 VKCSARDRSECPEPEDSIFFVPQ 201 +DRS P D P+ Sbjct: 2201 PPAPVQDRSPSPRHPDVSMVDPE 2223 >gi|94721340 SID1 transmembrane family, member 2 [Homo sapiens] Length = 832 Score = 29.3 bits (64), Expect = 3.1 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Query: 1 MRPDDINPRTGLVVALVSVFLVFGFMFTVSGMKGETLGNIPLLAIGPAICLPGIAAIALA 60 MRP+D L + + ++ L F F + GE + IPLL I +C + AL Sbjct: 709 MRPNDFASYL-LAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCI---VCTSVVWGFALF 764 Query: 61 RKTEGCTKW 69 +G + W Sbjct: 765 FFFQGLSTW 773 >gi|62739186 complement factor H isoform a precursor [Homo sapiens] Length = 1231 Score = 28.9 bits (63), Expect = 4.0 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 116 GLRGKPPPQSQGEV-SVASSINSPTPTEEGECQSLVQ-NGHQEETSR 160 G G PPP G++ S S+ +P + E +CQ+L Q G++ T R Sbjct: 1107 GKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR 1153 >gi|118442839 complement factor H-related 1 [Homo sapiens] Length = 330 Score = 28.9 bits (63), Expect = 4.0 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 116 GLRGKPPPQSQGEV-SVASSINSPTPTEEGECQSLVQ-NGHQEETSR 160 G G PPP G++ S S+ +P + E +CQ+L Q G++ T R Sbjct: 206 GKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR 252 >gi|239758115 PREDICTED: similar to complement factor H-related 1 isoform 2 [Homo sapiens] Length = 271 Score = 28.9 bits (63), Expect = 4.0 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 116 GLRGKPPPQSQGEV-SVASSINSPTPTEEGECQSLVQ-NGHQEETSR 160 G G PPP G++ S S+ +P + E +CQ+L Q G++ T R Sbjct: 147 GKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR 193 >gi|239758113 PREDICTED: similar to complement factor H-related 1 isoform 1 [Homo sapiens] Length = 330 Score = 28.9 bits (63), Expect = 4.0 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 116 GLRGKPPPQSQGEV-SVASSINSPTPTEEGECQSLVQ-NGHQEETSR 160 G G PPP G++ S S+ +P + E +CQ+L Q G++ T R Sbjct: 206 GKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR 252 >gi|109826564 neurofibromin isoform 1 [Homo sapiens] Length = 2839 Score = 28.9 bits (63), Expect = 4.0 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 4/43 (9%) Query: 93 ELLRTP-SDLESGKGSSDELAKKAGLRGKPP--PQSQGEVSVA 132 ELLRTP + L GKG+S + AG G PP Q+Q ++ VA Sbjct: 649 ELLRTPGASLRKGKGNSS-MDSAAGCSGTPPICRQAQTKLEVA 690 >gi|4557793 neurofibromin isoform 2 [Homo sapiens] Length = 2818 Score = 28.9 bits (63), Expect = 4.0 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 4/43 (9%) Query: 93 ELLRTP-SDLESGKGSSDELAKKAGLRGKPP--PQSQGEVSVA 132 ELLRTP + L GKG+S + AG G PP Q+Q ++ VA Sbjct: 649 ELLRTPGASLRKGKGNSS-MDSAAGCSGTPPICRQAQTKLEVA 690 >gi|122114654 methyltransferase 10 domain containing [Homo sapiens] Length = 562 Score = 28.9 bits (63), Expect = 4.0 Identities = 36/120 (30%), Positives = 50/120 (41%), Gaps = 20/120 (16%) Query: 67 TKWPENELLWVRKLPCFRKPKDKEVVELLRTPSDLESGKGSSDELAKKAGLRGKP---PP 123 T W E ++L K+ R P KE V L T + S L +K R + P Sbjct: 343 TTWIE-KILTDLKVQHKRVPCGKEEVSLFLTAIE-----NSWIHLRRKKRERVRQLREVP 396 Query: 124 QSQGEVSVASSINSPTPTEEGECQSLVQNGHQEET----------SRYLDGYCPSGSSLT 173 ++ +V A PTP E G Q L + G QE T + ++G CPS SL+ Sbjct: 397 RAPEDVIQALEEKKPTPKESGNSQELAR-GPQERTPCGPALREGEAAAVEGPCPSQESLS 455 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.135 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,534,361 Number of Sequences: 37866 Number of extensions: 527155 Number of successful extensions: 1740 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 48 Number of HSP's that attempted gapping in prelim test: 1732 Number of HSP's gapped (non-prelim): 58 length of query: 235 length of database: 18,247,518 effective HSP length: 99 effective length of query: 136 effective length of database: 14,498,784 effective search space: 1971834624 effective search space used: 1971834624 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.