Guide to the Human Genome
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Name: PIGO Sequence: fasta or formatted (672aa) NCBI GI: 38045917
Description:

phosphatidylinositol glycan anchor biosynthesis, class O isoform 2

Referenced in:

GPI Anchoring

Other entries for this name:
alt prot [1089aa] phosphatidylinositol glycan anchor biosynthesis, class O isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         67           2
 C cysteine            1.3          9           1
 D aspartate           3.7         25           2
 E glutamate           4.8         32           5
 F phenylalanine       6.5         44           3
 G glycine             7.0         47           2
 H histidine           4.0         27           2
 I isoleucine          3.6         24           1
 K lysine              2.5         17           2
 L leucine            14.0         94           4
 M methionine          2.2         15           1
 N asparagine          1.8         12           1
 P proline             7.0         47           2
 Q glutamine           5.7         38           2
 R arginine            4.2         28           2
 S serine              7.3         49           2
 T threonine           4.6         31           3
 V valine              6.4         43           2
 W tryptophan          2.1         14           1
 Y tyrosine            1.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol glycan anchor biosynthesis, cla... 
PIGO                  0.660   phosphatidylinositol glycan anchor biosynthesis, cla...
PIGG                  0.135   phosphatidylinositol glycan anchor biosynthesis, cl...
PIGG                  0.135   phosphatidylinositol glycan anchor biosynthesis, cl...
PIGN                  0.019   phosphatidylinositol glycan anchor biosynthesis, clas...
PIGN                  0.019   phosphatidylinositol glycan anchor biosynthesis, cla...
ENPP7                 0.015   ectonucleotide pyrophosphatase/phosphodiesterase 7 [...
ENPP2                 0.011   autotaxin isoform 3 preproprotein 
ENPP2                 0.011   autotaxin isoform 2 preproprotein 
ENPP5                 0.007   ectonucleotide pyrophosphatase/phosphodiesterase 5 (...
ENPP1                 0.007   ectonucleotide pyrophosphatase/phosphodiesterase 1 ...
ENPP6                 0.006   ectonucleotide pyrophosphatase/phosphodiesterase 6 [...
ACOX3                 0.006   acyl-Coenzyme A oxidase 3 isoform b 
LOC729213             0.005   PREDICTED: similar to ectonucleotide pyrophosphatas...
ACOX3                 0.005   acyl-Coenzyme A oxidase 3 isoform a 
STS                   0.005   steryl-sulfatase precursor 
IDS                   0.005   iduronate-2-sulfatase isoform a precursor 
SCARB1                0.004   scavenger receptor class B, member 1 isoform 2 [Hom...
MEOX2                 0.004   mesenchyme homeobox 2 
RHOBTB1               0.004   Rho-related BTB domain containing 1 
SLC12A9               0.004   solute carrier family 12 (potassium/chloride transpo...
KLF14                 0.004   Kruppel-like factor 14 
ZNF438                0.004   zinc finger protein 438 isoform b 
ZNF438                0.004   zinc finger protein 438 isoform b 
ZNF438                0.004   zinc finger protein 438 isoform c 
ZNF438                0.004   zinc finger protein 438 isoform a 
ZNF438                0.004   zinc finger protein 438 isoform a 
ZNF438                0.004   zinc finger protein 438 isoform a 
ZNF438                0.004   zinc finger protein 438 isoform a 
TRIP11                0.004   thyroid hormone receptor interactor 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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