MCCD1 5801

Name: MCCD1	Sequence: fasta or formatted (119aa)		NCBI GI: 155969718
Description: mitochondrial coiled-coil domain 1		Referenced in: Coiled-Coil Proteins Mitochondria
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 10 1 C cysteine 1.7 2 2 D aspartate 0.0 0 0 E glutamate 10.1 12 2 F phenylalanine 0.8 1 1 G glycine 9.2 11 3 H histidine 3.4 4 1 I isoleucine 0.8 1 1 K lysine 4.2 5 1 L leucine 16.0 19 3 M methionine 3.4 4 1 N asparagine 1.7 2 1 P proline 6.7 8 2 Q glutamine 9.2 11 2 R arginine 6.7 8 2 S serine 8.4 10 2 T threonine 3.4 4 1 V valine 1.7 2 1 W tryptophan 2.5 3 1 Y tyrosine 1.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mitochondrial coiled-coil domain 1 SYNE1 0.032 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.032 spectrin repeat containing, nuclear envelope 1 isof... TRIP12 0.027 thyroid hormone receptor interactor 12 CEP110 0.023 centrosomal protein 110kDa LOC100293327 0.023 PREDICTED: hypothetical protein LOC100291252 0.023 PREDICTED: hypothetical protein XP_002347634 LOC100287254 0.023 PREDICTED: hypothetical protein XP_002343484 CSGALNACT2 0.023 chondroitin sulfate N-acetylgalactosaminyltransferas... SFRS16 0.023 splicing factor, arginine/serine-rich 16 MYO5A 0.018 myosin VA isoform 1 CENPE 0.018 centromere protein E SFPQ 0.018 splicing factor proline/glutamine rich (polypyrimidin... CENPH 0.014 centromere protein H MYST3 0.014 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.014 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.014 MYST histone acetyltransferase (monocytic leukemia)... LOC400558 0.014 PREDICTED: hypothetical protein LOC400558 LOC400558 0.014 PREDICTED: hypothetical protein LOC400558 LOC644253 0.014 PREDICTED: similar to mitogen-activated protein kin... LOC400558 0.014 PREDICTED: hypothetical protein LOC400558 LOC100294344 0.014 PREDICTED: similar to mitogen-activated protein kin... ARHGEF12 0.014 Rho guanine nucleotide exchange factor (GEF) 12 [Homo... PLEKHG3 0.014 pleckstrin homology domain containing, family G, mem... CCDC39 0.014 coiled-coil domain containing 39 ZNF853 0.014 zinc finger protein 853 MYO5A 0.014 myosin VA isoform 2 PLEKHO1 0.014 pleckstrin homology domain containing, family O memb... TTC1 0.014 tetratricopeptide repeat domain 1 CCDC64 0.014 coiled-coil domain containing 64 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.