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Search of human proteins with 154689769
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154689769 folliculin interacting protein 2 [Homo sapiens]
(1114 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154689769 folliculin interacting protein 2 [Homo sapiens] 2233 0.0
gi|120953264 folliculin interacting protein 1 isoform 2 [Homo sa... 678 0.0
gi|120953291 folliculin interacting protein 1 isoform 1 [Homo sa... 670 0.0
gi|8923040 CDKN2A interacting protein [Homo sapiens] 40 0.012
gi|67782356 corneodesmosin precursor [Homo sapiens] 37 0.10
gi|102468717 mediator complex subunit 13 [Homo sapiens] 37 0.14
gi|28559039 mediator complex subunit 1 [Homo sapiens] 36 0.23
gi|9966841 cell death regulator aven [Homo sapiens] 35 0.30
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 35 0.30
gi|120953251 neuron navigator 3 [Homo sapiens] 35 0.30
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.30
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 35 0.52
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 34 0.68
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 34 0.68
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 34 0.68
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 34 0.68
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 34 0.68
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 34 0.88
gi|23397642 GREB1 protein isoform a [Homo sapiens] 33 1.2
gi|171906569 seipin isoform 1 [Homo sapiens] 33 1.2
gi|195230753 seipin isoform 1 [Homo sapiens] 33 1.2
gi|55750053 atrophin-1 [Homo sapiens] 33 1.2
gi|55750041 atrophin-1 [Homo sapiens] 33 1.2
gi|40068505 seipin isoform 2 [Homo sapiens] 33 1.2
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens] 33 1.2
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] 33 1.2
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens] 33 1.2
gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens] 33 1.2
gi|4505379 nuclear factor erythroid 2-like 1 [Homo sapiens] 33 1.5
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 33 1.5
>gi|154689769 folliculin interacting protein 2 [Homo sapiens]
Length = 1114
Score = 2233 bits (5787), Expect = 0.0
Identities = 1114/1114 (100%), Positives = 1114/1114 (100%)
Query: 1 MAPTLLQKLFNKRGSSGSSAAASAQGRAPKEGPAFSWSCSEFDLNEIRLIVYQDCDRRGR 60
MAPTLLQKLFNKRGSSGSSAAASAQGRAPKEGPAFSWSCSEFDLNEIRLIVYQDCDRRGR
Sbjct: 1 MAPTLLQKLFNKRGSSGSSAAASAQGRAPKEGPAFSWSCSEFDLNEIRLIVYQDCDRRGR 60
Query: 61 QVLFDSKAVQKIEEVTAQKTEDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAK 120
QVLFDSKAVQKIEEVTAQKTEDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAK
Sbjct: 61 QVLFDSKAVQKIEEVTAQKTEDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAK 120
Query: 121 EQLPKYQYTRPASDVNMLGEMMFGSVAMSYKGSTLKIHYIRSPPQLMISKVFSARMGSFC 180
EQLPKYQYTRPASDVNMLGEMMFGSVAMSYKGSTLKIHYIRSPPQLMISKVFSARMGSFC
Sbjct: 121 EQLPKYQYTRPASDVNMLGEMMFGSVAMSYKGSTLKIHYIRSPPQLMISKVFSARMGSFC 180
Query: 181 GSTNNLQDSFEYINQDPNLGKLNTNQNSLGPCRTGSNLAHSTPVDMPSRGQNEDRDSGIA 240
GSTNNLQDSFEYINQDPNLGKLNTNQNSLGPCRTGSNLAHSTPVDMPSRGQNEDRDSGIA
Sbjct: 181 GSTNNLQDSFEYINQDPNLGKLNTNQNSLGPCRTGSNLAHSTPVDMPSRGQNEDRDSGIA 240
Query: 241 RSASLSSLLITPFPSPSSSTSSSSSYQRRWLRSQTTSLENGIIPRRSTDETFSLAEETCS 300
RSASLSSLLITPFPSPSSSTSSSSSYQRRWLRSQTTSLENGIIPRRSTDETFSLAEETCS
Sbjct: 241 RSASLSSLLITPFPSPSSSTSSSSSYQRRWLRSQTTSLENGIIPRRSTDETFSLAEETCS 300
Query: 301 SNPAMVRRKKIAISIIFSLCEKEEAQRNFQDFFFSHFPLFESHMNRLKSAIEKAMISCRK 360
SNPAMVRRKKIAISIIFSLCEKEEAQRNFQDFFFSHFPLFESHMNRLKSAIEKAMISCRK
Sbjct: 301 SNPAMVRRKKIAISIIFSLCEKEEAQRNFQDFFFSHFPLFESHMNRLKSAIEKAMISCRK 360
Query: 361 IAESSLRVQFYVSRLMEALGEFRGTIWNLYSVPRIAEPVWLTMMSGTLEKNQLCQRFLKE 420
IAESSLRVQFYVSRLMEALGEFRGTIWNLYSVPRIAEPVWLTMMSGTLEKNQLCQRFLKE
Sbjct: 361 IAESSLRVQFYVSRLMEALGEFRGTIWNLYSVPRIAEPVWLTMMSGTLEKNQLCQRFLKE 420
Query: 421 FTLLIEQINKNQFFAALLTAVLTYHLAWVPTVMPVDHPPIKAFSEKRTSQSVNMLAKTHP 480
FTLLIEQINKNQFFAALLTAVLTYHLAWVPTVMPVDHPPIKAFSEKRTSQSVNMLAKTHP
Sbjct: 421 FTLLIEQINKNQFFAALLTAVLTYHLAWVPTVMPVDHPPIKAFSEKRTSQSVNMLAKTHP 480
Query: 481 YNPLWAQLGDLYGAIGSPVRLTRTVVVGKQKDLVQRILYVLTYFLRCSELQENQLTWSGN 540
YNPLWAQLGDLYGAIGSPVRLTRTVVVGKQKDLVQRILYVLTYFLRCSELQENQLTWSGN
Sbjct: 481 YNPLWAQLGDLYGAIGSPVRLTRTVVVGKQKDLVQRILYVLTYFLRCSELQENQLTWSGN 540
Query: 541 HGEGDQVLNGSKIITALEKGEVEESEYVVITVRNEPALVPPILPPTAAERHNPWPTGFPE 600
HGEGDQVLNGSKIITALEKGEVEESEYVVITVRNEPALVPPILPPTAAERHNPWPTGFPE
Sbjct: 541 HGEGDQVLNGSKIITALEKGEVEESEYVVITVRNEPALVPPILPPTAAERHNPWPTGFPE 600
Query: 601 CPEGTDSRDLGLKPDKEANRRPEQGSEACSAGCLGPASDASWKPQNAFCGDEKNKEAPQD 660
CPEGTDSRDLGLKPDKEANRRPEQGSEACSAGCLGPASDASWKPQNAFCGDEKNKEAPQD
Sbjct: 601 CPEGTDSRDLGLKPDKEANRRPEQGSEACSAGCLGPASDASWKPQNAFCGDEKNKEAPQD 660
Query: 661 GSSRLPSCEVLGAGMKMDQQAVCELLKVEMPTRLPDRSVAWPCPDRHLREKPSLEKVTFQ 720
GSSRLPSCEVLGAGMKMDQQAVCELLKVEMPTRLPDRSVAWPCPDRHLREKPSLEKVTFQ
Sbjct: 661 GSSRLPSCEVLGAGMKMDQQAVCELLKVEMPTRLPDRSVAWPCPDRHLREKPSLEKVTFQ 720
Query: 721 IGSFASPESDFESRMKKMEERVKACGPSLEASEAADVAQDPQVSRSPFKPGFQENVCCPQ 780
IGSFASPESDFESRMKKMEERVKACGPSLEASEAADVAQDPQVSRSPFKPGFQENVCCPQ
Sbjct: 721 IGSFASPESDFESRMKKMEERVKACGPSLEASEAADVAQDPQVSRSPFKPGFQENVCCPQ 780
Query: 781 NRLSEGDEGESDKGFAEDRGSRNDMAADIAGQLSHAADLGTASHGAGGTGGRRLEATRGL 840
NRLSEGDEGESDKGFAEDRGSRNDMAADIAGQLSHAADLGTASHGAGGTGGRRLEATRGL
Sbjct: 781 NRLSEGDEGESDKGFAEDRGSRNDMAADIAGQLSHAADLGTASHGAGGTGGRRLEATRGL 840
Query: 841 YVKAAEGPVLEPVAPRCVQRGPGLVAGANIPCGDDNKKANFRTEGDIPRNESSDSALGDS 900
YVKAAEGPVLEPVAPRCVQRGPGLVAGANIPCGDDNKKANFRTEGDIPRNESSDSALGDS
Sbjct: 841 YVKAAEGPVLEPVAPRCVQRGPGLVAGANIPCGDDNKKANFRTEGDIPRNESSDSALGDS 900
Query: 901 DDEACASAMLDLGHGGDRTGGSLEVELPLPRSQSISTQNVRNFGRSLLAGYCPTYMPDLV 960
DDEACASAMLDLGHGGDRTGGSLEVELPLPRSQSISTQNVRNFGRSLLAGYCPTYMPDLV
Sbjct: 901 DDEACASAMLDLGHGGDRTGGSLEVELPLPRSQSISTQNVRNFGRSLLAGYCPTYMPDLV 960
Query: 961 LHGTGSDEKLKQCLVADLVHTVHHPVLDEPIAEAVCIIADTDKWSVQVATSQRKVTDNMK 1020
LHGTGSDEKLKQCLVADLVHTVHHPVLDEPIAEAVCIIADTDKWSVQVATSQRKVTDNMK
Sbjct: 961 LHGTGSDEKLKQCLVADLVHTVHHPVLDEPIAEAVCIIADTDKWSVQVATSQRKVTDNMK 1020
Query: 1021 LGQDVLVSSQVSSLLQSILQLYKLHLPADFCIMHLEDRLQEMYLKSKMLSEYLRGHTRVH 1080
LGQDVLVSSQVSSLLQSILQLYKLHLPADFCIMHLEDRLQEMYLKSKMLSEYLRGHTRVH
Sbjct: 1021 LGQDVLVSSQVSSLLQSILQLYKLHLPADFCIMHLEDRLQEMYLKSKMLSEYLRGHTRVH 1080
Query: 1081 VKELGVVLGIESNDLPLLTAIASTHSPYVAQILL 1114
VKELGVVLGIESNDLPLLTAIASTHSPYVAQILL
Sbjct: 1081 VKELGVVLGIESNDLPLLTAIASTHSPYVAQILL 1114
>gi|120953264 folliculin interacting protein 1 isoform 2 [Homo
sapiens]
Length = 1138
Score = 678 bits (1750), Expect = 0.0
Identities = 401/764 (52%), Positives = 500/764 (65%), Gaps = 38/764 (4%)
Query: 1 MAPTLLQKLFNKRGSSGSSAAASAQGRAPKEGPAFSWSCSEFDLNEIRLIVYQDCDRRGR 60
MAPTL QKLF+KR G A R P G FSW EFD ++IRLIVYQDC+RRGR
Sbjct: 1 MAPTLFQKLFSKRTGLG---APGRDARDPDCG--FSWPLPEFDPSQIRLIVYQDCERRGR 55
Query: 61 QVLFDSKAVQKIEEVTAQKT-EDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHA 119
VLFDS ++ E+++ K D +K+ KCCQ SSSS S SSS
Sbjct: 56 NVLFDSSVKRRNEDISVSKLCSDAQVKVFGKCCQLKPGGDSSSSLDSSVTSSSD-----I 110
Query: 120 KEQLPKYQYTRPASDVNMLGEMMFGSVAMSYKGSTLKIHYIRSPPQLMISKVFSARMGS- 178
K+Q KYQ +R +SD NMLGEMMFGSVAMSYKGSTLKIH IRSPPQLM+SKVF+AR GS
Sbjct: 111 KDQCLKYQGSRCSSDANMLGEMMFGSVAMSYKGSTLKIHQIRSPPQLMLSKVFTARTGSS 170
Query: 179 FCGSTNNLQDSFEYINQDPNLGKLNTNQNSLGPCRTGSNLAHSTPVDMPSRGQNEDRDSG 238
CGS N LQDS E+INQD N K + N G N+ HS P+DMP R NEDRDSG
Sbjct: 171 ICGSLNTLQDSLEFINQDNNTLKADNNTVINGLL---GNIVHSNPMDMPGRELNEDRDSG 227
Query: 239 IARSASLSSLLITPFPSPSSSTSSS--SSYQRRWLRSQTTSLENGIIPRRSTDETFSLAE 296
IARSASLSSLLITPFPSP+SS + S SSYQRRW RSQTTSLENG+ PR S +E+F+L++
Sbjct: 228 IARSASLSSLLITPFPSPNSSLTRSCASSYQRRWRRSQTTSLENGVFPRWSIEESFNLSD 287
Query: 297 ETCSSNPAMVRRKKIAISIIFSLCEKEEAQRNFQDFFFSHFPLFESHMNRLKSAIEKAMI 356
E+C NP +VR+KKIAI +IFSL + E+ F +FFFSHFPLFESHMN+LKSAIE+AM
Sbjct: 288 ESCGPNPGIVRKKKIAIGVIFSLSKDEDENNKFNEFFFSHFPLFESHMNKLKSAIEQAMK 347
Query: 357 SCRKIAESSLRVQFYVSRLMEALGEFRGTIWNLYSVPRIAEPVWLTMMSGTLEKNQLCQR 416
R+ A++S R Y +R+++AL EFR TI NLY++PRI EPVWLTMMSGT EKN LC R
Sbjct: 348 MSRRSADASQRSLAY-NRIVDALNEFRTTICNLYTMPRIGEPVWLTMMSGTPEKNHLCYR 406
Query: 417 FLKEFTLLIEQINKNQFFAALLTAVLTYHLAWVPTVMPVDHPPIKAFSEKRTSQSVNMLA 476
F+KEFT L+E +KNQF AL+TAVLT HLAWVPTVMP PPIK F EK +SQSV+MLA
Sbjct: 407 FMKEFTFLMENASKNQFLPALITAVLTNHLAWVPTVMPNGQPPIKIFLEKHSSQSVDMLA 466
Query: 477 KTHPYNPLWAQLGDLYGAIGSPVRLTRTVVVGKQKDLVQRILYVLTYFLRCSELQENQLT 536
KTHPYNPLWAQLGDLYGAIGSPVRL RTVVVGK++D+VQR+LY LTYF+RCSELQE L
Sbjct: 467 KTHPYNPLWAQLGDLYGAIGSPVRLARTVVVGKRQDMVQRLLYFLTYFIRCSELQETHLL 526
Query: 537 WSGNHGEGDQVLNGSKIITALEKGEVEESEYVVITV-RNEPALVPPILPPTAAERHNPWP 595
+G + V+ G+ I T LEKGE+EESEYV++T+ RN+ +L+ N
Sbjct: 527 ENGE--DEAIVMPGTVITTTLEKGEIEESEYVLVTMHRNKSSLLFKESEEIRTPNCNCKY 584
Query: 596 TGFPECPEGTDSRDLGLKPDKEANRRPEQG-SEACSAGCLGPASDAS------WKPQNAF 648
P + ++ + D + + + G S+ C + + ++ +
Sbjct: 585 CSHPLLGQNVENISQQEREDIQNSSKELLGISDECQMISPSDCQEENAVDVKQYRDKLRT 644
Query: 649 CGDEKNKEAPQDGSSRLPSCEVLGAGMKMDQQA--VCELLKVEMPTRLPDRS----VAWP 702
C D K + GS + C + +G++ ++ +LL + T RS V
Sbjct: 645 CFDAKLETVVCTGSVPVDKCALSESGLESTEETWQSEKLLDSDSHTGKAMRSTGMVVEKK 704
Query: 703 CPDRHLREKPSLE----KVTFQIGSFASPESDFESRMKKMEERV 742
PD+ + S E KVTF IG SP+SD E R + + +++
Sbjct: 705 PPDKIVPASFSCEAAQTKVTFLIGDSMSPDSDTELRSQAVVDQI 748
Score = 313 bits (801), Expect = 8e-85
Identities = 167/255 (65%), Positives = 196/255 (76%), Gaps = 11/255 (4%)
Query: 870 IPCGD---DNKKANFRTEGDIPRNESSDSALGDSDDEACASAM---LDLGHGGDRTGGSL 923
+P GD +KK TE DIPRNESSDSALGDS+ E M + +GG++ +
Sbjct: 885 VPHGDKESSDKKIAVGTEWDIPRNESSDSALGDSESEDTGHDMTRQVSSYYGGEQEDWAE 944
Query: 924 EVELPLPRSQSISTQ----NVRNFGRSLLAGYCPTYMPDLVLHGTGSDEKLKQCLVADLV 979
E E+P P S+ I N+ NFGRSLL GYC +Y+PD VL G GSDE+ +QCL++DL
Sbjct: 945 EDEIPFPGSKLIEVSAVQPNIANFGRSLLGGYCSSYVPDFVLQGIGSDERFRQCLMSDLS 1004
Query: 980 HTVHHPVLDEPIAEAVCIIADTDKWSVQVATSQRKVTDNMKLGQDVLVSSQVSSLLQSIL 1039
H V HPVLDEPIAEAVCIIAD DKW+VQVA+SQR+VTDN KLG++VLVSS VS+LL S L
Sbjct: 1005 HAVQHPVLDEPIAEAVCIIADMDKWTVQVASSQRRVTDN-KLGKEVLVSSLVSNLLHSTL 1063
Query: 1040 QLYKLHLPADFCIMHLEDRLQEMYLKSKMLSEYLRGHTRVHVKELGVVLGIESNDLPLLT 1099
QLYK +L +FC+MHLEDRLQE+Y KSKMLSEYLRG RVHVKELGVVLGIES+DLPLL
Sbjct: 1064 QLYKHNLSPNFCVMHLEDRLQELYFKSKMLSEYLRGQMRVHVKELGVVLGIESSDLPLLA 1123
Query: 1100 AIASTHSPYVAQILL 1114
A+ASTHSPYVAQILL
Sbjct: 1124 AVASTHSPYVAQILL 1138
>gi|120953291 folliculin interacting protein 1 isoform 1 [Homo
sapiens]
Length = 1166
Score = 670 bits (1729), Expect = 0.0
Identities = 404/789 (51%), Positives = 503/789 (63%), Gaps = 60/789 (7%)
Query: 1 MAPTLLQKLFNKRGSSGSSAAASAQGRAPKEGPAFSWSCSEFDLNEIRLIVYQDCDRRGR 60
MAPTL QKLF+KR G A R P G FSW EFD ++IRLIVYQDC+RRGR
Sbjct: 1 MAPTLFQKLFSKRTGLG---APGRDARDPDCG--FSWPLPEFDPSQIRLIVYQDCERRGR 55
Query: 61 QVLFDSKAVQKIEEVTAQKT-EDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHA 119
VLFDS ++ E+++ K D +K+ KCCQ SSSS S SSS
Sbjct: 56 NVLFDSSVKRRNEDISVSKLCSDAQVKVFGKCCQLKPGGDSSSSLDSSVTSSSD-----I 110
Query: 120 KEQLPKYQYTRPASDVNMLGEMMFGSVAMSYKGSTLKIHYIRSPPQLMISKVFSARMGS- 178
K+Q KYQ +R +SD NMLGEMMFGSVAMSYKGSTLKIH IRSPPQLM+SKVF+AR GS
Sbjct: 111 KDQCLKYQGSRCSSDANMLGEMMFGSVAMSYKGSTLKIHQIRSPPQLMLSKVFTARTGSS 170
Query: 179 FCGSTNNLQDSFEYINQDPNLGKLNTN------------------------QNSLGPCRT 214
CGS N LQDS E+INQD N K + N Q L R+
Sbjct: 171 ICGSLNTLQDSLEFINQDNNTLKADNNTVINGLLGNIGLSQFCSPRRAFSEQGPLRLIRS 230
Query: 215 GSNLA-HSTPVDMPSRGQNEDRDSGIARSASLSSLLITPFPSPSSSTSSS--SSYQRRWL 271
S A HS P+DMP R NEDRDSGIARSASLSSLLITPFPSP+SS + S SSYQRRW
Sbjct: 231 ASFFAVHSNPMDMPGRELNEDRDSGIARSASLSSLLITPFPSPNSSLTRSCASSYQRRWR 290
Query: 272 RSQTTSLENGIIPRRSTDETFSLAEETCSSNPAMVRRKKIAISIIFSLCEKEEAQRNFQD 331
RSQTTSLENG+ PR S +E+F+L++E+C NP +VR+KKIAI +IFSL + E+ F +
Sbjct: 291 RSQTTSLENGVFPRWSIEESFNLSDESCGPNPGIVRKKKIAIGVIFSLSKDEDENNKFNE 350
Query: 332 FFFSHFPLFESHMNRLKSAIEKAMISCRKIAESSLRVQFYVSRLMEALGEFRGTIWNLYS 391
FFFSHFPLFESHMN+LKSAIE+AM R+ A++S R Y +R+++AL EFR TI NLY+
Sbjct: 351 FFFSHFPLFESHMNKLKSAIEQAMKMSRRSADASQRSLAY-NRIVDALNEFRTTICNLYT 409
Query: 392 VPRIAEPVWLTMMSGTLEKNQLCQRFLKEFTLLIEQINKNQFFAALLTAVLTYHLAWVPT 451
+PRI EPVWLTMMSGT EKN LC RF+KEFT L+E +KNQF AL+TAVLT HLAWVPT
Sbjct: 410 MPRIGEPVWLTMMSGTPEKNHLCYRFMKEFTFLMENASKNQFLPALITAVLTNHLAWVPT 469
Query: 452 VMPVDHPPIKAFSEKRTSQSVNMLAKTHPYNPLWAQLGDLYGAIGSPVRLTRTVVVGKQK 511
VMP PPIK F EK +SQSV+MLAKTHPYNPLWAQLGDLYGAIGSPVRL RTVVVGK++
Sbjct: 470 VMPNGQPPIKIFLEKHSSQSVDMLAKTHPYNPLWAQLGDLYGAIGSPVRLARTVVVGKRQ 529
Query: 512 DLVQRILYVLTYFLRCSELQENQLTWSGNHGEGDQVLNGSKIITALEKGEVEESEYVVIT 571
D+VQR+LY LTYF+RCSELQE L +G + V+ G+ I T LEKGE+EESEYV++T
Sbjct: 530 DMVQRLLYFLTYFIRCSELQETHLLENGE--DEAIVMPGTVITTTLEKGEIEESEYVLVT 587
Query: 572 V-RNEPALVPPILPPTAAERHNPWPTGFPECPEGTDSRDLGLKPDKEANRRPEQG-SEAC 629
+ RN+ +L+ N P + ++ + D + + + G S+ C
Sbjct: 588 MHRNKSSLLFKESEEIRTPNCNCKYCSHPLLGQNVENISQQEREDIQNSSKELLGISDEC 647
Query: 630 SAGCLGPASDAS------WKPQNAFCGDEKNKEAPQDGSSRLPSCEVLGAGMKMDQQA-- 681
+ + ++ + C D K + GS + C + +G++ ++
Sbjct: 648 QMISPSDCQEENAVDVKQYRDKLRTCFDAKLETVVCTGSVPVDKCALSESGLESTEETWQ 707
Query: 682 VCELLKVEMPTRLPDRS----VAWPCPDRHLREKPSLE----KVTFQIGSFASPESDFES 733
+LL + T RS V PD+ + S E KVTF IG SP+SD E
Sbjct: 708 SEKLLDSDSHTGKAMRSTGMVVEKKPPDKIVPASFSCEAAQTKVTFLIGDSMSPDSDTEL 767
Query: 734 RMKKMEERV 742
R + + +++
Sbjct: 768 RSQAVVDQI 776
Score = 313 bits (801), Expect = 8e-85
Identities = 167/255 (65%), Positives = 196/255 (76%), Gaps = 11/255 (4%)
Query: 870 IPCGD---DNKKANFRTEGDIPRNESSDSALGDSDDEACASAM---LDLGHGGDRTGGSL 923
+P GD +KK TE DIPRNESSDSALGDS+ E M + +GG++ +
Sbjct: 913 VPHGDKESSDKKIAVGTEWDIPRNESSDSALGDSESEDTGHDMTRQVSSYYGGEQEDWAE 972
Query: 924 EVELPLPRSQSISTQ----NVRNFGRSLLAGYCPTYMPDLVLHGTGSDEKLKQCLVADLV 979
E E+P P S+ I N+ NFGRSLL GYC +Y+PD VL G GSDE+ +QCL++DL
Sbjct: 973 EDEIPFPGSKLIEVSAVQPNIANFGRSLLGGYCSSYVPDFVLQGIGSDERFRQCLMSDLS 1032
Query: 980 HTVHHPVLDEPIAEAVCIIADTDKWSVQVATSQRKVTDNMKLGQDVLVSSQVSSLLQSIL 1039
H V HPVLDEPIAEAVCIIAD DKW+VQVA+SQR+VTDN KLG++VLVSS VS+LL S L
Sbjct: 1033 HAVQHPVLDEPIAEAVCIIADMDKWTVQVASSQRRVTDN-KLGKEVLVSSLVSNLLHSTL 1091
Query: 1040 QLYKLHLPADFCIMHLEDRLQEMYLKSKMLSEYLRGHTRVHVKELGVVLGIESNDLPLLT 1099
QLYK +L +FC+MHLEDRLQE+Y KSKMLSEYLRG RVHVKELGVVLGIES+DLPLL
Sbjct: 1092 QLYKHNLSPNFCVMHLEDRLQELYFKSKMLSEYLRGQMRVHVKELGVVLGIESSDLPLLA 1151
Query: 1100 AIASTHSPYVAQILL 1114
A+ASTHSPYVAQILL
Sbjct: 1152 AVASTHSPYVAQILL 1166
>gi|8923040 CDKN2A interacting protein [Homo sapiens]
Length = 580
Score = 40.0 bits (92), Expect = 0.012
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 33/254 (12%)
Query: 94 GSSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTRPASDVNMLGEMMFGSVAMSYKGS 153
G SVSS SSSS+SS ++ GS ++ + P + AS V++L S
Sbjct: 206 GDRSVSSQSSSSVSSQVTTAGSGKASEAEAPDKHGS--ASFVSLL-------------KS 250
Query: 154 TLKIHYIRSPPQLMISKVFSARMGSFCGSTNNLQDSFEYINQDPNLGKLNTNQNSLGPCR 213
++ H +S S S + + GS+ + S I + P LG +++ L P
Sbjct: 251 SVNSHMTQSTDSRQQSG--SPKKSALEGSSASASQSSSEI-EVPLLGSSGSSEVEL-PLL 306
Query: 214 TGSNLAHSTPVDMPSRGQNE-DRDSGIARSASLS-SLLITPFPSPSSSTS-----SSSSY 266
+ + + + S+ +E S +A+++S S + L+TP S S++TS S+S
Sbjct: 307 SSKPSSETASSGLTSKTSSEASVSSSVAKNSSSSGTSLLTPKSSSSTNTSLLTSKSTSQV 366
Query: 267 QRRWLRSQTTSLENGIIPRRSTD-------ETFSLAEETCSSNPAMVRRKKIAISIIFSL 319
L S+++S +G + +ST + S ++ + S P+ + S+ FS
Sbjct: 367 AASLLASKSSSQTSGSLVSKSTSLASVSQLASKSSSQTSTSQLPSKSTSQSSESSVKFSC 426
Query: 320 CEKEEAQRNFQDFF 333
E + Q FF
Sbjct: 427 KLTNEDVKQKQPFF 440
>gi|67782356 corneodesmosin precursor [Homo sapiens]
Length = 529
Score = 37.0 bits (84), Expect = 0.10
Identities = 46/148 (31%), Positives = 62/148 (41%), Gaps = 14/148 (9%)
Query: 95 SSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTRPASDVNMLGEMMFGSVAMSYKGST 154
S S SSSS SSISS SSGG S + Q S G + V+ S GS
Sbjct: 67 SYSGSSSSGSSISSARSSGGGSSGSSSGSSIAQGGSAGSFKPGTG---YSQVSYS-SGSG 122
Query: 155 LKIHYIRSPPQLMISKVFSARMGSFCGST---NNLQDSFEYINQDPNLGK---LNTNQNS 208
+ QL S S GS GS+ ++ SF++ + +G L TN NS
Sbjct: 123 SSLQGASGSSQLGSSSSHSGSSGSHSGSSSSHSSSSSSFQFSSSSFQVGNGSALPTNDNS 182
Query: 209 ----LGPCRTGSNLAHSTPVDMPSRGQN 232
L P + G + + S + S GQ+
Sbjct: 183 YRGILNPSQPGQSSSSSQTFGVSSSGQS 210
>gi|102468717 mediator complex subunit 13 [Homo sapiens]
Length = 2174
Score = 36.6 bits (83), Expect = 0.14
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 241 RSASLSSLLITPFPSPSSSTSSSSSYQRRWLR---------SQTTSLENGIIPRRSTDET 291
R ++SS+ +TP SP + ++W++ S +TS G IPR+ +
Sbjct: 316 RDPAMSSVTLTPPTSPEEVQTVDPQSVQKWVKFSSVSDGFNSDSTSHHGGKIPRKLANHV 375
Query: 292 FSLAEETCSSNPAMVRRKKIAISIIFSLCEKEEAQR 327
+ C+ N A +RK A S LCE+ A +
Sbjct: 376 VDRVWQECNMNRAQNKRKYSASS--GGLCEEATAAK 409
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 35.8 bits (81), Expect = 0.23
Identities = 53/195 (27%), Positives = 75/195 (38%), Gaps = 30/195 (15%)
Query: 95 SSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTRPASDVNMLGEMMFGSVAMSYKGST 154
S SVSSS S S SHSSS SS ++ + S + L M+ S S GS+
Sbjct: 1086 SGSVSSSGSKSHHSHSSSSSSSASTSGKMKSSK--SEGSSSSKLSSSMYSSQGSS--GSS 1141
Query: 155 LKIHYIRSPPQLMISKVFSARMGSFCGSTNNLQDSFEYINQDPNLGKLNTNQNSLGPCRT 214
+ +S + S + + S ST +P+L K N + + P
Sbjct: 1142 QSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSKPNISPSHSRPPGG 1201
Query: 215 GSNLAH--------------STPVDMPSRGQNED---------RDSGIARSASLSSLLIT 251
LA +P+ S G + SG+ S SLS T
Sbjct: 1202 SDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLGSSGSLSQK--T 1259
Query: 252 PFPSPSSSTSSSSSY 266
P PS +S T+SSSS+
Sbjct: 1260 P-PSSNSCTASSSSF 1273
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 35.4 bits (80), Expect = 0.30
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 825 GAGGTGGRRLEATRGLYVKAAEGPVLEPVAPRCVQRGPG-LVAGANIPCGDDNKKANFRT 883
G GG GG R RG + A G APR +R PG AGA+ P DD+ +
Sbjct: 42 GGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAGASAPVEDDSDAETYGE 101
Query: 884 EGDIPRNESSDSALGDSD 901
E D N S + + D
Sbjct: 102 ENDEQGNYSKRKIVSNWD 119
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 35.4 bits (80), Expect = 0.30
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 200 GKLNTNQNSLGPCRTGSN--LAHSTPVDMPSRGQNEDRDSGIARSASLSSLLITPFPSPS 257
G+ ++N G C TG A S+ P+ + S + S+S SS + S S
Sbjct: 2583 GEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2642
Query: 258 SSTSSSSSYQRRWLRSQTTSLENGIIPRRSTDETFSLAEETCSSN 302
SS+SSSSS S ++S + +TDE + +CSS+
Sbjct: 2643 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDE-----DSSCSSD 2682
Score = 32.3 bits (72), Expect = 2.6
Identities = 35/104 (33%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 14 GSSGSSAAASAQGRAPKEGPAFSWSCSEFDLNEIRLIVYQDCDRRGRQV-LFDSKAVQKI 72
GSS SS+++S+ G + EG E D N C GR S+A
Sbjct: 2566 GSSSSSSSSSSSG-SETEGE------EEGDKNGDG-----GCGTGGRNCSAASSRAASPA 2613
Query: 73 EEVTAQKTEDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSS 116
++ + S+ SSS SSSSSSS SS SSS SS
Sbjct: 2614 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2657
Score = 30.4 bits (67), Expect = 9.8
Identities = 17/28 (60%), Positives = 19/28 (67%)
Query: 95 SSSVSSSSSSSISSHSSSGGSSHHAKEQ 122
SSS SSS SSS SS SSS GS +E+
Sbjct: 2559 SSSSSSSGSSSSSSSSSSSGSETEGEEE 2586
Score = 30.4 bits (67), Expect = 9.8
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 88 SAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQ 122
S+ SSS SSSSSSS SS SSS SS ++
Sbjct: 2641 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDE 2675
>gi|120953251 neuron navigator 3 [Homo sapiens]
Length = 2363
Score = 35.4 bits (80), Expect = 0.30
Identities = 51/240 (21%), Positives = 88/240 (36%), Gaps = 13/240 (5%)
Query: 61 QVLFDSKAVQKIEEVTAQKTEDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAK 120
+ FDS ++ T P ++ + Q + + + S+ + G+S
Sbjct: 714 ETTFDSTVTTEVNGRTIPNLTSRPTPMTWRLGQACPRLQAGDAPSLGAGYPRSGTSRFIH 773
Query: 121 EQLPKYQYTRP--ASDVNMLGEMMFGSVAMSYKGSTLKIHYIRSPPQLMISKVFSARMGS 178
++ YT P + V+ LG M + MS K S+ + ++ + S G
Sbjct: 774 TDPSRFMYTTPLRRAAVSRLGNM--SQIDMSEKASS----DLDMSSEVDVGGYMSD--GD 825
Query: 179 FCGSTNNLQDSFEYINQDPNLGKLNTNQNSLGPCRTGSNLAHSTPVDMPSRGQNEDRDSG 238
G + D D L + N + T ++ D+ + D S
Sbjct: 826 ILGKSLRTDDINSGYMTDGGLNLYTRSLNRIPDTATSRDIIQRGVHDVTVDADSWDDSSS 885
Query: 239 IARSASLSSLLITPFPSPSSSTSSSSSYQRRWLRS-QTTSLENGIIPRRSTDETFSLAEE 297
+ S+ LS L ++TSS SSY + S + T L R +TDET+ EE
Sbjct: 886 V--SSGLSDTLDNISTDDLNTTSSVSSYSNITVPSRKNTQLRTDSEKRSTTDETWDSPEE 943
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 35.4 bits (80), Expect = 0.30
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 6 LQKLFNKRGSSGSSAAASAQGRAPKEGPAFSWSCSEFDLNEIRLIVYQDCDRRGRQVLFD 65
LQ +R SS SS+++S+ + + S S S +E + Q R
Sbjct: 2524 LQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPT 2583
Query: 66 SKAVQKIEEVTAQKTEDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSS 116
+ + E + E P K + SSS SSSSSSS SS SSS SS
Sbjct: 2584 PAPKEAVRE--GRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSS 2632
Score = 31.6 bits (70), Expect = 4.4
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 95 SSSVSSSSSSSISSHSSSGGSSHHAKE 121
SSS SSSSSSS SS SSS GSS E
Sbjct: 2538 SSSSSSSSSSSSSSSSSSSGSSSSDSE 2564
Score = 31.6 bits (70), Expect = 4.4
Identities = 19/37 (51%), Positives = 21/37 (56%)
Query: 88 SAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQLP 124
S+ SSS SSSSSSS SS SSS SS + P
Sbjct: 2613 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSP 2649
Score = 31.6 bits (70), Expect = 4.4
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 88 SAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTRPAS 133
S+ SSS SSSSSSS SS SSS SS + + +PAS
Sbjct: 2619 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPAS 2664
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 34.7 bits (78), Expect = 0.52
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 88 SAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTRPASD 134
S+ SSS SSSSSSS SS SSS +S +L K +P+ D
Sbjct: 164 SSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKD 210
Score = 32.7 bits (73), Expect = 2.0
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 88 SAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTRP 131
S+ SSS SSSSSSS SS SSS SS + +++P
Sbjct: 153 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKP 196
Score = 30.8 bits (68), Expect = 7.5
Identities = 19/32 (59%), Positives = 20/32 (62%)
Query: 85 IKISAKCCQGSSSVSSSSSSSISSHSSSGGSS 116
I S+ SSS SSSSSSS SS SSS SS
Sbjct: 146 IHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 177
Score = 30.4 bits (67), Expect = 9.8
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 70 QKIEEVTAQKTEDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSS 116
+K+ + + S+ SSS SSSSSSS SS SSS SS
Sbjct: 133 RKLLKAGGDPNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 179
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 34.3 bits (77), Expect = 0.68
Identities = 22/39 (56%), Positives = 24/39 (61%)
Query: 86 KISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQLP 124
K A+ SSS SSSSSSS SS SSS SS AK+ P
Sbjct: 86 KPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDP 124
Score = 30.8 bits (68), Expect = 7.5
Identities = 19/30 (63%), Positives = 19/30 (63%)
Query: 95 SSSVSSSSSSSISSHSSSGGSSHHAKEQLP 124
SSS SSSSSSS SS SSS SS K P
Sbjct: 96 SSSSSSSSSSSSSSSSSSSSSSQAKKPDPP 125
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 34.3 bits (77), Expect = 0.68
Identities = 22/39 (56%), Positives = 24/39 (61%)
Query: 86 KISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQLP 124
K A+ SSS SSSSSSS SS SSS SS AK+ P
Sbjct: 86 KPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDP 124
Score = 30.8 bits (68), Expect = 7.5
Identities = 19/30 (63%), Positives = 19/30 (63%)
Query: 95 SSSVSSSSSSSISSHSSSGGSSHHAKEQLP 124
SSS SSSSSSS SS SSS SS K P
Sbjct: 96 SSSSSSSSSSSSSSSSSSSSSSQAKKPDPP 125
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 34.3 bits (77), Expect = 0.68
Identities = 78/391 (19%), Positives = 136/391 (34%), Gaps = 30/391 (7%)
Query: 543 EGDQVLNGSKIITALEKGEVEESEYVVITVRNEPALVPPILPPTAAERHNPWPTGFPECP 602
E + + N + + E+ + + E+V+I E PP P+ + + P P
Sbjct: 519 EQEALSNAFRSVPLAEEEDFDSKEWVIIDKETELKDFPPGAEPSTSGTTDEEPEELRPLP 578
Query: 603 -EGTDSRDLGLKPDKEANRRPEQGSEACSAGCLGPASDASWKPQNAFCGDEKNKEAPQDG 661
EG + R LG +P R Q L P P GD ++ E Q
Sbjct: 579 EEGEERRRLGAEPTVRPRGRSMQALAEEDLQHLPPQP----LPPQLSQGDGRS-ETSQPP 633
Query: 662 SSRLPSCEVLGAGMKMDQQAVCELLKVEMPTRLPDRSVAWPCPDRHLREKPSLEKVTFQI 721
+ PS L +G + ++ E P R V P + P ++
Sbjct: 634 TPGSPSHSPLHSGPRPRRR--------ESDPTGPQRQVFSVAPPFEVNGLPRAVPLSLPY 685
Query: 722 GSFASPESDFESRMKKMEERVKACGPSLEASEAADVAQDPQVSRSPFKP---GFQENVCC 778
F SD+ R + + RV+ G S + PQV +P +P G +E
Sbjct: 686 QDFKRDLSDYRERARLL-NRVRRVGFS------HMLLTTPQVPLAPVQPQANGKEEE--- 735
Query: 779 PQNRLSEGDEGESDKGFAEDRGSRNDMAADIAGQLSHAADLGTASHGAGGTGGRRLEATR 838
+ + +E E D+ E+ + + + AA G G E +
Sbjct: 736 -EEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSSEGSE 794
Query: 839 GLYVKAAEG-PVLEPVAPRCVQRGPGLVAGANIPCGDDNKKANFRTEGDIPRNESSDSAL 897
++ EG P + RG +A ++ + +K + GD+ ++ + + L
Sbjct: 795 RSTDRSQEGAPSTLLADDQKESRGRASMADGDLEPEEGSKTLVLVSPGDMKKSPVT-AEL 853
Query: 898 GDSDDEACASAMLDLGHGGDRTGGSLEVELP 928
D +A+ TG L+V P
Sbjct: 854 APDPDLGTLAALTPQHERPQPTGSQLDVSEP 884
>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
Length = 360
Score = 34.3 bits (77), Expect = 0.68
Identities = 23/51 (45%), Positives = 28/51 (54%)
Query: 80 TEDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTR 130
TE K + SSS SSSSSSS SS SSS SS +++ KY+ R
Sbjct: 184 TERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKR 234
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 34.3 bits (77), Expect = 0.68
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 88 SAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYT 129
S+ C SSS SSS+SSS SS SSS S +E+ K + T
Sbjct: 2168 SSSCSSASSSSSSSTSSSSSSSSSSSEESDSDEEEAQKREST 2209
Score = 30.8 bits (68), Expect = 7.5
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 88 SAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQ 122
S SSS SS+SSSS SS SSS SS + E+
Sbjct: 2161 SGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEE 2195
Score = 30.4 bits (67), Expect = 9.8
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 57 RRGRQVLFDSKAVQKIEEVTAQKTEDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSS 116
+RG + DS + + +++ + + GSSS SSSS SS SS SSS SS
Sbjct: 2125 KRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSS 2184
Score = 30.4 bits (67), Expect = 9.8
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 88 SAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQ 122
S+ C +SS SSSS+SS SS SSS + E+
Sbjct: 2167 SSSSCSSASSSSSSSTSSSSSSSSSSSEESDSDEE 2201
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 33.9 bits (76), Expect = 0.88
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 832 RRLEATRGLYVKAAEGPV-LEPVAPRCVQR-----GPGLVAGANIPCGDDNKKANFRTEG 885
+R E T G + A G +P + R VQ GPGL G + G+D EG
Sbjct: 1696 KRGEHTDGEAAEVAPGKTHTDPTSTRTVQGAEGGLGPGLSQGPGVDEGEDG-------EG 1748
Query: 886 DIPRNESSDSALGDSDDEACASAMLDLGHGGDRTGGS 922
N D LG+++ +A A H + + GS
Sbjct: 1749 SQRLNRDKDPKLGEAEGDAMAQEREGKTHNSETSAGS 1785
>gi|23397642 GREB1 protein isoform a [Homo sapiens]
Length = 1949
Score = 33.5 bits (75), Expect = 1.2
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 584 PPTAAERHNPWPTGFPECPEGTDSRDLGLKPDKEANRRPEQGSEACSAGCLGPASDASWK 643
PP+A RH+P PT P+C T R + + ++ S S+ + PA+ +W
Sbjct: 1185 PPSAISRHSPGPTPQPDCSLRTGQRSVQVSVTSSCSQL--SSSSGSSSSSVAPAA-GTWV 1241
Query: 644 PQNAFCGDEKNKEAP 658
Q + C K P
Sbjct: 1242 LQASQCSLTKACRQP 1256
>gi|171906569 seipin isoform 1 [Homo sapiens]
Length = 462
Score = 33.5 bits (75), Expect = 1.2
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 599 PECPEGTDSRDLGLKPDKEANRRPEQGSEACSAGCLGPASDASWKPQNAFCGDEKNKEAP 658
PE P GT+ + L +++ +++P G E ASD S ++A E N AP
Sbjct: 378 PEDPSGTEGQ---LSEEEKPDQQPLSGEEELEP----EASDGSGSWEDAALLTEANLPAP 430
Query: 659 QDGSSRLPSCEVLG----AGMKMDQQAVC 683
S+ P E LG AG + Q+ C
Sbjct: 431 APASASAPVLETLGSSEPAGGALRQRPTC 459
>gi|195230753 seipin isoform 1 [Homo sapiens]
Length = 462
Score = 33.5 bits (75), Expect = 1.2
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 599 PECPEGTDSRDLGLKPDKEANRRPEQGSEACSAGCLGPASDASWKPQNAFCGDEKNKEAP 658
PE P GT+ + L +++ +++P G E ASD S ++A E N AP
Sbjct: 378 PEDPSGTEGQ---LSEEEKPDQQPLSGEEELEP----EASDGSGSWEDAALLTEANLPAP 430
Query: 659 QDGSSRLPSCEVLG----AGMKMDQQAVC 683
S+ P E LG AG + Q+ C
Sbjct: 431 APASASAPVLETLGSSEPAGGALRQRPTC 459
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 33.5 bits (75), Expect = 1.2
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 95 SSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTRP 131
SSS SS+++SS SS SSS S A + LP Y ++ P
Sbjct: 377 SSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFP 413
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 33.5 bits (75), Expect = 1.2
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 95 SSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTRP 131
SSS SS+++SS SS SSS S A + LP Y ++ P
Sbjct: 377 SSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFP 413
>gi|40068505 seipin isoform 2 [Homo sapiens]
Length = 398
Score = 33.5 bits (75), Expect = 1.2
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 599 PECPEGTDSRDLGLKPDKEANRRPEQGSEACSAGCLGPASDASWKPQNAFCGDEKNKEAP 658
PE P GT+ + L +++ +++P G E ASD S ++A E N AP
Sbjct: 314 PEDPSGTEGQ---LSEEEKPDQQPLSGEEELEP----EASDGSGSWEDAALLTEANLPAP 366
Query: 659 QDGSSRLPSCEVLG----AGMKMDQQAVC 683
S+ P E LG AG + Q+ C
Sbjct: 367 APASASAPVLETLGSSEPAGGALRQRPTC 395
>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
Length = 338
Score = 33.5 bits (75), Expect = 1.2
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 95 SSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTR 130
SSS SSSSSSS SS SSS SS +++ KY+ R
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKR 215
>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
Length = 352
Score = 33.5 bits (75), Expect = 1.2
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 95 SSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTR 130
SSS SSSSSSS SS SSS SS +++ KY+ R
Sbjct: 191 SSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKR 226
>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
Length = 341
Score = 33.5 bits (75), Expect = 1.2
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 95 SSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTR 130
SSS SSSSSSS SS SSS SS +++ KY+ R
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKR 215
>gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]
Length = 858
Score = 33.5 bits (75), Expect = 1.2
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 82 DVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTRPASDVNMLGEM 141
++P+ ++ +SS S +SSSS ++SSSGGS Q+ Y V ++ +
Sbjct: 4 ELPVPHTSSSACATSSTSGASSSSGCNNSSSGGSGRPTGPQISVYSGIPDRQTVQVIQQA 63
Query: 142 MF--GSVAMSY---KGSTLKIHYIRSPPQLMISKVFSARMGSFCGSTNNLQDSFEYINQD 196
+ S A Y + + H + L + SA++ S +Q + N+
Sbjct: 64 LHRQPSTAAQYLQQMYAAQQQHLMLQTAALQQQHLSSAQLQSLAA----VQQASLVSNRQ 119
Query: 197 PNLGKLNTNQNSLGPCRTGS-NLAHS-TPVDMPSRGQ--NEDRDSGIARSASLSSLLITP 252
+ +N ++ P ++ S NLA S + +R Q N SGIA+ A +L+
Sbjct: 120 GSTS--GSNVSAQAPAQSSSINLAASPAAAQLLNRAQSVNSAAASGIAQQA----VLLGN 173
Query: 253 FPSPSSSTSSSSSYQR 268
SP+ + S + Y R
Sbjct: 174 TSSPALTASQAQMYLR 189
>gi|4505379 nuclear factor erythroid 2-like 1 [Homo sapiens]
Length = 772
Score = 33.1 bits (74), Expect = 1.5
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 223 PVDMPSRGQNEDRDSGIARSASLSSLLITPFPSPSSSTSSSSSYQRRWLRSQTTSL-ENG 281
PV + D DSG++ +S S ++ SSS+SSSSS S ++S E G
Sbjct: 463 PVQASQLEEEFDSDSGLSLDSSHSPSSLSSSEGSSSSSSSSSSSSSSASSSASSSFSEEG 522
Query: 282 IIPRRSTDETFSLAE 296
+ S ET L E
Sbjct: 523 AVGYSSDSETLDLEE 537
Score = 32.0 bits (71), Expect = 3.4
Identities = 19/29 (65%), Positives = 20/29 (68%)
Query: 88 SAKCCQGSSSVSSSSSSSISSHSSSGGSS 116
S +GSSS SSSSSSS SS SSS SS
Sbjct: 489 SLSSSEGSSSSSSSSSSSSSSASSSASSS 517
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 33.1 bits (74), Expect = 1.5
Identities = 57/261 (21%), Positives = 96/261 (36%), Gaps = 19/261 (7%)
Query: 76 TAQKTEDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTRPASDV 135
++Q + P++ Q S S S S+ G + Q+P+ P
Sbjct: 647 SSQSPPEGPVQSPLHSPQSPPEGMHSQSPLQSPESAPEGEDSLSPLQIPQ----SPLEGE 702
Query: 136 NMLGEMMFGSVAMSYKGSTLKIHYIRSPPQLMISKVFSARMGSFCGSTNNLQ--DSFEYI 193
+ L + F ++ S +H+ + PPQ + S C S+ +L SF
Sbjct: 703 DSLSSLHFPQSPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSICSSSTSLSLPQSFPES 762
Query: 194 NQDPNLGKLNTNQN---------SLGPCRTGSNLAHSTPVDMPSRGQNEDRDSGIARSAS 244
Q P G + +L S+ + +P + P++ + S S S
Sbjct: 763 PQSPPEGPAQSPLQRPVSSFFSYTLASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTS 822
Query: 245 LSSLLITPFPSPSSSTSS--SSSYQRRWLRSQTTSLENGIIPRRSTDETFSLAEETCSSN 302
S +P S SSTSS S S L+S S + ++E+ S +E SS+
Sbjct: 823 SSLSQSSPVSSFPSSTSSSLSKSSPESPLQSPVISFSSSTSLSPFSEESSSPVDEYTSSS 882
Query: 303 PAMVRRKKIAISIIFSLCEKE 323
++ + S SL E E
Sbjct: 883 DTLLESDSLTDS--ESLIESE 901
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,371,413
Number of Sequences: 37866
Number of extensions: 2144883
Number of successful extensions: 10434
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 9201
Number of HSP's gapped (non-prelim): 752
length of query: 1114
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1001
effective length of database: 13,968,660
effective search space: 13982628660
effective search space used: 13982628660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.