Search of human proteins with 154426264

Search of human proteins with 154426264

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|154426264 ubiquitin protein ligase E3 component n-recognin 7
(putative) isoform 3 [Homo sapiens]
         (349 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|154426264 ubiquitin protein ligase E3 component n-recognin 7 ...   728   0.0  
gi|154426322 ubiquitin protein ligase E3 component n-recognin 7 ...   694   0.0  
gi|38788260 bromodomain PHD finger transcription factor isoform ...    47   2e-05
gi|38788274 bromodomain PHD finger transcription factor isoform ...    47   2e-05
gi|117190342 PHD finger protein 2 [Homo sapiens]                       47   3e-05
gi|32698700 PHD finger protein 8 [Homo sapiens]                        45   1e-04
gi|90093355 jumonji C domain containing histone demethylase 1 ho...    45   1e-04
gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]       37   0.020
gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]       37   0.020
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]       35   0.077
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]       35   0.077
gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]       35   0.077
gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]       35   0.077
gi|6678764 metal response element binding transcription factor 2...    33   0.38 
gi|4506221 proteasome 26S non-ATPase subunit 12 isoform 1 [Homo ...    33   0.50 
gi|28872765 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo...    33   0.50 
gi|31541941 heat shock 70kDa protein 4-like [Homo sapiens]             32   0.65 
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa...    32   0.65 
gi|9625002 integrin, beta 6 [Homo sapiens]                             32   0.85 
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    32   0.85 
gi|118421089 chromodomain helicase DNA binding protein 2 isoform...    32   0.85 
gi|110611184 chromodomain helicase DNA binding protein 2 isoform...    32   0.85 
gi|61743952 1-acylglycerol-3-phosphate O-acyltransferase 5 [Homo...    31   1.4  
gi|11034855 TMEM9 domain family, member B [Homo sapiens]               31   1.4  
gi|118498356 kinectin 1 isoform a [Homo sapiens]                       31   1.9  
gi|118498368 kinectin 1 isoform c [Homo sapiens]                       31   1.9  
gi|33620775 kinectin 1 isoform a [Homo sapiens]                        31   1.9  
gi|194306543 oxidation resistance 1 isoform 2 [Homo sapiens]           31   1.9  
gi|194306541 oxidation resistance 1 isoform 1 [Homo sapiens]           31   1.9  
gi|117553613 coiled-coil domain containing 151 [Homo sapiens]          31   1.9  

>gi|154426264 ubiquitin protein ligase E3 component n-recognin 7
           (putative) isoform 3 [Homo sapiens]
          Length = 349

 Score =  728 bits (1880), Expect = 0.0
 Identities = 349/349 (100%), Positives = 349/349 (100%)

Query: 1   MRRALSWAAATPRSAPTLRNFRCDCGNSKFKNLECKLLPDKAKVNSGNKYNDNFFGLYCI 60
           MRRALSWAAATPRSAPTLRNFRCDCGNSKFKNLECKLLPDKAKVNSGNKYNDNFFGLYCI
Sbjct: 1   MRRALSWAAATPRSAPTLRNFRCDCGNSKFKNLECKLLPDKAKVNSGNKYNDNFFGLYCI 60

Query: 61  CKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKRCSFLWAYA 120
           CKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKRCSFLWAYA
Sbjct: 61  CKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKRCSFLWAYA 120

Query: 121 AQLAVTKISTEDDGLVRNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQN 180
           AQLAVTKISTEDDGLVRNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQN
Sbjct: 121 AQLAVTKISTEDDGLVRNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQN 180

Query: 181 SEPCAGSSSESDLQTVFKNESLNAESKSGCKLQELKAKQLIKKDTATYWPLNWRSKLCTC 240
           SEPCAGSSSESDLQTVFKNESLNAESKSGCKLQELKAKQLIKKDTATYWPLNWRSKLCTC
Sbjct: 181 SEPCAGSSSESDLQTVFKNESLNAESKSGCKLQELKAKQLIKKDTATYWPLNWRSKLCTC 240

Query: 241 QDCMKMYGDLDVLFLTDEYDTVLAYENKGKIAQATDRSDPLMDTLSSMNRVQQVELICEY 300
           QDCMKMYGDLDVLFLTDEYDTVLAYENKGKIAQATDRSDPLMDTLSSMNRVQQVELICEY
Sbjct: 241 QDCMKMYGDLDVLFLTDEYDTVLAYENKGKIAQATDRSDPLMDTLSSMNRVQQVELICEY 300

Query: 301 NDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDGMQYYCS 349
           NDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDGMQYYCS
Sbjct: 301 NDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDGMQYYCS 349


>gi|154426322 ubiquitin protein ligase E3 component n-recognin 7
           (putative) isoform 2 [Homo sapiens]
          Length = 425

 Score =  694 bits (1792), Expect = 0.0
 Identities = 332/333 (99%), Positives = 332/333 (99%)

Query: 17  TLRNFRCDCGNSKFKNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPYPDPEDEIPDEM 76
           T RNFRCDCGNSKFKNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPYPDPEDEIPDEM
Sbjct: 93  TKRNFRCDCGNSKFKNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPYPDPEDEIPDEM 152

Query: 77  IQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKRCSFLWAYAAQLAVTKISTEDDGLV 136
           IQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKRCSFLWAYAAQLAVTKISTEDDGLV
Sbjct: 153 IQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKRCSFLWAYAAQLAVTKISTEDDGLV 212

Query: 137 RNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQNSEPCAGSSSESDLQTV 196
           RNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQNSEPCAGSSSESDLQTV
Sbjct: 213 RNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQNSEPCAGSSSESDLQTV 272

Query: 197 FKNESLNAESKSGCKLQELKAKQLIKKDTATYWPLNWRSKLCTCQDCMKMYGDLDVLFLT 256
           FKNESLNAESKSGCKLQELKAKQLIKKDTATYWPLNWRSKLCTCQDCMKMYGDLDVLFLT
Sbjct: 273 FKNESLNAESKSGCKLQELKAKQLIKKDTATYWPLNWRSKLCTCQDCMKMYGDLDVLFLT 332

Query: 257 DEYDTVLAYENKGKIAQATDRSDPLMDTLSSMNRVQQVELICEYNDLKTELKDYLKRFAD 316
           DEYDTVLAYENKGKIAQATDRSDPLMDTLSSMNRVQQVELICEYNDLKTELKDYLKRFAD
Sbjct: 333 DEYDTVLAYENKGKIAQATDRSDPLMDTLSSMNRVQQVELICEYNDLKTELKDYLKRFAD 392

Query: 317 EGTVVKREDIQQFFEEFQSKKRRRVDGMQYYCS 349
           EGTVVKREDIQQFFEEFQSKKRRRVDGMQYYCS
Sbjct: 393 EGTVVKREDIQQFFEEFQSKKRRRVDGMQYYCS 425


>gi|38788260 bromodomain PHD finger transcription factor isoform 2
            [Homo sapiens]
          Length = 2903

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 41   KAKVNSGNKYNDNFFGLYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGD 100
            K  +++ +K       LYCICK PY + +       I C  C++W+HGR +G +  E+  
Sbjct: 2709 KKMISTTSKETKKDTKLYCICKTPYDESKF-----YIGCDRCQNWYHGRCVGILQSEAEL 2763

Query: 101  FQEMVCQAC 109
              E VC  C
Sbjct: 2764 IDEYVCPQC 2772


>gi|38788274 bromodomain PHD finger transcription factor isoform 1
            [Homo sapiens]
          Length = 2920

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 41   KAKVNSGNKYNDNFFGLYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGD 100
            K  +++ +K       LYCICK PY + +       I C  C++W+HGR +G +  E+  
Sbjct: 2726 KKMISTTSKETKKDTKLYCICKTPYDESKF-----YIGCDRCQNWYHGRCVGILQSEAEL 2780

Query: 101  FQEMVCQAC 109
              E VC  C
Sbjct: 2781 IDEYVCPQC 2789



 Score = 29.3 bits (64), Expect = 5.5
 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 18/101 (17%)

Query: 127 KISTEDDG--LVRNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQNS--- 181
           K  TE+D     +N +   DQ + K       D    +D PEQGK +V + K E+++   
Sbjct: 580 KNETENDSKDAEKNREEFEDQSLEKDS-----DDKTPDDDPEQGKSEVGDFKSEKSNGEL 634

Query: 182 --EPCAGSSSESDLQTVFKNESLNAESKSGCKLQELKAKQL 220
              P AG  +    + + +  + ++      KL +LK++Q+
Sbjct: 635 SESPGAGKGASGSTRIITRLRNPDS------KLSQLKSQQV 669


>gi|117190342 PHD finger protein 2 [Homo sapiens]
          Length = 1096

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 57  LYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMK 111
           +YC+C+ PY     ++   MI+C  C+DWFHG  +G    E+ D     C  C K
Sbjct: 6   VYCVCRLPY-----DVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEK 55


>gi|32698700 PHD finger protein 8 [Homo sapiens]
          Length = 1024

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)

Query: 57  LYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQAC 109
           +YC+C+ PY     ++   MI+C +C+DWFHG  +G    ++ D     C  C
Sbjct: 6   VYCLCRLPY-----DVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 53


>gi|90093355 jumonji C domain containing histone demethylase 1
           homolog D [Homo sapiens]
          Length = 941

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)

Query: 57  LYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQAC 109
           +YC+C++PY     ++   MI+C +C+DWFHG  +G     + D     C  C
Sbjct: 38  VYCVCRQPY-----DVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNC 85


>gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]
          Length = 660

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 57  LYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKR 112
           +YCIC++P      +I   MI C  C +WFHG  +      +   +E  C+ C ++
Sbjct: 27  IYCICRKP------DINCFMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREK 76


>gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]
          Length = 656

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 57  LYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKR 112
           +YCIC++P      +I   MI C  C +WFHG  +      +   +E  C+ C ++
Sbjct: 27  IYCICRKP------DINCFMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREK 76


>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
          Length = 2240

 Score = 35.4 bits (80), Expect = 0.077
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 6/36 (16%)

Query: 57  LYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLG 92
           LYCIC++P+ +        MI C  CE+WFHG  +G
Sbjct: 269 LYCICRQPHNNRF------MICCDRCEEWFHGDCVG 298



 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/44 (34%), Positives = 26/44 (59%)

Query: 162  EDVPEQGKDDVREVKVEQNSEPCAGSSSESDLQTVFKNESLNAE 205
            +D+P +   DVR   VE+ +EP AG+++ S ++     E LN +
Sbjct: 1442 DDLPNRMCADVRRNSVERPAEPVAGAATPSLVEQQKMLEELNKQ 1485


>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
          Length = 1189

 Score = 35.4 bits (80), Expect = 0.077
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 6/36 (16%)

Query: 57  LYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLG 92
           LYCIC++P+ +        MI C  CE+WFHG  +G
Sbjct: 269 LYCICRQPHNNRF------MICCDRCEEWFHGDCVG 298


>gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]
          Length = 562

 Score = 35.4 bits (80), Expect = 0.077
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 6/36 (16%)

Query: 57  LYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLG 92
           LYCIC++P+ +        MI C  CE+WFHG  +G
Sbjct: 269 LYCICRQPHNNRF------MICCDRCEEWFHGDCVG 298


>gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]
          Length = 562

 Score = 35.4 bits (80), Expect = 0.077
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 6/36 (16%)

Query: 57  LYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLG 92
           LYCIC++P+ +        MI C  CE+WFHG  +G
Sbjct: 269 LYCICRQPHNNRF------MICCDRCEEWFHGDCVG 298


>gi|6678764 metal response element binding transcription factor 2
           [Homo sapiens]
          Length = 593

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 14/81 (17%)

Query: 58  YCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAI--PPESGD-FQEMVCQAC----- 109
           YC C  P      +   +M+QC  C+ WFH   +  +  P   GD F   +C  C     
Sbjct: 203 YCYCGGP-----GDWYLKMLQCCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVCSSGPE 257

Query: 110 -MKRCSFLWAYAAQLAVTKIS 129
            +KR    W   A L +  +S
Sbjct: 258 YLKRLPLQWVDIAHLCLYNLS 278


>gi|4506221 proteasome 26S non-ATPase subunit 12 isoform 1 [Homo
           sapiens]
          Length = 456

 Score = 32.7 bits (73), Expect = 0.50
 Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)

Query: 245 KMYGDLDVLFLTDEYDTVLAYENKGKIAQATDRSDPL-MDTLSSMNRVQQVELICEYNDL 303
           K+Y +++   LT    T+   E  G + +A      L ++T  SM + ++VE I E   L
Sbjct: 135 KIYVEIERARLTKTLATIK--EQNGDVKEAASILQELQVETYGSMEKKERVEFILEQMRL 192

Query: 304 KTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDGMQYY 347
              +KDY++       ++ ++   +FF+E  ++K +    ++YY
Sbjct: 193 CLAVKDYIRT-----QIISKKINTKFFQEENTEKLK----LKYY 227


>gi|28872765 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo
           sapiens]
          Length = 436

 Score = 32.7 bits (73), Expect = 0.50
 Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)

Query: 245 KMYGDLDVLFLTDEYDTVLAYENKGKIAQATDRSDPL-MDTLSSMNRVQQVELICEYNDL 303
           K+Y +++   LT    T+   E  G + +A      L ++T  SM + ++VE I E   L
Sbjct: 115 KIYVEIERARLTKTLATIK--EQNGDVKEAASILQELQVETYGSMEKKERVEFILEQMRL 172

Query: 304 KTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDGMQYY 347
              +KDY++       ++ ++   +FF+E  ++K +    ++YY
Sbjct: 173 CLAVKDYIRT-----QIISKKINTKFFQEENTEKLK----LKYY 207


>gi|31541941 heat shock 70kDa protein 4-like [Homo sapiens]
          Length = 839

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 41/197 (20%), Positives = 80/197 (40%), Gaps = 50/197 (25%)

Query: 136 VRNIDGIGDQEVIKPEN--GEHQDSTLKEDVP--EQGKDDVREVKVEQNS--EPCAGSSS 189
           +  I  +    VI+ +N  G+H D+ ++ +     + KD++ +++V+Q    + C    +
Sbjct: 486 IHGIFSVASASVIEKQNLEGDHSDAPMETETSFKNENKDNMDKMQVDQEEGHQKCHAEHT 545

Query: 190 ESDLQTVFKNESLNAESKSGCKLQELKAKQLIKKDTATYWPLNWRSKLCTC--QDCMKMY 247
             +     + +   A++KS    ++ +  Q +KK       L  +S LC    QD +  Y
Sbjct: 546 PEE-----EIDHTGAKTKSAVSDKQDRLNQTLKKGKVKSIDLPIQSSLCRQLGQDLLNSY 600

Query: 248 GDLDVLFLTDEYDTVLAYENKGKIAQATDRSDPLMDTLSSMNRVQQVELICEYNDLKTEL 307
                             EN+GK+                   + Q +L  E ND K  +
Sbjct: 601 -----------------IENEGKM-------------------IMQDKLEKERNDAKNAV 624

Query: 308 KDYLKRFADE-GTVVKR 323
           ++Y+  F D  GTV ++
Sbjct: 625 EEYVYDFRDRLGTVYEK 641


>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
            sapiens]
          Length = 1690

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 61   CKRPYPDPEDEIPDEMIQCVV-CEDWFHGRHLGAIPPESGDFQEMVCQACMKR 112
            C+RP  D  D      +QC   C++WFH   +G + PE  + ++ +C  C K+
Sbjct: 1615 CQRPCKDKVD-----WVQCDGGCDEWFHQVCVG-VSPEMAENEDYICINCAKK 1661



 Score = 29.6 bits (65), Expect = 4.2
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 7/30 (23%)

Query: 58   YCICKRPYPDPEDEIPDEMIQCVVCEDWFH 87
            +CIC++            M+QC +C+DWFH
Sbjct: 1163 FCICRKT-------ASGFMLQCELCKDWFH 1185


>gi|9625002 integrin, beta 6 [Homo sapiens]
          Length = 788

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 15/123 (12%)

Query: 22  RCDCGNSKFKNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPYPDPEDEIPDEMIQCVV 81
           RC+CG        CK  PD     S +   D + G  CIC   +  P   I     Q   
Sbjct: 489 RCECGEDMLSTDSCKEAPDHP---SCSGRGDCYCG-QCIC---HLSPYGNIYGPYCQ--- 538

Query: 82  CEDWFHGRHLGAIPPESGDFQEMVCQACMKRCSFLWAYAAQLAVTKISTEDDGLVRNIDG 141
           C+++   RH G +   +GD     C  C+ R  +   Y      T     +DG++    G
Sbjct: 539 CDNFSCVRHKGLLCGGNGDCD---CGECVCRSGWTGEYCNCTTSTDSCVSEDGVL--CSG 593

Query: 142 IGD 144
            GD
Sbjct: 594 RGD 596


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
            sapiens]
          Length = 2715

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)

Query: 56   GLYC-ICKRPYPDPEDEIPDEMIQCVVCEDWFHGR 89
            G YC IC R Y D + E   +M+QC  C+ W H +
Sbjct: 1335 GNYCPICTRCYEDNDYE--SKMMQCAQCDHWVHAK 1367


>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
           [Homo sapiens]
          Length = 1828

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 12/86 (13%)

Query: 151 ENGEHQDSTLKEDVPEQ-------GKDDVREVKVEQNSEPCAGSSSESD-----LQTVFK 198
           +  + +DS+L  +           G D   + + EQ S+P +G  SES+      ++  +
Sbjct: 6   DKSQEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSESQSE 65

Query: 199 NESLNAESKSGCKLQELKAKQLIKKD 224
           +ES +A SKS   L E K K   KK+
Sbjct: 66  SESESAGSKSQPVLPEAKEKPASKKE 91


>gi|110611184 chromodomain helicase DNA binding protein 2 isoform 2
           [Homo sapiens]
          Length = 501

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 12/86 (13%)

Query: 151 ENGEHQDSTLKEDVPEQ-------GKDDVREVKVEQNSEPCAGSSSESD-----LQTVFK 198
           +  + +DS+L  +           G D   + + EQ S+P +G  SES+      ++  +
Sbjct: 6   DKSQEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSESQSE 65

Query: 199 NESLNAESKSGCKLQELKAKQLIKKD 224
           +ES +A SKS   L E K K   KK+
Sbjct: 66  SESESAGSKSQPVLPEAKEKPASKKE 91


>gi|61743952 1-acylglycerol-3-phosphate O-acyltransferase 5 [Homo
           sapiens]
          Length = 364

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 12/104 (11%)

Query: 242 DCMKMYGDLDVLFLTDEYDTVLAYENKGKIAQATDRSDPLMDTLSSMNRVQQVELICEYN 301
           DCMK Y  LD +     YD  + YE K    Q   R  P M T        ++ +  +  
Sbjct: 216 DCMKNY--LDAI-----YDVTVVYEGKDDGGQR--RESPTM-TEFLCKECPKIHIHIDRI 265

Query: 302 DLKT--ELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDG 343
           D K   E +++++R+  E   +K + + +F+E    ++R+R  G
Sbjct: 266 DKKDVPEEQEHMRRWLHERFEIKDKMLIEFYESPDPERRKRFPG 309


>gi|11034855 TMEM9 domain family, member B [Homo sapiens]
          Length = 198

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/54 (31%), Positives = 23/54 (42%)

Query: 30 FKNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPYPDPEDEIPDEMIQCVVCE 83
          F+++ CK +    K NSG+ YN N     C C           PD    C+ CE
Sbjct: 37 FEDVRCKCICPPYKENSGHIYNKNISQKDCDCLHVVEPMPVRGPDVEAYCLRCE 90


>gi|118498356 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/74 (22%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 127 KISTEDDGLVRNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQNSEPCAG 186
           K+  E DG +++++ + + E++K  N E     LK+++ +  K+++  V++E+ ++  + 
Sbjct: 801 KVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEI-KALKEEIGNVQLEK-AQQLSI 858

Query: 187 SSSESDLQTVFKNE 200
           +S   +LQ + K +
Sbjct: 859 TSKVQELQNLLKGK 872


>gi|118498368 kinectin 1 isoform c [Homo sapiens]
          Length = 1300

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/74 (22%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 127 KISTEDDGLVRNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQNSEPCAG 186
           K+  E DG +++++ + + E++K  N E     LK+++ +  K+++  V++E+ ++  + 
Sbjct: 801 KVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEI-KALKEEIGNVQLEK-AQQLSI 858

Query: 187 SSSESDLQTVFKNE 200
           +S   +LQ + K +
Sbjct: 859 TSKVQELQNLLKGK 872


>gi|33620775 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/74 (22%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 127 KISTEDDGLVRNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQNSEPCAG 186
           K+  E DG +++++ + + E++K  N E     LK+++ +  K+++  V++E+ ++  + 
Sbjct: 801 KVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEI-KALKEEIGNVQLEK-AQQLSI 858

Query: 187 SSSESDLQTVFKNE 200
           +S   +LQ + K +
Sbjct: 859 TSKVQELQNLLKGK 872


>gi|194306543 oxidation resistance 1 isoform 2 [Homo sapiens]
          Length = 839

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 138 NIDGIGDQEVIKPENGEHQDSTLKEDVP----EQGKDDVREVKVEQNSEPCAGSSSES-D 192
           +I G  DQ+    EN  HQ+ + KE++P     + K      K +Q  E    S +E+ +
Sbjct: 435 SIKGNSDQDSFLHENSLHQEESQKENMPCGETAEFKQKQSVNKGKQGKEQNQDSQTEAEE 494

Query: 193 LQTVFKNESLNAESKSGCKLQELKAKQLIKKDTA 226
           L+ ++K  ++    +    +Q++  K+   K T+
Sbjct: 495 LRKLWKTHTMQQTKQQRENIQQVSQKEAKHKITS 528


>gi|194306541 oxidation resistance 1 isoform 1 [Homo sapiens]
          Length = 846

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 138 NIDGIGDQEVIKPENGEHQDSTLKEDVP----EQGKDDVREVKVEQNSEPCAGSSSES-D 192
           +I G  DQ+    EN  HQ+ + KE++P     + K      K +Q  E    S +E+ +
Sbjct: 442 SIKGNSDQDSFLHENSLHQEESQKENMPCGETAEFKQKQSVNKGKQGKEQNQDSQTEAEE 501

Query: 193 LQTVFKNESLNAESKSGCKLQELKAKQLIKKDTA 226
           L+ ++K  ++    +    +Q++  K+   K T+
Sbjct: 502 LRKLWKTHTMQQTKQQRENIQQVSQKEAKHKITS 535


>gi|117553613 coiled-coil domain containing 151 [Homo sapiens]
          Length = 595

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 282 MDTLSSMNRVQQVELICEYNDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRR 340
           ++TL S N    V L  E   L+ EL+D   +++ E T+V ++ +Q   +E   K+ RR
Sbjct: 388 LETLKSENEQTLVRLKQEKQQLQRELEDL--KYSGEATLVSQQKLQAEAQERLKKEERR 444


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,073,417
Number of Sequences: 37866
Number of extensions: 656965
Number of successful extensions: 2189
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 2111
Number of HSP's gapped (non-prelim): 140
length of query: 349
length of database: 18,247,518
effective HSP length: 103
effective length of query: 246
effective length of database: 14,347,320
effective search space: 3529440720
effective search space used: 3529440720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.