Search of human proteins with 153792148

Search of human proteins with 153792148

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|153792148 threonine synthase-like 1 [Homo sapiens]
         (743 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|153792148 threonine synthase-like 1 [Homo sapiens]                1499   0.0  
gi|149193323 threonine synthase-like 2 [Homo sapiens]                 156   8e-38
gi|31742536 fidgetin-like 1 [Homo sapiens]                             37   0.051
gi|112789543 fidgetin-like 1 [Homo sapiens]                            37   0.051
gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens]      37   0.051
gi|7706212 TAF9 RNA polymerase II, TATA box binding protein-asso...    36   0.15 
gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]            34   0.43 
gi|157671927 spermatogenesis associated 5 [Homo sapiens]               34   0.43 
gi|64084766 fidgetin [Homo sapiens]                                    34   0.56 
gi|32528306 replication factor C large subunit [Homo sapiens]          33   0.73 
gi|27436871 carboxypeptidase O [Homo sapiens]                          33   0.73 
gi|62177112 katanin p60 subunit A-like 1 [Homo sapiens]                33   0.73 
gi|14149767 katanin p60 subunit A-like 1 [Homo sapiens]                33   0.73 
gi|4506209 proteasome 26S ATPase subunit 2 [Homo sapiens]              33   0.73 
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom...    33   0.96 
gi|195539395 proteasome 26S ATPase subunit 6 [Homo sapiens]            33   0.96 
gi|27501458 CTF18, chromosome transmission fidelity factor 18 ho...    33   1.3  
gi|156564401 vesicle-fusing ATPase [Homo sapiens]                      32   1.6  
gi|113426932 PREDICTED: similar to N-ethylmaleimide-sensitive fa...    32   1.6  
gi|24497435 proteasome 26S ATPase subunit 5 [Homo sapiens]             32   1.6  
gi|7656971 phosphonoformate immuno-associated protein 5 isoform ...    32   1.6  
gi|31377667 peroxisomal LON protease-like [Homo sapiens]               32   2.1  
gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens]      32   2.1  
gi|31377846 WD repeat domain 52 [Homo sapiens]                         32   2.1  
gi|5901990 katanin p60 subunit A 1 [Homo sapiens]                      32   2.8  
gi|168823443 RAD54-like 2 [Homo sapiens]                               32   2.8  
gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens]        31   3.6  
gi|116292174 fidgetin-like 2 [Homo sapiens]                            31   3.6  
gi|6005942 valosin-containing protein [Homo sapiens]                   31   4.8  
gi|4506753 RuvB-like 1 [Homo sapiens]                                  31   4.8  

>gi|153792148 threonine synthase-like 1 [Homo sapiens]
          Length = 743

 Score = 1499 bits (3882), Expect = 0.0
 Identities = 743/743 (100%), Positives = 743/743 (100%)

Query: 1   MLHFNRCHHLKKITQKCFSSIHVKTDKHAQRFLSRTFALAELRKSWYSTHSLVGDKNIIL 60
           MLHFNRCHHLKKITQKCFSSIHVKTDKHAQRFLSRTFALAELRKSWYSTHSLVGDKNIIL
Sbjct: 1   MLHFNRCHHLKKITQKCFSSIHVKTDKHAQRFLSRTFALAELRKSWYSTHSLVGDKNIIL 60

Query: 61  MGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKLQDVGNEQFLEEEGKAVL 120
           MGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKLQDVGNEQFLEEEGKAVL
Sbjct: 61  MGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKLQDVGNEQFLEEEGKAVL 120

Query: 121 NFSASGSVISLTGSNPMHDASMWHLKKNGIIVYLDVPLLDLICRLKLMKTDRIVGQNSGT 180
           NFSASGSVISLTGSNPMHDASMWHLKKNGIIVYLDVPLLDLICRLKLMKTDRIVGQNSGT
Sbjct: 121 NFSASGSVISLTGSNPMHDASMWHLKKNGIIVYLDVPLLDLICRLKLMKTDRIVGQNSGT 180

Query: 181 SMKDLLKFRRQYYKKWYDARVFCESGASPEEVADKVLNAIKRYQDVDSETFISTRHVWPE 240
           SMKDLLKFRRQYYKKWYDARVFCESGASPEEVADKVLNAIKRYQDVDSETFISTRHVWPE
Sbjct: 181 SMKDLLKFRRQYYKKWYDARVFCESGASPEEVADKVLNAIKRYQDVDSETFISTRHVWPE 240

Query: 241 DCEQKVSAKFFSEAVIEGLASDGGLFVPAKEFPKLSCGEWKSLVGATYVERAQILLERCI 300
           DCEQKVSAKFFSEAVIEGLASDGGLFVPAKEFPKLSCGEWKSLVGATYVERAQILLERCI
Sbjct: 241 DCEQKVSAKFFSEAVIEGLASDGGLFVPAKEFPKLSCGEWKSLVGATYVERAQILLERCI 300

Query: 301 HPADIPAARLGEMIETAYGENFACSKIAPVRHLSGNQFILELFHGPTGSFKDLSLQLMPH 360
           HPADIPAARLGEMIETAYGENFACSKIAPVRHLSGNQFILELFHGPTGSFKDLSLQLMPH
Sbjct: 301 HPADIPAARLGEMIETAYGENFACSKIAPVRHLSGNQFILELFHGPTGSFKDLSLQLMPH 360

Query: 361 IFAHCIPPSCNYMILVATSGDTGSAVLNGFSRLNKNDKQRIAVVAFFPENGVSDFQKAQI 420
           IFAHCIPPSCNYMILVATSGDTGSAVLNGFSRLNKNDKQRIAVVAFFPENGVSDFQKAQI
Sbjct: 361 IFAHCIPPSCNYMILVATSGDTGSAVLNGFSRLNKNDKQRIAVVAFFPENGVSDFQKAQI 420

Query: 421 IGSQRENGWAVGVESDFDFCQTAIKRIFNDSDFTGFLTVEYGTILSSANSINWGRLLPQV 480
           IGSQRENGWAVGVESDFDFCQTAIKRIFNDSDFTGFLTVEYGTILSSANSINWGRLLPQV
Sbjct: 421 IGSQRENGWAVGVESDFDFCQTAIKRIFNDSDFTGFLTVEYGTILSSANSINWGRLLPQV 480

Query: 481 VYHASAYLDLVSQGFISFGSPVDVCIPTGNFGNILAAVYAKMMGIPIRKFICASNQNHVL 540
           VYHASAYLDLVSQGFISFGSPVDVCIPTGNFGNILAAVYAKMMGIPIRKFICASNQNHVL
Sbjct: 481 VYHASAYLDLVSQGFISFGSPVDVCIPTGNFGNILAAVYAKMMGIPIRKFICASNQNHVL 540

Query: 541 TDFIKTGHYDLRERKLAQTFSPSIDILKSSNLERHLHLMANKDGQLMTELFNRLESQHHF 600
           TDFIKTGHYDLRERKLAQTFSPSIDILKSSNLERHLHLMANKDGQLMTELFNRLESQHHF
Sbjct: 541 TDFIKTGHYDLRERKLAQTFSPSIDILKSSNLERHLHLMANKDGQLMTELFNRLESQHHF 600

Query: 601 QIEKALVEKLQQDFVADWCSEGECLAAINSTYNTSGYILDPHTAVAKVVADRVQDKTCPV 660
           QIEKALVEKLQQDFVADWCSEGECLAAINSTYNTSGYILDPHTAVAKVVADRVQDKTCPV
Sbjct: 601 QIEKALVEKLQQDFVADWCSEGECLAAINSTYNTSGYILDPHTAVAKVVADRVQDKTCPV 660

Query: 661 IISSTAHYSKFAPAIMQALKIKEINETSSSQLYLLGSYNALPPLHEALLERTKQQEKMEY 720
           IISSTAHYSKFAPAIMQALKIKEINETSSSQLYLLGSYNALPPLHEALLERTKQQEKMEY
Sbjct: 661 IISSTAHYSKFAPAIMQALKIKEINETSSSQLYLLGSYNALPPLHEALLERTKQQEKMEY 720

Query: 721 QVCAADMNVLKSHVEQLVQNQFI 743
           QVCAADMNVLKSHVEQLVQNQFI
Sbjct: 721 QVCAADMNVLKSHVEQLVQNQFI 743


>gi|149193323 threonine synthase-like 2 [Homo sapiens]
          Length = 484

 Score =  156 bits (394), Expect = 8e-38
 Identities = 131/456 (28%), Positives = 210/456 (46%), Gaps = 35/456 (7%)

Query: 231 FISTRHVWPEDCEQKVSAKFFSEAVIEGLASDGGLFVPAKEFPKLSCG---EWKSLVGAT 287
           ++STR V P     +V+   F  A+  G A DGGLF+P +E P+L  G   +W +L   +
Sbjct: 3   YVSTRGVAP-----RVN---FEGALFSGYAPDGGLFMP-EELPQLDRGTLCQWSTL---S 50

Query: 288 YVERAQILLERCIHPADIPAARLGEMIETAYGENFACSKIAPVRHLSGNQFILELFHGPT 347
           Y    + L    I    +P   L ++I+ A+   F   ++  +  L     +LEL+HG T
Sbjct: 51  YPGLVKELCALFIGSELLPKDELNDLIDRAFSR-FRHREVVHLSRLRNGLNVLELWHGVT 109

Query: 348 GSFKDLSLQLMPHIFAHCIPPSCNYM-ILVATSGDTGSAVLNGFSRLNKNDKQRIAVVAF 406
            +FKDLSL        + +     ++ ++V TSGDTGSA +         D     ++  
Sbjct: 110 YAFKDLSLSCTTQFLQYFLEKREKHVTVVVGTSGDTGSAAIESVQGAKNMD-----IIVL 164

Query: 407 FPENGVSDFQKAQIIGSQRENGWAVGVESDFDFCQTAIKRIFNDSDFTGFLTVEYGTILS 466
            P+   +  Q+ Q+    ++N    GVE + D     IK +F D  F           L 
Sbjct: 165 LPKGHCTKIQELQMTTVLKQNVHVFGVEGNSDELDEPIKTVFADVAFVKKHN------LM 218

Query: 467 SANSINWGRLLPQVVYHASAYLDLVSQGFISFGSPVDVCIPTGNFGNILAAVYAKMMGIP 526
           S NSINW R+L Q+ +H  AY              V+V +PTG  GN+ A   A+ +G+P
Sbjct: 219 SLNSINWSRVLVQMAHHFFAYFQCTPSLDTHPLPLVEVVVPTGAAGNLAAGYIAQKIGLP 278

Query: 527 IRKFICASNQNHVLTDFIKTGHYDLRERKLAQTFSPSIDILKSSNLERHLHLMANKDGQL 586
           IR  + A N+N ++   ++ G + L E  +  T + ++DI    N+ER   L++  D Q+
Sbjct: 279 IR-LVVAVNRNDIIHRTVQQGDFSLSEA-VKSTLASAMDIQVPYNMERVFWLLSGSDSQV 336

Query: 587 MTELFNRLESQHHFQIEKALVEKLQQDFVADWCSEGECLAAINSTYNTSGYILDPHTAVA 646
              L  + E      + K L  KL +   +   S+      +   ++ + Y+L PH+AVA
Sbjct: 337 TRALMEQFERTQSVNLPKELHSKLSEAVTSVSVSDEAITQTMGRCWDENQYLLCPHSAVA 396

Query: 647 ----KVVADRVQDKTCPVIISSTAHYSKFAPAIMQA 678
                   DR Q  T P    + A  +KF  A++ A
Sbjct: 397 VNYHYQQIDRQQPST-PRCCLAPASAAKFPEAVLAA 431


>gi|31742536 fidgetin-like 1 [Homo sapiens]
          Length = 674

 Score = 37.4 bits (85), Expect = 0.051
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTW 95
           K I+L GPPG GKT +G+ I  + G     +    L   W
Sbjct: 435 KGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKW 474


>gi|112789543 fidgetin-like 1 [Homo sapiens]
          Length = 674

 Score = 37.4 bits (85), Expect = 0.051
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTW 95
           K I+L GPPG GKT +G+ I  + G     +    L   W
Sbjct: 435 KGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKW 474


>gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens]
          Length = 361

 Score = 37.4 bits (85), Expect = 0.051
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTW 95
           K ++L GPPG GKT + +   ++ GC  I++    L   W
Sbjct: 127 KGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKW 166


>gi|7706212 TAF9 RNA polymerase II, TATA box binding
           protein-associated factor isoform b [Homo sapiens]
          Length = 172

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 8/55 (14%)

Query: 57  NIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKLQDVGNEQF 111
           NI+L G PG GKTT+G+ +  K G   I+V D        ++  E+L D  +E++
Sbjct: 5   NILLTGTPGVGKTTLGKELASKSGLKYINVGD--------LAREEQLYDGYDEEY 51


>gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]
          Length = 980

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 20/55 (36%), Positives = 28/55 (50%)

Query: 52  LVGDKNIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKLQDV 106
           L G  +++L GPPG GKTTV       LG  ++ V    L    + +V  KLQ +
Sbjct: 460 LTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAI 514


>gi|157671927 spermatogenesis associated 5 [Homo sapiens]
          Length = 893

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 15/66 (22%), Positives = 32/66 (48%)

Query: 47  YSTHSLVGDKNIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKLQDV 106
           + ++ +   + ++L GPPG GKT + R +  ++G  V  ++   +   +      KL+ +
Sbjct: 379 FKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQI 438

Query: 107 GNEQFL 112
             E  L
Sbjct: 439 FAEATL 444


>gi|64084766 fidgetin [Homo sapiens]
          Length = 759

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKL 103
           ++I+L GP G GKT +GR I  +LG     +    L   W +  +EK+
Sbjct: 520 RSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKW-LGEAEKI 566


>gi|32528306 replication factor C large subunit [Homo sapiens]
          Length = 1147

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDVD--DDILEKTWNMSVSEKLQDVGNEQF 111
           K  +L GPPG GKTT   ++ Q+LG   ++++  D   + +    V+E L +   + F
Sbjct: 644 KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGF 701


>gi|27436871 carboxypeptidase O [Homo sapiens]
          Length = 374

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 5/99 (5%)

Query: 571 NLERHLHLMANKDGQLMTELFNRL--ESQHHFQIEKALVEKLQQDFVADWCSEGECLAAI 628
           NL+ ++  + N DG + T   +RL  +S+            L ++F A WCS G      
Sbjct: 141 NLDFYVLPVLNIDGYIYTWTTDRLWRKSRSPHNNGTCFGTDLNRNFNASWCSIGASRNCQ 200

Query: 629 NSTYNTSGYILDPHTAVAKVVADRVQDKTCPVIISSTAH 667
           + T+  +G + +P T   K VA  ++ K   ++   T H
Sbjct: 201 DQTFCGTGPVSEPET---KAVASFIESKKDDILCFLTMH 236


>gi|62177112 katanin p60 subunit A-like 1 [Homo sapiens]
          Length = 490

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 4/100 (4%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKLQDVGNEQFLEEE 115
           K ++++GPPG GKT + + +  + G    +V    L   +    SEKL  +  E      
Sbjct: 242 KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYR-GESEKLVRLLFE-MARFY 299

Query: 116 GKAVLNFSASGSVISLTGSNPMHDASMWHLKKNGIIVYLD 155
               +      S+ S  G++  H+AS     K+ +++ +D
Sbjct: 300 APTTIFIDEIDSICSRRGTSDEHEAS--RRVKSELLIQMD 337


>gi|14149767 katanin p60 subunit A-like 1 [Homo sapiens]
          Length = 490

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 4/100 (4%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKLQDVGNEQFLEEE 115
           K ++++GPPG GKT + + +  + G    +V    L   +    SEKL  +  E      
Sbjct: 242 KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYR-GESEKLVRLLFE-MARFY 299

Query: 116 GKAVLNFSASGSVISLTGSNPMHDASMWHLKKNGIIVYLD 155
               +      S+ S  G++  H+AS     K+ +++ +D
Sbjct: 300 APTTIFIDEIDSICSRRGTSDEHEAS--RRVKSELLIQMD 337


>gi|4506209 proteasome 26S ATPase subunit 2 [Homo sapiens]
          Length = 433

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDV 86
           K ++L GPPG GKT   R +  +   C I V
Sbjct: 210 KGVLLFGPPGTGKTLCARAVANRTDACFIRV 240


>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
            sapiens]
          Length = 1911

 Score = 33.1 bits (74), Expect = 0.96
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 58   IILMGPPGAGKTTVGRIIGQKLGCCVID----VDDDILEKTWNMSVSEKLQDVGNEQFLE 113
            I L+GP G+GKT  GR + +KL    I     + + +L KT      E  +D  NEQ  +
Sbjct: 994  ICLVGPQGSGKTMCGRQLAEKLNIFHIQFEEVLQEKLLLKTEKKVGPEFEEDSENEQAAK 1053

Query: 114  EE 115
            +E
Sbjct: 1054 QE 1055


>gi|195539395 proteasome 26S ATPase subunit 6 [Homo sapiens]
          Length = 403

 Score = 33.1 bits (74), Expect = 0.96
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 52  LVGDKNIILMGPPGAGKTTVGRIIGQKLGCCVIDV 86
           ++  K  +L GPPG GKT + R +  +L C  + V
Sbjct: 178 IIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 212


>gi|27501458 CTF18, chromosome transmission fidelity factor 18
           homolog [Homo sapiens]
          Length = 975

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 13/32 (40%), Positives = 21/32 (65%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDVD 87
           K  +L GPPG GKTT+  +I +  G  V++++
Sbjct: 368 KVALLCGPPGLGKTTLAHVIARHAGYSVVEMN 399


>gi|156564401 vesicle-fusing ATPase [Homo sapiens]
          Length = 744

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKL 79
           K I+L GPPG GKT + R IG+ L
Sbjct: 254 KGILLYGPPGCGKTLLARQIGKML 277


>gi|113426932 PREDICTED: similar to N-ethylmaleimide-sensitive
           factor [Homo sapiens]
          Length = 563

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKL 79
           K I+L GPPG GKT + R IG+ L
Sbjct: 327 KGILLYGPPGCGKTLLARQIGKML 350


>gi|24497435 proteasome 26S ATPase subunit 5 [Homo sapiens]
          Length = 406

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDV 86
           K ++L GPPG GKT + R +     C  I V
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRV 214


>gi|7656971 phosphonoformate immuno-associated protein 5 isoform 2
           [Homo sapiens]
          Length = 583

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 9/78 (11%)

Query: 12  KITQKCFSSIHVKTDKHAQRFLSRTFALAELRKSWYSTHSLVGDKNIILMGPPGAGKTTV 71
           ++ ++C+    +       RF+++ F   +L K        +    I+L G PG+GKTT+
Sbjct: 367 EVRERCWKDHCMDKHNGTDRFVNQQFQEEKLNK--------LQKLLILLRGLPGSGKTTL 418

Query: 72  GRI-IGQKLGCCVIDVDD 88
            RI +GQ     V   DD
Sbjct: 419 SRILLGQNRDGIVFSTDD 436


>gi|31377667 peroxisomal LON protease-like [Homo sapiens]
          Length = 852

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query: 58  IILMGPPGAGKTTVGRIIGQKLG 80
           +  +GPPG GKT+VGR + + LG
Sbjct: 371 LCFVGPPGVGKTSVGRSVAKTLG 393


>gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens]
          Length = 4158

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 13/23 (56%), Positives = 18/23 (78%)

Query: 58   IILMGPPGAGKTTVGRIIGQKLG 80
            ++L+GP G GKTTV RI+ + LG
Sbjct: 1749 VMLVGPTGGGKTTVYRILAETLG 1771


>gi|31377846 WD repeat domain 52 [Homo sapiens]
          Length = 982

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 12/34 (35%), Positives = 25/34 (73%)

Query: 114 EEGKAVLNFSASGSVISLTGSNPMHDASMWHLKK 147
           E+G A ++F+ SG++++  GSNP +  ++W+ K+
Sbjct: 228 EKGYAYVDFNYSGNLLASVGSNPDYTLTIWNWKE 261


>gi|5901990 katanin p60 subunit A 1 [Homo sapiens]
          Length = 491

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 2/86 (2%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKLQDVGNEQFLEEE 115
           K ++++GPPG GKT + + +  +      +V    L   +    SEKL  +  E      
Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYR-GESEKLVRLLFE-MARFY 300

Query: 116 GKAVLNFSASGSVISLTGSNPMHDAS 141
             A +      S+ S  G++  H+AS
Sbjct: 301 SPATIFIDEIDSICSRRGTSEEHEAS 326


>gi|168823443 RAD54-like 2 [Homo sapiens]
          Length = 1467

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 1/111 (0%)

Query: 126  GSVISLTGSNPMHDASMWHLKKNGIIVYLDVPLLDLICRLKLMKTDRIVGQNSGTSMKDL 185
            GSV S + +NP  +  + +L++ G++V   V   D++       TD     N+G S+  +
Sbjct: 1042 GSVSSASSTNPSMNFPINYLQRAGVLVQKVVTTTDIVIPGLNSSTDVQARINAGESI-HI 1100

Query: 186  LKFRRQYYKKWYDARVFCESGASPEEVADKVLNAIKRYQDVDSETFISTRH 236
            ++  +  Y +  D R+F        +V +    A    Q    E+  + RH
Sbjct: 1101 IRGTKGTYIRTSDGRIFAVRATGKPKVPEDGRMAASGSQGPSCESTSNGRH 1151


>gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens]
          Length = 753

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 52  LVGDKNIILMGPPGAGKTTVGRIIGQKLGCCVIDV 86
           L   K ++L GPPG  KTT+ R +     C  + V
Sbjct: 495 LTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSV 529



 Score = 30.0 bits (66), Expect = 8.1
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILE 92
           + ++L GPPG GKT + R + ++ G  ++ V    L+
Sbjct: 235 RGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQ 271


>gi|116292174 fidgetin-like 2 [Homo sapiens]
          Length = 653

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 51  SLVGDKNIILMGPPGAGKTTVGRIIGQKLGCCVI 84
           SL   + ++L GP GAGK  +GR +  +LG  ++
Sbjct: 421 SLRPPRTVLLFGPRGAGKALLGRCLATQLGATLL 454


>gi|6005942 valosin-containing protein [Homo sapiens]
          Length = 806

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLG 80
           + I+L GPPG GKT + R +  + G
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETG 263



 Score = 30.4 bits (67), Expect = 6.2
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 56  KNIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKLQDVGNEQFLEEE 115
           K ++  GPPG GKT + + I  +     I +    L   W       ++++ ++    + 
Sbjct: 512 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDK--ARQA 569

Query: 116 GKAVLNFSASGSVISLTGSN 135
              VL F    S+    G N
Sbjct: 570 APCVLFFDELDSIAKARGGN 589


>gi|4506753 RuvB-like 1 [Homo sapiens]
          Length = 456

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 58 IILMGPPGAGKTTVGRIIGQKLG 80
          ++L GPPG GKT +   I Q+LG
Sbjct: 66 VLLAGPPGTGKTALALAIAQELG 88


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,079,634
Number of Sequences: 37866
Number of extensions: 1163389
Number of successful extensions: 2810
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2753
Number of HSP's gapped (non-prelim): 61
length of query: 743
length of database: 18,247,518
effective HSP length: 110
effective length of query: 633
effective length of database: 14,082,258
effective search space: 8914069314
effective search space used: 8914069314
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.