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Search of human proteins with 153791492
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153791492 eukaryotic translation initiation factor 3,
subunit C-like [Homo sapiens]
(914 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153791492 eukaryotic translation initiation factor 3, subunit... 1826 0.0
gi|83700233 eukaryotic translation initiation factor 3, subunit ... 1819 0.0
gi|4503525 eukaryotic translation initiation factor 3, subunit C... 1819 0.0
gi|55956788 nucleolin [Homo sapiens] 75 2e-13
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 67 6e-11
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 67 6e-11
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 63 1e-09
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 62 2e-09
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 62 2e-09
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 61 4e-09
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 61 4e-09
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 59 2e-08
gi|11225260 DNA topoisomerase I [Homo sapiens] 58 5e-08
gi|217330641 IWS1 homolog [Homo sapiens] 57 1e-07
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 56 1e-07
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 56 1e-07
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 56 2e-07
gi|115529449 upstream binding transcription factor, RNA polymera... 56 2e-07
gi|115529451 upstream binding transcription factor, RNA polymera... 56 2e-07
gi|7657671 upstream binding transcription factor, RNA polymerase... 56 2e-07
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 55 2e-07
gi|31317305 M-phase phosphoprotein 10 [Homo sapiens] 55 4e-07
gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 55 4e-07
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 54 5e-07
gi|221219020 NYD-SP11 protein [Homo sapiens] 54 7e-07
gi|4557509 cylicin 2 [Homo sapiens] 54 7e-07
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 54 7e-07
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 54 9e-07
gi|21735415 centromere protein B [Homo sapiens] 54 9e-07
gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo... 54 9e-07
>gi|153791492 eukaryotic translation initiation factor 3, subunit
C-like [Homo sapiens]
Length = 914
Score = 1826 bits (4729), Expect = 0.0
Identities = 914/914 (100%), Positives = 914/914 (100%)
Query: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNEL 120
TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNEL
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNEL 120
Query: 121 WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG 180
WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG
Sbjct: 121 WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG 180
Query: 181 SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS 240
SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS
Sbjct: 181 SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS 240
Query: 241 DSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNEGG 300
DSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNEGG
Sbjct: 241 DSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNEGG 300
Query: 301 EWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQIELLQLLVQ 360
EWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQIELLQLLVQ
Sbjct: 301 EWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQIELLQLLVQ 360
Query: 361 IAAENNLGEGVIVKIKFNIIASLYDYNPNLATYMKPEMWGKCLDCINELMDILFANPNIF 420
IAAENNLGEGVIVKIKFNIIASLYDYNPNLATYMKPEMWGKCLDCINELMDILFANPNIF
Sbjct: 361 IAAENNLGEGVIVKIKFNIIASLYDYNPNLATYMKPEMWGKCLDCINELMDILFANPNIF 420
Query: 421 VGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQV 480
VGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQV
Sbjct: 421 VGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQV 480
Query: 481 CAIIERVQRYLEEKGTTEEVCRIYLLRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAEN 540
CAIIERVQRYLEEKGTTEEVCRIYLLRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAEN
Sbjct: 481 CAIIERVQRYLEEKGTTEEVCRIYLLRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAEN 540
Query: 541 EGEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQ 600
EGEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQ
Sbjct: 541 EGEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQ 600
Query: 601 HADPPVQILYNRTMVQLGICAFRQGLTKDAHNALLDIQSSGRAKELLGQGLLLRSLQERN 660
HADPPVQILYNRTMVQLGICAFRQGLTKDAHNALLDIQSSGRAKELLGQGLLLRSLQERN
Sbjct: 601 HADPPVQILYNRTMVQLGICAFRQGLTKDAHNALLDIQSSGRAKELLGQGLLLRSLQERN 660
Query: 661 QEQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLR 720
QEQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLR
Sbjct: 661 QEQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLR 720
Query: 721 VGERQPLLGPPESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTML 780
VGERQPLLGPPESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTML
Sbjct: 721 VGERQPLLGPPESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTML 780
Query: 781 VRKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPT 840
VRKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPT
Sbjct: 781 VRKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPT 840
Query: 841 QTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFRDQKDGYRKNEGYM 900
QTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFRDQKDGYRKNEGYM
Sbjct: 841 QTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFRDQKDGYRKNEGYM 900
Query: 901 RRGGYRQQQSQTAY 914
RRGGYRQQQSQTAY
Sbjct: 901 RRGGYRQQQSQTAY 914
>gi|83700233 eukaryotic translation initiation factor 3, subunit C
[Homo sapiens]
Length = 913
Score = 1819 bits (4712), Expect = 0.0
Identities = 913/914 (99%), Positives = 913/914 (99%), Gaps = 1/914 (0%)
Query: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNEL 120
TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNEL
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNEL 120
Query: 121 WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG 180
WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG
Sbjct: 121 WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG 180
Query: 181 SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS 240
SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS
Sbjct: 181 SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS 240
Query: 241 DSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNEGG 300
DSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEE DNEGG
Sbjct: 241 DSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEE-DNEGG 299
Query: 301 EWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQIELLQLLVQ 360
EWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQIELLQLLVQ
Sbjct: 300 EWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQIELLQLLVQ 359
Query: 361 IAAENNLGEGVIVKIKFNIIASLYDYNPNLATYMKPEMWGKCLDCINELMDILFANPNIF 420
IAAENNLGEGVIVKIKFNIIASLYDYNPNLATYMKPEMWGKCLDCINELMDILFANPNIF
Sbjct: 360 IAAENNLGEGVIVKIKFNIIASLYDYNPNLATYMKPEMWGKCLDCINELMDILFANPNIF 419
Query: 421 VGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQV 480
VGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQV
Sbjct: 420 VGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQV 479
Query: 481 CAIIERVQRYLEEKGTTEEVCRIYLLRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAEN 540
CAIIERVQRYLEEKGTTEEVCRIYLLRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAEN
Sbjct: 480 CAIIERVQRYLEEKGTTEEVCRIYLLRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAEN 539
Query: 541 EGEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQ 600
EGEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQ
Sbjct: 540 EGEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQ 599
Query: 601 HADPPVQILYNRTMVQLGICAFRQGLTKDAHNALLDIQSSGRAKELLGQGLLLRSLQERN 660
HADPPVQILYNRTMVQLGICAFRQGLTKDAHNALLDIQSSGRAKELLGQGLLLRSLQERN
Sbjct: 600 HADPPVQILYNRTMVQLGICAFRQGLTKDAHNALLDIQSSGRAKELLGQGLLLRSLQERN 659
Query: 661 QEQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLR 720
QEQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLR
Sbjct: 660 QEQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLR 719
Query: 721 VGERQPLLGPPESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTML 780
VGERQPLLGPPESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTML
Sbjct: 720 VGERQPLLGPPESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTML 779
Query: 781 VRKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPT 840
VRKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPT
Sbjct: 780 VRKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPT 839
Query: 841 QTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFRDQKDGYRKNEGYM 900
QTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFRDQKDGYRKNEGYM
Sbjct: 840 QTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFRDQKDGYRKNEGYM 899
Query: 901 RRGGYRQQQSQTAY 914
RRGGYRQQQSQTAY
Sbjct: 900 RRGGYRQQQSQTAY 913
>gi|4503525 eukaryotic translation initiation factor 3, subunit C
[Homo sapiens]
Length = 913
Score = 1819 bits (4712), Expect = 0.0
Identities = 913/914 (99%), Positives = 913/914 (99%), Gaps = 1/914 (0%)
Query: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNEL 120
TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNEL
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNEL 120
Query: 121 WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG 180
WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG
Sbjct: 121 WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG 180
Query: 181 SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS 240
SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS
Sbjct: 181 SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS 240
Query: 241 DSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNEGG 300
DSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEE DNEGG
Sbjct: 241 DSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEE-DNEGG 299
Query: 301 EWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQIELLQLLVQ 360
EWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQIELLQLLVQ
Sbjct: 300 EWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQIELLQLLVQ 359
Query: 361 IAAENNLGEGVIVKIKFNIIASLYDYNPNLATYMKPEMWGKCLDCINELMDILFANPNIF 420
IAAENNLGEGVIVKIKFNIIASLYDYNPNLATYMKPEMWGKCLDCINELMDILFANPNIF
Sbjct: 360 IAAENNLGEGVIVKIKFNIIASLYDYNPNLATYMKPEMWGKCLDCINELMDILFANPNIF 419
Query: 421 VGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQV 480
VGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQV
Sbjct: 420 VGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQV 479
Query: 481 CAIIERVQRYLEEKGTTEEVCRIYLLRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAEN 540
CAIIERVQRYLEEKGTTEEVCRIYLLRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAEN
Sbjct: 480 CAIIERVQRYLEEKGTTEEVCRIYLLRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAEN 539
Query: 541 EGEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQ 600
EGEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQ
Sbjct: 540 EGEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQ 599
Query: 601 HADPPVQILYNRTMVQLGICAFRQGLTKDAHNALLDIQSSGRAKELLGQGLLLRSLQERN 660
HADPPVQILYNRTMVQLGICAFRQGLTKDAHNALLDIQSSGRAKELLGQGLLLRSLQERN
Sbjct: 600 HADPPVQILYNRTMVQLGICAFRQGLTKDAHNALLDIQSSGRAKELLGQGLLLRSLQERN 659
Query: 661 QEQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLR 720
QEQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLR
Sbjct: 660 QEQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLR 719
Query: 721 VGERQPLLGPPESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTML 780
VGERQPLLGPPESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTML
Sbjct: 720 VGERQPLLGPPESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTML 779
Query: 781 VRKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPT 840
VRKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPT
Sbjct: 780 VRKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPT 839
Query: 841 QTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFRDQKDGYRKNEGYM 900
QTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFRDQKDGYRKNEGYM
Sbjct: 840 QTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFRDQKDGYRKNEGYM 899
Query: 901 RRGGYRQQQSQTAY 914
RRGGYRQQQSQTAY
Sbjct: 900 RRGGYRQQQSQTAY 913
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 75.5 bits (184), Expect = 2e-13
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 160 KQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDED 219
K++ ++ D+D+E++EED E DEDEDED + A +K + AP+ E +D++
Sbjct: 142 KEDSDEEEDDDSEEDEEDDE---DEDEDEDEIEPAA-MKAAAAAPASED-------EDDE 190
Query: 220 EDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAK 279
+D +D +DD+D + S ++ +GK+ A K DED++ ++ +D
Sbjct: 191 DDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDD 250
Query: 280 KKHDRKSKRLDEEEEEDNE-------GGEWERVRGGVPLVKEKPKMFAKGTEITHA 328
+ + DEEEEE+ E G+ ++ E K +GTE T A
Sbjct: 251 EDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTA 306
Score = 43.5 bits (101), Expect = 9e-04
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
Query: 203 APSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPT 262
A ++ K KK D ++E+ +DSE+DE+ D + + E K A A +
Sbjct: 131 AKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDE 190
Query: 263 TDEDKKAAEKKRED---------------KAKKKHDRKSKRL--DEEEEEDNE 298
DED + + ED KA K K+K + DE+EEED+E
Sbjct: 191 DDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDE 243
Score = 32.3 bits (72), Expect = 2.1
Identities = 22/118 (18%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 112 DLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDA 171
D +D +E ED + ++ + + +A+ T K +K + + ++ ++ D++
Sbjct: 186 DEDDEDDEDDEDDDDDEE-DDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDED 244
Query: 172 EKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDE 229
E +++D + D+DED++ + EAP ++ K+ + + E E
Sbjct: 245 EDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTE 302
Score = 32.0 bits (71), Expect = 2.7
Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 169 EDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFL----KKMDDEDEDSED 224
++ E++ ED E S DE++D G KK +A + ++K + KK+ +
Sbjct: 22 KEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKA 81
Query: 225 S----EDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKK 280
+ + T + + + GK+ A + L P A+ + K K
Sbjct: 82 AVTPGKKAAATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAK 141
Query: 281 KHDRKSKRLDEEEEEDNE 298
K D + D+ EE++ +
Sbjct: 142 KEDSDEEEDDDSEEDEED 159
Score = 31.6 bits (70), Expect = 3.5
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 200 KSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRF--- 256
K+ G+ +K + +EDSED E ED + S+ + +++GK+ A S
Sbjct: 6 KAGKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVV 65
Query: 257 ---LKKAPTTDEDKKAA 270
KK KKAA
Sbjct: 66 VSPTKKVAVATPAKKAA 82
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 67.4 bits (163), Expect = 6e-11
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 160 KQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKK---SEAPSGESRKFLKKMD 216
KQN E DE+A KN+ +SE SD +E + L+ K S+ SGE +K K
Sbjct: 1267 KQNEENPGDEEA-KNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEH 1325
Query: 217 DEDE-------DSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKA 269
E + SEDSED + ++G + S+SE+E+ +T R KKA + +
Sbjct: 1326 KEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRT----RSAKKAELEENQRSY 1381
Query: 270 AEKKREDKAKKKHDRKSKRLDEEEEEDNEGGEWE 303
+KK+ + K + D S+ EEE+ E E E
Sbjct: 1382 KQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEE 1415
Score = 47.8 bits (112), Expect = 5e-05
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 131 NKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDG 190
++N+ S+ QKI+ + ++S+ + S DE K+ + D+D D +
Sbjct: 1174 DQNSIGEGSSDEQKIKPVTENLV--LSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPEN 1231
Query: 191 VSAATFLKKKSEAPSGESRKFLKKMDDEDED--------SEDSEDDEDWDTGSTSSDSDS 242
A L ++ +A DDE E+ +E++ DE+ +S+SDS
Sbjct: 1232 RIAKKMLLEEIKANLSSDED--GSSDDEPEEGKKRTGKQNEENPGDEE-AKNQVNSESDS 1288
Query: 243 EEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKK----KHDRKSKRLDEEEEEDNE 298
+ EE K+ R L+ T + + EKK + K K ++ RK D E+ + E
Sbjct: 1289 DSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQE 1348
Query: 299 GGEWERV 305
G E V
Sbjct: 1349 SGVSEEV 1355
Score = 43.1 bits (100), Expect = 0.001
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 128 KKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDE--- 184
KK N S+ +K K D + H + K + E S+D DAE+ +E SS E
Sbjct: 800 KKRIPNTKDFDSSEDEKHSKKGMDNQGH-KNLKTSQEGSSD-DAERKQERETFSSAEGTV 857
Query: 185 DEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEE 244
D+D + L KK +A + S + K+ +++ E + +T S ++
Sbjct: 858 DKDTTIMELRDRLPKKQQASA--STDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKT 915
Query: 245 EEGKQTAL---ASRFLKKAP---TTDEDKKAAEKKREDKAKKKHDRKSK--RLDEEEEED 296
+ Q L A +FLKK T+++DKK ++K E+K KK D K K +++++ E
Sbjct: 916 CKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEK-KKPSDFKKKVIKMEQQYESS 974
Query: 297 NEGGE 301
++G E
Sbjct: 975 SDGTE 979
Score = 41.6 bits (96), Expect = 0.003
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 122 EDKEGKKKMNKNNAKALSTLRQ-KIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG 180
ED++ + + A+ R K +K R + S +N S +E+ EK EE+ E
Sbjct: 1359 EDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEE 1418
Query: 181 SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS 240
+E+E+ED S++P G+ RK ++K+ +D+ T + +
Sbjct: 1419 EEEEEEEEDE-------NDDSKSP-GKGRKKIRKILKDDK-------------LRTETQN 1457
Query: 241 DSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNE 298
+EEE ++ +A R + +K + ED + K +K + +E+EE E
Sbjct: 1458 ALKEEEERRKRIAER------EREREKLREVIEIEDASPTKCPITTKLVLDEDEETKE 1509
Score = 41.2 bits (95), Expect = 0.004
Identities = 56/289 (19%), Positives = 113/289 (39%), Gaps = 31/289 (10%)
Query: 18 SGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEELTNLIRTIRNAMKIRDVT 77
SG+E ++K V P+ + +D++D R AK EE+ + + + +
Sbjct: 1207 SGDEALSKSV-------PVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPE 1259
Query: 78 KCLE-----------EFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNELWEDKEG 126
+ + + E + ++ S ++ PR+ R+L + E E
Sbjct: 1260 EGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDG--ESGEE 1317
Query: 127 KKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDE 186
KK K + + R+K+ + + +S + E S ED ++ S ++ +E
Sbjct: 1318 KKTKPKEHKEVKGRNRRKVSSEDSE-DSDFQESGVSEEVSESEDEQRPRTRSAKKAELEE 1376
Query: 187 DEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEE 246
++ KK+ E K + E+E+ E E++E+ + + EE+E
Sbjct: 1377 NQRSYKQK---KKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEE-----EEEEEEEEEDE 1428
Query: 247 GKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEE 295
+ + KK +D K + A K+ + + KR+ E E E
Sbjct: 1429 NDDSKSPGKGRKKIRKILKDDKL--RTETQNALKEEEERRKRIAERERE 1475
Score = 39.7 bits (91), Expect = 0.013
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 31/206 (15%)
Query: 114 EDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPE--------- 164
+D +E ED + + K K S ++K+ K + +ES ++ PE
Sbjct: 933 KDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQYESSSDGTEKLPEREEICHFPK 992
Query: 165 -----QSADEDAEKNEEDSEGSSDEDEDE------------DGVSAATFLKKKSEAPSGE 207
++ D EK + + + +DE D ++ K K+ A E
Sbjct: 993 GIKQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDSCDSSEDKKSKNGAYGRE 1052
Query: 208 SR--KFLKKMDDEDED--SEDSEDDEDWDTGSTSSDSDSEEEEGKQTA-LASRFLKKAPT 262
+ K L K + +D S D+E + G SSD + E ++ L+S+ K
Sbjct: 1053 KKRCKLLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQ 1112
Query: 263 TDEDKKAAEKKREDKAKKKHDRKSKR 288
+ AE+ ED KKK SK+
Sbjct: 1113 SGSSSSDAEESSEDNKKKKQRTSSKK 1138
Score = 38.9 bits (89), Expect = 0.022
Identities = 70/335 (20%), Positives = 122/335 (36%), Gaps = 44/335 (13%)
Query: 9 SDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEELTNL---IR 65
S+ + + S G E KP ++ K+ + + + E + ++ EE+ + I+
Sbjct: 940 SEDDKKQSKKGTEEKKKP--SDFKKKVIKMEQQYESSSDGTEKLPER--EEICHFPKGIK 995
Query: 66 TIRN--------AMKIRDVT--KCLEEFELLGKAYGKAKSIVDKE---------GVPRFY 106
I+N + KIRD T K E + K+ GK S E G +
Sbjct: 996 QIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDSCDSSEDKKSKNGAYGREKKR 1055
Query: 107 IRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQS 166
++L + K M ++ + ++I R S + K+ S
Sbjct: 1056 CKLLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQSGS 1115
Query: 167 ADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSE 226
+ DAE++ ED++ + A +K+K S K K+ D S D E
Sbjct: 1116 SSSDAEESSEDNKKKKQRTSSK---KKAVIVKEKKRNSLRTSTK-RKQADITSSSSSDIE 1171
Query: 227 DDEDWDTGSTSSDSDSEEEEGKQTALASR-----------FLKKAPTT---DEDKKAAEK 272
DD+ G SSD + + L+S K P T D+D E
Sbjct: 1172 DDDQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPEN 1231
Query: 273 KREDKAKKKHDRKSKRLDEEEEEDNEGGEWERVRG 307
+ K + + + DE+ D+E E ++ G
Sbjct: 1232 RIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTG 1266
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 67.4 bits (163), Expect = 6e-11
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 160 KQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKK---SEAPSGESRKFLKKMD 216
KQN E DE+A KN+ +SE SD +E + L+ K S+ SGE +K K
Sbjct: 1305 KQNEENPGDEEA-KNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEH 1363
Query: 217 DEDE-------DSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKA 269
E + SEDSED + ++G + S+SE+E+ +T R KKA + +
Sbjct: 1364 KEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRT----RSAKKAELEENQRSY 1419
Query: 270 AEKKREDKAKKKHDRKSKRLDEEEEEDNEGGEWE 303
+KK+ + K + D S+ EEE+ E E E
Sbjct: 1420 KQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEE 1453
Score = 47.8 bits (112), Expect = 5e-05
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 131 NKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDG 190
++N+ S+ QKI+ + ++S+ + S DE K+ + D+D D +
Sbjct: 1212 DQNSIGEGSSDEQKIKPVTENLV--LSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPEN 1269
Query: 191 VSAATFLKKKSEAPSGESRKFLKKMDDEDED--------SEDSEDDEDWDTGSTSSDSDS 242
A L ++ +A DDE E+ +E++ DE+ +S+SDS
Sbjct: 1270 RIAKKMLLEEIKANLSSDED--GSSDDEPEEGKKRTGKQNEENPGDEE-AKNQVNSESDS 1326
Query: 243 EEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKK----KHDRKSKRLDEEEEEDNE 298
+ EE K+ R L+ T + + EKK + K K ++ RK D E+ + E
Sbjct: 1327 DSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQE 1386
Query: 299 GGEWERV 305
G E V
Sbjct: 1387 SGVSEEV 1393
Score = 43.1 bits (100), Expect = 0.001
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 128 KKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDE--- 184
KK N S+ +K K D + H + K + E S+D DAE+ +E SS E
Sbjct: 838 KKRIPNTKDFDSSEDEKHSKKGMDNQGH-KNLKTSQEGSSD-DAERKQERETFSSAEGTV 895
Query: 185 DEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEE 244
D+D + L KK +A + S + K+ +++ E + +T S ++
Sbjct: 896 DKDTTIMELRDRLPKKQQASA--STDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKT 953
Query: 245 EEGKQTAL---ASRFLKKAP---TTDEDKKAAEKKREDKAKKKHDRKSK--RLDEEEEED 296
+ Q L A +FLKK T+++DKK ++K E+K KK D K K +++++ E
Sbjct: 954 CKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEK-KKPSDFKKKVIKMEQQYESS 1012
Query: 297 NEGGE 301
++G E
Sbjct: 1013 SDGTE 1017
Score = 41.6 bits (96), Expect = 0.003
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 122 EDKEGKKKMNKNNAKALSTLRQ-KIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG 180
ED++ + + A+ R K +K R + S +N S +E+ EK EE+ E
Sbjct: 1397 EDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEE 1456
Query: 181 SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS 240
+E+E+ED S++P G+ RK ++K+ +D+ T + +
Sbjct: 1457 EEEEEEEEDE-------NDDSKSP-GKGRKKIRKILKDDK-------------LRTETQN 1495
Query: 241 DSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNE 298
+EEE ++ +A R + +K + ED + K +K + +E+EE E
Sbjct: 1496 ALKEEEERRKRIAER------EREREKLREVIEIEDASPTKCPITTKLVLDEDEETKE 1547
Score = 41.2 bits (95), Expect = 0.004
Identities = 56/289 (19%), Positives = 113/289 (39%), Gaps = 31/289 (10%)
Query: 18 SGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEELTNLIRTIRNAMKIRDVT 77
SG+E ++K V P+ + +D++D R AK EE+ + + + +
Sbjct: 1245 SGDEALSKSV-------PVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPE 1297
Query: 78 KCLE-----------EFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNELWEDKEG 126
+ + + E + ++ S ++ PR+ R+L + E E
Sbjct: 1298 EGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDG--ESGEE 1355
Query: 127 KKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDE 186
KK K + + R+K+ + + +S + E S ED ++ S ++ +E
Sbjct: 1356 KKTKPKEHKEVKGRNRRKVSSEDSE-DSDFQESGVSEEVSESEDEQRPRTRSAKKAELEE 1414
Query: 187 DEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEE 246
++ KK+ E K + E+E+ E E++E+ + + EE+E
Sbjct: 1415 NQRSYKQK---KKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEE-----EEEEEEEEEDE 1466
Query: 247 GKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEE 295
+ + KK +D K + A K+ + + KR+ E E E
Sbjct: 1467 NDDSKSPGKGRKKIRKILKDDKL--RTETQNALKEEEERRKRIAERERE 1513
Score = 39.7 bits (91), Expect = 0.013
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 31/206 (15%)
Query: 114 EDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPE--------- 164
+D +E ED + + K K S ++K+ K + +ES ++ PE
Sbjct: 971 KDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQYESSSDGTEKLPEREEICHFPK 1030
Query: 165 -----QSADEDAEKNEEDSEGSSDEDEDE------------DGVSAATFLKKKSEAPSGE 207
++ D EK + + + +DE D ++ K K+ A E
Sbjct: 1031 GIKQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDSCDSSEDKKSKNGAYGRE 1090
Query: 208 SR--KFLKKMDDEDED--SEDSEDDEDWDTGSTSSDSDSEEEEGKQTA-LASRFLKKAPT 262
+ K L K + +D S D+E + G SSD + E ++ L+S+ K
Sbjct: 1091 KKRCKLLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQ 1150
Query: 263 TDEDKKAAEKKREDKAKKKHDRKSKR 288
+ AE+ ED KKK SK+
Sbjct: 1151 SGSSSSDAEESSEDNKKKKQRTSSKK 1176
Score = 38.9 bits (89), Expect = 0.022
Identities = 70/335 (20%), Positives = 122/335 (36%), Gaps = 44/335 (13%)
Query: 9 SDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEELTNL---IR 65
S+ + + S G E KP ++ K+ + + + E + ++ EE+ + I+
Sbjct: 978 SEDDKKQSKKGTEEKKKP--SDFKKKVIKMEQQYESSSDGTEKLPER--EEICHFPKGIK 1033
Query: 66 TIRN--------AMKIRDVT--KCLEEFELLGKAYGKAKSIVDKE---------GVPRFY 106
I+N + KIRD T K E + K+ GK S E G +
Sbjct: 1034 QIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDSCDSSEDKKSKNGAYGREKKR 1093
Query: 107 IRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQS 166
++L + K M ++ + ++I R S + K+ S
Sbjct: 1094 CKLLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQSGS 1153
Query: 167 ADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSE 226
+ DAE++ ED++ + A +K+K S K K+ D S D E
Sbjct: 1154 SSSDAEESSEDNKKKKQRTSSK---KKAVIVKEKKRNSLRTSTK-RKQADITSSSSSDIE 1209
Query: 227 DDEDWDTGSTSSDSDSEEEEGKQTALASR-----------FLKKAPTT---DEDKKAAEK 272
DD+ G SSD + + L+S K P T D+D E
Sbjct: 1210 DDDQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPEN 1269
Query: 273 KREDKAKKKHDRKSKRLDEEEEEDNEGGEWERVRG 307
+ K + + + DE+ D+E E ++ G
Sbjct: 1270 RIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTG 1304
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 62.8 bits (151), Expect = 1e-09
Identities = 63/219 (28%), Positives = 90/219 (41%), Gaps = 52/219 (23%)
Query: 113 LEDYLNE---LWED--------KEGKK-------KMNKNNAKALSTLRQKIRKYNRDFES 154
++DYLN WE+ K G K KMN+N K L R+K+ N
Sbjct: 30 IQDYLNRPRPTWEEVKKQLENKKTGSKALAEFEEKMNENWKKELEKSREKLLSGNESSSK 89
Query: 155 HITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKK-------------S 201
K+ ++S + + DS SS + EDE+ KKK S
Sbjct: 90 KRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHES 149
Query: 202 EAPSGESRKFLKKMDDEDEDSED----------SEDDEDWDTGSTSSDSDSEEEEGKQTA 251
E+ S ES K KK DE E +D S D+ + +SS+SD EE+
Sbjct: 150 ESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQ---- 205
Query: 252 LASRFLKKAPTTDEDKKAAE--KKREDKAKKKHDRKSKR 288
KK +E ++A E KK++ K KKH +K K+
Sbjct: 206 -----AKKKRRCEEREQAKEKVKKKKKKQHKKHSKKKKK 239
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 62.0 bits (149), Expect = 2e-09
Identities = 48/197 (24%), Positives = 96/197 (48%), Gaps = 24/197 (12%)
Query: 124 KEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEK--NEEDSEGS 181
KE KKK KN+ + ++ N++ E + K++ E +++++++ +E+ SE
Sbjct: 501 KESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDG 560
Query: 182 SDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGS------ 235
S+ + +E+G+ +K G ++ + + D++ + DSE+ E D GS
Sbjct: 561 SEREFEENGL-------EKDLDEEGSEKELHENVLDKELEENDSENSEFEDDGSEKVLDE 613
Query: 236 ----TSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKRE--DKAKKKHDRKSK-- 287
D DS+E+E ++ F ++ ++++ A EK E DK ++ D K
Sbjct: 614 EGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLF 673
Query: 288 -RLDEEEEEDNEGGEWE 303
D++E+ED +G E E
Sbjct: 674 EESDDKEDEDADGKEVE 690
Score = 49.7 bits (117), Expect = 1e-05
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 114 EDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYN-----RDFESHITSYKQNPEQSAD 168
ED LN+ E++ G K ++ + + K + R+FE + + E S
Sbjct: 522 EDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEK 581
Query: 169 E------DAEKNEEDSEGSSDEDE------DEDGVSAATFLKKKSEAPSGESRKFLKKMD 216
E D E E DSE S ED+ DE+G + + S+ E + K D
Sbjct: 582 ELHENVLDKELEENDSENSEFEDDGSEKVLDEEG--SEREFDEDSDEKEEEEDTYEKVFD 639
Query: 217 DEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKRED 276
DE ++ ED E + + G ++D +EE + + F + DED E + D
Sbjct: 640 DESDEKEDEEYAD--EKGLEAADKKAEEGDADE----KLFEESDDKEDEDADGKEVEDAD 693
Query: 277 KAKKKHDRKSKRLDEEEEEDNE----GGEWERVRGGVPLVKEKP 316
+ + D +++L +EEE+ +E + GG V+E P
Sbjct: 694 EKLFEDDDSNEKLFDEEEDSSEKLFDDSDERGTLGGFGSVEEGP 737
Score = 46.2 bits (108), Expect = 1e-04
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 160 KQNPEQSADEDAEKNEEDS-------EGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFL 212
+ +PE+ A+E + E + EGS + E E+G + ++P ES+K
Sbjct: 451 ESSPEKEAEEGCPEKESEEGCPKRGFEGSCSQKESEEGNPVRG---SEEDSPKKESKKKT 507
Query: 213 KKMDDEDED-SEDSEDD----EDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDK 267
K D E+ +++SEDD + + G T + + E+ + + + + ++
Sbjct: 508 LKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEE 567
Query: 268 KAAEKKREDKAKKKHDRKSKRLDEEEEEDNEGGEWE 303
EK +++ +K ++ E EE D+E E+E
Sbjct: 568 NGLEKDLDEEGSEKELHENVLDKELEENDSENSEFE 603
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 62.0 bits (149), Expect = 2e-09
Identities = 48/197 (24%), Positives = 96/197 (48%), Gaps = 24/197 (12%)
Query: 124 KEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEK--NEEDSEGS 181
KE KKK KN+ + ++ N++ E + K++ E +++++++ +E+ SE
Sbjct: 501 KESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDG 560
Query: 182 SDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGS------ 235
S+ + +E+G+ +K G ++ + + D++ + DSE+ E D GS
Sbjct: 561 SEREFEENGL-------EKDLDEEGSEKELHENVLDKELEENDSENSEFEDDGSEKVLDE 613
Query: 236 ----TSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKRE--DKAKKKHDRKSK-- 287
D DS+E+E ++ F ++ ++++ A EK E DK ++ D K
Sbjct: 614 EGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLF 673
Query: 288 -RLDEEEEEDNEGGEWE 303
D++E+ED +G E E
Sbjct: 674 EESDDKEDEDADGKEVE 690
Score = 49.7 bits (117), Expect = 1e-05
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 114 EDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYN-----RDFESHITSYKQNPEQSAD 168
ED LN+ E++ G K ++ + + K + R+FE + + E S
Sbjct: 522 EDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEK 581
Query: 169 E------DAEKNEEDSEGSSDEDE------DEDGVSAATFLKKKSEAPSGESRKFLKKMD 216
E D E E DSE S ED+ DE+G + + S+ E + K D
Sbjct: 582 ELHENVLDKELEENDSENSEFEDDGSEKVLDEEG--SEREFDEDSDEKEEEEDTYEKVFD 639
Query: 217 DEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKRED 276
DE ++ ED E + + G ++D +EE + + F + DED E + D
Sbjct: 640 DESDEKEDEEYAD--EKGLEAADKKAEEGDADE----KLFEESDDKEDEDADGKEVEDAD 693
Query: 277 KAKKKHDRKSKRLDEEEEEDNE----GGEWERVRGGVPLVKEKP 316
+ + D +++L +EEE+ +E + GG V+E P
Sbjct: 694 EKLFEDDDSNEKLFDEEEDSSEKLFDDSDERGTLGGFGSVEEGP 737
Score = 46.2 bits (108), Expect = 1e-04
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 160 KQNPEQSADEDAEKNEEDS-------EGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFL 212
+ +PE+ A+E + E + EGS + E E+G + ++P ES+K
Sbjct: 451 ESSPEKEAEEGCPEKESEEGCPKRGFEGSCSQKESEEGNPVRG---SEEDSPKKESKKKT 507
Query: 213 KKMDDEDED-SEDSEDD----EDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDK 267
K D E+ +++SEDD + + G T + + E+ + + + + ++
Sbjct: 508 LKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEE 567
Query: 268 KAAEKKREDKAKKKHDRKSKRLDEEEEEDNEGGEWE 303
EK +++ +K ++ E EE D+E E+E
Sbjct: 568 NGLEKDLDEEGSEKELHENVLDKELEENDSENSEFE 603
>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
Length = 237
Score = 61.2 bits (147), Expect = 4e-09
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 108 RILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSA 167
+ LA+ E+ +NE W KK++ K+ K LS +K R K+ +
Sbjct: 46 KALAEFEEKMNENW-----KKELEKHREKLLSGSESSSKKRQR-------KKKEKKKSGR 93
Query: 168 DEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEA-PSGESRKFLKKMDDEDEDSEDSE 226
+ + DS SS + EDED KKK+ + S ES M + + DS+DS
Sbjct: 94 YSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSES-----SMSETESDSKDSL 148
Query: 227 DDEDWDTGSTSSDSD-----------SEEEEGKQTALA-SRFL-----KKAPTTDEDKKA 269
+ T + D SE++ +L+ S ++ KK +++E +KA
Sbjct: 149 KKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKA 208
Query: 270 AEKKREDKAKKKHDRKSKRLDEEEEEDN 297
EK ++ K KKH +K K+ D+
Sbjct: 209 TEKTKKKKKHKKHSKKKKKKAASSSPDS 236
>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
Length = 247
Score = 61.2 bits (147), Expect = 4e-09
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 108 RILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSA 167
+ LA+ E+ +NE W KK++ K+ K LS +K R K+ +
Sbjct: 56 KALAEFEEKMNENW-----KKELEKHREKLLSGSESSSKKRQR-------KKKEKKKSGR 103
Query: 168 DEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEA-PSGESRKFLKKMDDEDEDSEDSE 226
+ + DS SS + EDED KKK+ + S ES M + + DS+DS
Sbjct: 104 YSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSES-----SMSETESDSKDSL 158
Query: 227 DDEDWDTGSTSSDSD-----------SEEEEGKQTALA-SRFL-----KKAPTTDEDKKA 269
+ T + D SE++ +L+ S ++ KK +++E +KA
Sbjct: 159 KKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKA 218
Query: 270 AEKKREDKAKKKHDRKSKRLDEEEEEDN 297
EK ++ K KKH +K K+ D+
Sbjct: 219 TEKTKKKKKHKKHSKKKKKKAASSSPDS 246
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 59.3 bits (142), Expect = 2e-08
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 41/252 (16%)
Query: 128 KKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDED 187
+ ++NN+K S K KY + + E +DA+K+ + + + +D+
Sbjct: 266 RNYSQNNSKNYSL---KYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDK 322
Query: 188 EDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEG 247
+ V T + ++A SG+S+ ++ D + + + +DD+ DT +D+E +
Sbjct: 323 KKDVKKDT---ESTDAESGDSKD--ERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDA 377
Query: 248 KQTALASRFLKKAPTTDEDKKAAEK---------------------------KREDKAKK 280
K SR LKKA D+ KK A+K K ++K
Sbjct: 378 KDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSV 437
Query: 281 KHDRKSKRLDEEEEEDNEGGEWERVRGGVPLVKEKPKMFAK----GTEITHAVVIKKLNE 336
K+D +S D E + D++ G+ + +G K+ K AK TE+ + +KK +
Sbjct: 438 KNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKK--D 495
Query: 337 ILQARGKKGTDR 348
++ KKG+ +
Sbjct: 496 KKHSKEKKGSKK 507
Score = 53.5 bits (127), Expect = 9e-07
Identities = 80/320 (25%), Positives = 128/320 (40%), Gaps = 50/320 (15%)
Query: 10 DSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRS-------AKDKRFEELTN 62
D+ES + SG+ + K+ L + ++DTK+ S AKD R + N
Sbjct: 329 DTESTDAESGDSKDERK-DTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDAR-NDSRN 386
Query: 63 LIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNELWE 122
L + +N K +D K + + K +K+ D +D
Sbjct: 387 LKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKK-----------DKKD------- 428
Query: 123 DKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSS 182
K KK KN+ ++ + + + K + + +DA+KN E +E S
Sbjct: 429 SKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMES 488
Query: 183 DEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSS---- 238
D + +D KK S+ G S+K +KK +D +S D+E DE TG +S
Sbjct: 489 DLELKKD--------KKHSKEKKG-SKKDIKKDARKDTESTDAEFDESSKTGFKTSTKIK 539
Query: 239 DSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNE 298
SD+E EE A K + D +A K E K + R+ ++ NE
Sbjct: 540 GSDTESEESLYKPGA-----KKKIDESDGTSANSKMEGLESK----RGFRMSSKKTTFNE 590
Query: 299 GGEWERVRGGVPLVKEKPKM 318
GE + G VP +EKP +
Sbjct: 591 KGE-KASTGRVPPSREKPPL 609
Score = 37.0 bits (84), Expect = 0.084
Identities = 36/180 (20%), Positives = 74/180 (41%), Gaps = 19/180 (10%)
Query: 123 DKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSS 182
+ + K ++KN ++ + +K N +F + K++ ++S + +E SE S
Sbjct: 184 ESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSL 243
Query: 183 DED-------EDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGS 235
+ D D++ ++ +L+ S+ S K +D +
Sbjct: 244 NVDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKK------------N 291
Query: 236 TSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEE 295
SD+E E+ K S+ +KK D+ KK +K E + D K +R D ++++
Sbjct: 292 AKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDK 351
>gi|11225260 DNA topoisomerase I [Homo sapiens]
Length = 765
Score = 57.8 bits (138), Expect = 5e-08
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 23/191 (12%)
Query: 122 EDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGS 181
+D+E K N + + ++K + ++D S +++ ++ D D EK +E+ +
Sbjct: 42 KDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSS-----EKHKDKHKDRDKEKRKEEKVRA 96
Query: 182 SDE----DEDEDGVSAATFLKKKSE-----APSGESRKFLKKMDDEDEDSEDSEDDEDWD 232
S + E E+G S+ +K + E P E K LK+ DED+ + + D
Sbjct: 97 SGDAKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYKPKKIKTED 156
Query: 233 TGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEE 292
T EEE+GK LKK D+DKK E + K KK + + + EE
Sbjct: 157 TKKEKKRKLEEEEDGK--------LKKPKNKDKDKKVPEPDNKKKKPKKEEEQKWKWWEE 208
Query: 293 EEEDNEGGEWE 303
E EG +W+
Sbjct: 209 ERYP-EGIKWK 218
Score = 37.4 bits (85), Expect = 0.064
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 219 DEDSEDSEDDEDWDTGSTSSDSDS--EEEEGKQTALASRFLKKAPTTDEDKKAAEKKRED 276
D DS+ + D+ + D + E + + +K+ ++ + K +EKK ++
Sbjct: 4 DHLHNDSQIEADFRLNDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKE 63
Query: 277 KAKKKHDRKS--KRLDEEEEEDNEGGEWERVR--GGVPLVKEKPKMFAKGTEI 325
K K KH S K D+ ++ D E + E+VR G + KEK F+ +I
Sbjct: 64 KEKTKHKDGSSEKHKDKHKDRDKEKRKEEKVRASGDAKIKKEKENGFSSPPQI 116
Score = 34.7 bits (78), Expect = 0.42
Identities = 36/164 (21%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Query: 151 DFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRK 210
D H +K + + K E+D E S + + K+K++ G S K
Sbjct: 20 DSHKHKDKHKDREHRHKEH---KKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEK 76
Query: 211 FLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALAS-RFLKKAPTTD----- 264
K D D++ E + D++ ++ K+ +S +K P D
Sbjct: 77 HKDKHKDRDKEKRKEE--------KVRASGDAKIKKEKENGFSSPPQIKDEPEDDGYFVP 128
Query: 265 --EDKKAAEKKRED--------KAKKKHDRKSKRLDEEEEEDNE 298
ED K ++ R++ K K + +K K+ EEEED +
Sbjct: 129 PKEDIKPLKRPRDEDDADYKPKKIKTEDTKKEKKRKLEEEEDGK 172
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 56.6 bits (135), Expect = 1e-07
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 17/157 (10%)
Query: 159 YKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDE 218
+KQ PE D D E ED+E +D + + +KK + E + K+ D
Sbjct: 323 HKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMD-----RKKFHSSDSEEEEHKKQKMDS 377
Query: 219 DEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDED----------KK 268
DED ++ E +E + SDSE+EE K +A SR + A +D D K
Sbjct: 378 DEDEKEGE-EEKVAKRKAAVLSDSEDEE-KASAKKSRVVSDADDSDSDAVSDKSGKREKT 435
Query: 269 AAEKKREDKAKKKHDRKSKRLDEEEEEDNEGGEWERV 305
A E+ K+ D+K++ D + G E E +
Sbjct: 436 IASDSEEEAGKELSDKKNEEKDLFGSDSESGNEEENL 472
Score = 46.6 bits (109), Expect = 1e-04
Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 153 ESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFL 212
+SH+ K + S +E+ +K + DS+ E E+E + SE S K
Sbjct: 352 DSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKS 411
Query: 213 KKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEK 272
+ + D D+ D+ D+ T + SDSEEE GK+ + K +D + E+
Sbjct: 412 RVVSDADDSDSDAVSDKSGKREKTIA-SDSEEEAGKELSDKKNEEKDLFGSDSESGNEEE 470
Query: 273 ---------------------KREDKAKKKHDRKSKRLDEEEEEDN--EGGEWERVRGGV 309
+ED ++K + + K ++ + +DN G + +
Sbjct: 471 NLIADIFGESGDEEEEEFTGFNQEDLEEEKGETQVKEAEDSDSDDNIKRGKHMDFLSDFE 530
Query: 310 PLVKEKPKMFAK-------GTEITHA-----VVIKKLNEILQARGKKGTDRAAQIELLQL 357
+++ K M K GT I+ A +I K+NE + + + ++ L L
Sbjct: 531 MMLQRKKSMSGKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQLNNQKKPALKKLTL 590
Query: 358 L 358
L
Sbjct: 591 L 591
Score = 46.2 bits (108), Expect = 1e-04
Identities = 44/177 (24%), Positives = 68/177 (38%), Gaps = 35/177 (19%)
Query: 149 NRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPS--- 205
+ D H S +N E ++ ED + D + + + +SE P
Sbjct: 252 SEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGP 311
Query: 206 -------GESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSD----------SDSEEEEGK 248
SR K D+D D E+ +D + S SD SDSEEEE K
Sbjct: 312 ASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHK 371
Query: 249 QTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNEGGEWERV 305
K+ +DED+K E+++ K RK+ L + E+E+ + RV
Sbjct: 372 ---------KQKMDSDEDEKEGEEEKVAK------RKAAVLSDSEDEEKASAKKSRV 413
Score = 37.0 bits (84), Expect = 0.084
Identities = 41/178 (23%), Positives = 69/178 (38%), Gaps = 30/178 (16%)
Query: 170 DAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDE 229
D+E +E + +SD + +E ++K E R D E+ED D
Sbjct: 68 DSENDEPLNLNASDSESEE-------LHRQKDSDSESEERAEPPASDSENEDVNQHGSDS 120
Query: 230 DWDTGSTSSDSDSEEEE--------------GKQTALASRF--LKKAPTTDEDKKAAEKK 273
+ + SDSE EE GK A S L+K+P +D + + A K
Sbjct: 121 ESEETRKLPGSDSENEELLNGHASDSENEDVGKHPASDSEIEELQKSPASDSETEDALKP 180
Query: 274 REDKAKKKHDRKSKRLDEEEEE-------DNEGGEWERVRGGVPLVKEKPKMFAKGTE 324
+ ++ + + + D E EE D+E E + + +E P+ A +E
Sbjct: 181 QISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSE 238
Score = 35.4 bits (80), Expect = 0.24
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 9/144 (6%)
Query: 153 ESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFL 212
+S S Q+ + A ++ + S+G D +E G + +++ SE + + L
Sbjct: 2 DSEYYSGDQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGS-VERHSENETSDREDGL 60
Query: 213 KKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEE-EEGKQTALASRFLKKAPTTDEDKKAAE 271
K DSE+DE + + SDS+SEE K + S + P +D + +
Sbjct: 61 PK----GHHVTDSENDEPLNLNA--SDSESEELHRQKDSDSESEERAEPPASDSENEDVN 114
Query: 272 KKREDKAKKKHDRKSKRLDEEEEE 295
+ D ++ + RK D E EE
Sbjct: 115 QHGSD-SESEETRKLPGSDSENEE 137
Score = 35.0 bits (79), Expect = 0.32
Identities = 41/191 (21%), Positives = 82/191 (42%), Gaps = 24/191 (12%)
Query: 98 DKEGVPRFYIRILADLEDYLNELWEDKEGKKK---MNKNNAKALSTLRQKIRKYNRDFES 154
D+E R+++D +D ++ DK GK++ + + +A L K + F S
Sbjct: 402 DEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSEEEAGKELSDKKNEEKDLFGS 461
Query: 155 HITSYKQNPEQSAD---EDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKF 211
S + AD E ++ EE+ G + ED +E+ T +K+ ++ S ++ K
Sbjct: 462 DSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEE--KGETQVKEAEDSDSDDNIKR 519
Query: 212 LKKMDD--------EDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTT 263
K MD + + S + + D G+ SD+D +++ +K
Sbjct: 520 GKHMDFLSDFEMMLQRKKSMSGKRRRNRDGGTFISDADD--------VVSAMIVKMNEAA 571
Query: 264 DEDKKAAEKKR 274
+ED++ +K+
Sbjct: 572 EEDRQLNNQKK 582
Score = 33.9 bits (76), Expect = 0.71
Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 26/224 (11%)
Query: 99 KEGVPRFYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQK---IRKYNRDFESH 155
++G+P+ + ++ ++ LN D E ++ + ++ + S R + N D H
Sbjct: 57 EDGLPKGHHVTDSENDEPLNLNASDSESEELHRQKDSDSESEERAEPPASDSENEDVNQH 116
Query: 156 ITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDED-GVSAATFLK----KKSEAPSGESRK 210
+ + + +NEE G + + E+ED G A+ + +KS A E+
Sbjct: 117 GSDSESEETRKLPGSDSENEELLNGHASDSENEDVGKHPASDSEIEELQKSPASDSETED 176
Query: 211 FLKKMDDEDEDSE-------DSEDDED-----WDTGSTS------SDSDSEEEEGKQTAL 252
LK + E E DSE++E D+ S SDS+SEE Q +
Sbjct: 177 ALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASD 236
Query: 253 ASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEED 296
+ P + + + + + + R+ + E ED
Sbjct: 237 SENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESED 280
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 56.2 bits (134), Expect = 1e-07
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 40/249 (16%)
Query: 38 LSEDEEDTKRVVRSAKDKRFEE-LTNLIRTIRNAMKIRDVTKCLEEF-----ELLGKAYG 91
L+ T+++ R DK+ EE + + + +++ R++ + E ++ +
Sbjct: 99 LANGRHFTRQLARQQADKKKEEHREDKVIPVTRSLRARNIVQSTEHLHEDNGDVEVRRSC 158
Query: 92 KAKSIVDKEGVPRFYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRD 151
+ +S + +++ + + + + +D KKM + + L L +N
Sbjct: 159 RIRSRYSGVNQSMLFDKLITNTAEAVLQKMDDM---KKMRRQRMRELEDLGV----FNET 211
Query: 152 FESHITSY---KQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGES 208
ES++ Y KQ Q DE+ N+E S SS+E ED++ GE
Sbjct: 212 EESNLNMYTRGKQKDIQRTDEETTDNQEGSVESSEEGEDQE------------HEDDGED 259
Query: 209 RKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKK 268
DDED+D +D +DD+D D + D +EE+G++ +L++ T +
Sbjct: 260 E------DDEDDDDDDDDDDDDDD------EDDEDEEDGEEENQKRYYLRQRKATVYYQA 307
Query: 269 AAEKKREDK 277
EK R +
Sbjct: 308 PLEKPRHQR 316
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 56.2 bits (134), Expect = 1e-07
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 44/148 (29%)
Query: 154 SHITSYKQNPEQSADEDAE-----KNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGES 208
+++ Y + +++ D DAE + EED EG +EDED++ GE
Sbjct: 143 TYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDE---------------DGEE 187
Query: 209 RKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKK 268
+F D+ED++ ED E DED D S+ EEE G DE+ +
Sbjct: 188 EEF----DEEDDEDEDVEGDEDDD-----EVSEEEEEFG---------------LDEEDE 223
Query: 269 AAEKKREDKAKKKHDRKSKRLDEEEEED 296
++ E++ K +++ + D+E E+D
Sbjct: 224 DEDEDEEEEEGGKGEKRKRETDDEGEDD 251
Score = 41.6 bits (96), Expect = 0.003
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 17/107 (15%)
Query: 198 KKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFL 257
++ EAP ++ + +D+E+ED E+ ED+ED D D D EEEE + +
Sbjct: 150 REDQEAPDSDAE--VDGVDEEEED-EEGEDEEDED------DEDGEEEEFDEEDDEDEDV 200
Query: 258 KKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNEGGEWER 304
+ DED ++ E+ + D ++E+EE+ EGG+ E+
Sbjct: 201 E----GDEDDDEVSEEEEEFGLDEEDED----EDEDEEEEEGGKGEK 239
Score = 32.3 bits (72), Expect = 2.1
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 211 FLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAA 270
+L D ED+++ DS+ + D D + E+EEG+ + DE+
Sbjct: 144 YLDGYDREDQEAPDSDAEVD------GVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDED 197
Query: 271 E--KKREDKAKKKHDRKSKRLDEEEEEDNEGGEWE 303
E + ED + + + LDEE+E+++E E E
Sbjct: 198 EDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEE 232
Score = 32.0 bits (71), Expect = 2.7
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 19/107 (17%)
Query: 115 DYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKN 174
D ++E ED+EG+ + ++++ ++ D E ++ ++ ++E+ E
Sbjct: 163 DGVDEEEEDEEGEDEEDEDDEDG-----EEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFG 217
Query: 175 EEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDED 221
++ + DEDE+E+ E GE RK ++ DDE ED
Sbjct: 218 LDEEDEDEDEDEEEE------------EGGKGEKRK--RETDDEGED 250
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 55.8 bits (133), Expect = 2e-07
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 128 KKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDED 187
K +N+AK K + + E S + +S E E+ E EG S+ED
Sbjct: 665 KAKQENSAK-------KFYSESEEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSS 717
Query: 188 EDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEG 247
ED S +S SG K K + + + DSED E + S +SDS ++E
Sbjct: 718 EDSSSEQD---SESGRESGLENKRTAKRNSKAKGKSDSEDGEKENEKSKTSDSSNDESSS 774
Query: 248 KQTALASRFLKKAPTTDEDKKAAEKKREDKAKK 280
+ + + + P ++ + + K++E K K+
Sbjct: 775 IEDSSSDSESESEPESESESRRVTKEKEKKTKQ 807
Score = 45.1 bits (105), Expect = 3e-04
Identities = 26/132 (19%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 182 SDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTS---- 237
S+ +E+ED +++ + +S + SGE + ++ D ++ SEDS ++D ++G S
Sbjct: 677 SESEEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLEN 736
Query: 238 -------------SDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDR 284
SDS+ E+E +++ + ++ + ++ +E + E +++ + R
Sbjct: 737 KRTAKRNSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRR 796
Query: 285 KSKRLDEEEEED 296
+K +++ ++D
Sbjct: 797 VTKEKEKKTKQD 808
Score = 41.6 bits (96), Expect = 0.003
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 202 EAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAP 261
+A S K +E+EDS DS D + ++GS S + EEG +S
Sbjct: 665 KAKQENSAKKFYSESEEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQ 724
Query: 262 TTDEDKKAA-EKKREDKAKKKHDRKSKRLDEEEEEDNE 298
++ +++ E KR AK+ K K E+ E++NE
Sbjct: 725 DSESGRESGLENKR--TAKRNSKAKGKSDSEDGEKENE 760
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 55.8 bits (133), Expect = 2e-07
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 122 EDKEGKKKMNKNNAKALSTLRQKIRKYNRD-FESHITSYKQNPEQSADEDAEKNEEDSEG 180
+D+ K+ N K+++ LR K +R +S S + + E DED ++ EED E
Sbjct: 603 QDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDEN 662
Query: 181 SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS 240
D EDG ++ + E+ + + DD+++D ED +++ + + S+SS
Sbjct: 663 G---DSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 719
Query: 241 DSEEEE 246
DS + +
Sbjct: 720 DSSDSD 725
Score = 43.9 bits (102), Expect = 7e-04
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 208 SRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDK 267
SR L+ + +ED E+ EDDED D ++ E+G ++ +S + DE +
Sbjct: 630 SRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESS-------SEDESE 682
Query: 268 KAAEKKREDKAKKKHDRKSKRLDEEEEEDNE 298
E + +D+ + + D++E+EDNE
Sbjct: 683 DGDENEEDDEDEDDDE------DDDEDEDNE 707
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 55.8 bits (133), Expect = 2e-07
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 122 EDKEGKKKMNKNNAKALSTLRQKIRKYNRD-FESHITSYKQNPEQSADEDAEKNEEDSEG 180
+D+ K+ N K+++ LR K +R +S S + + E DED ++ EED E
Sbjct: 603 QDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDEN 662
Query: 181 SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS 240
D EDG ++ + E+ + + DD+++D ED +++ + + S+SS
Sbjct: 663 G---DSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 719
Query: 241 DSEEEE 246
DS + +
Sbjct: 720 DSSDSD 725
Score = 43.9 bits (102), Expect = 7e-04
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 208 SRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDK 267
SR L+ + +ED E+ EDDED D ++ E+G ++ +S + DE +
Sbjct: 630 SRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESS-------SEDESE 682
Query: 268 KAAEKKREDKAKKKHDRKSKRLDEEEEEDNE 298
E + +D+ + + D++E+EDNE
Sbjct: 683 DGDENEEDDEDEDDDE------DDDEDEDNE 707
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 55.8 bits (133), Expect = 2e-07
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 122 EDKEGKKKMNKNNAKALSTLRQKIRKYNRD-FESHITSYKQNPEQSADEDAEKNEEDSEG 180
+D+ K+ N K+++ LR K +R +S S + + E DED ++ EED E
Sbjct: 640 QDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDEN 699
Query: 181 SSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDS 240
D EDG ++ + E+ + + DD+++D ED +++ + + S+SS
Sbjct: 700 G---DSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 756
Query: 241 DSEEEE 246
DS + +
Sbjct: 757 DSSDSD 762
Score = 43.9 bits (102), Expect = 7e-04
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 208 SRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDK 267
SR L+ + +ED E+ EDDED D ++ E+G ++ +S + DE +
Sbjct: 667 SRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESS-------SEDESE 719
Query: 268 KAAEKKREDKAKKKHDRKSKRLDEEEEEDNE 298
E + +D+ + + D++E+EDNE
Sbjct: 720 DGDENEEDDEDEDDDE------DDDEDEDNE 744
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 55.5 bits (132), Expect = 2e-07
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 160 KQNPEQSADEDAEKNEEDSEGSSDED--EDEDGVSAATFLKKKSEAPSGESRKFLKKMDD 217
K++ E +E E +ED + +ED ED++G K+K + GE K +D
Sbjct: 131 KEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGK--GNGED 188
Query: 218 EDEDSEDSEDDEDW-DTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKRED 276
E ED +++ED +TG + D +E+ K+ + + ++ K+ E+
Sbjct: 189 GKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEE 248
Query: 277 KAKKKHDRKSKRLDEEEEEDNE 298
K+K D K + +EE+E E
Sbjct: 249 AGKEKEDLKEEEEGKEEDEIKE 270
Score = 50.4 bits (119), Expect = 7e-06
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 173 KNEEDSEGSSDEDEDED-GVSAATFLKKKSEAPSGESRKFLKKMDD--EDEDSEDSEDDE 229
KNEE+ + +ED++E+ G + +K E E + +K +D E ED + ED +
Sbjct: 124 KNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGK 183
Query: 230 -DWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKR 288
+ + G + + EEE+ K+T ++ K+ +KK K K D K +
Sbjct: 184 GNGEDGKEKGEDEKEEEDRKETG-------DGKENEDGKEKGDKKEGKDVKVKEDEKERE 236
Query: 289 LDEEEEEDNE 298
+E+E NE
Sbjct: 237 DGKEDEGGNE 246
Score = 46.2 bits (108), Expect = 1e-04
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 160 KQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDED 219
++N E + ++ EK E + +E+ED+ K+ E E + K D ++
Sbjct: 102 EENIEDATEKGGEKKEAVAAEVKNEEEDQ----------KEDEEDQNEEKGEAGKEDKDE 151
Query: 220 EDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKRE---- 275
+ ED ++D++ G+ + E+E+GK+ + ED+K E ++E
Sbjct: 152 KGEEDGKEDKN---GNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDG 208
Query: 276 ---DKAKKKHDRK-----SKRLDEEEEED---NEGGEWE 303
+ K+K D+K + DE+E ED +EGG E
Sbjct: 209 KENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEE 247
Score = 42.4 bits (98), Expect = 0.002
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 6/138 (4%)
Query: 164 EQSADEDAEKNEEDSEGSSDE-DEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDS 222
E +ED +N ++ E E E + + G +K + ++E+
Sbjct: 69 EAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEE 128
Query: 223 EDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAE--KKREDKAKK 280
+ ED+ED + + + ++E+G++ K ED K E KK ED
Sbjct: 129 DQKEDEEDQNEEKGEAGKEDKDEKGEEDGKED---KNGNEKGEDAKEKEDGKKGEDGKGN 185
Query: 281 KHDRKSKRLDEEEEEDNE 298
D K K DE+EEED +
Sbjct: 186 GEDGKEKGEDEKEEEDRK 203
Score = 35.0 bits (79), Expect = 0.32
Identities = 37/180 (20%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 122 EDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGS 181
E K +++ ++ K +R ++ ++N + SA AE +E
Sbjct: 15 EPKRRSARLSAMLVPVTPEVKPKRTSSSRKMKTKSDMMEENIDTSAQAVAETKQE---AV 71
Query: 182 SDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSD 241
+ED +E+ + K +EAP+ E + ++ ++E+ ED+ + + +++
Sbjct: 72 VEEDYNENAKNGEA---KITEAPASEK----EIVEVKEENIEDATEKGGEKKEAVAAEVK 124
Query: 242 SEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNEGGE 301
+EEE+ K+ D++++ E +EDK D K + +E++ NE GE
Sbjct: 125 NEEEDQKEDE-----------EDQNEEKGEAGKEDK-----DEKGEEDGKEDKNGNEKGE 168
Score = 30.4 bits (67), Expect = 7.9
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 122 EDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGS 181
E+++GK+K +K K + K+++ ++ E N E++ E + EE+
Sbjct: 210 ENEDGKEKGDKKEGKDV-----KVKEDEKEREDGKEDEGGNEEEAGKEKEDLKEEEEGKE 264
Query: 182 SDEDEDEDG 190
DE +++DG
Sbjct: 265 EDEIKEDDG 273
>gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]
Length = 681
Score = 54.7 bits (130), Expect = 4e-07
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 27/193 (13%)
Query: 111 ADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADED 170
+DL+ +++L + + + K + + S + K K + + E+++ + ++ E+ D D
Sbjct: 171 SDLDFDISKLEQQSKVQNK-GQGKPREKSIVDDKFFKLS-EMEAYLENIEKEEERKDDND 228
Query: 171 AEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMD--DEDEDSEDSEDD 228
E+ + D D DEDE G+ + LK SG+S + LK D D E ED +
Sbjct: 229 EEEEDIDFFEDIDSDEDEGGLFGSKKLK------SGKSSRNLKYKDFFDPVESDEDITNV 282
Query: 229 EDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKR 288
D + S D + EEE ++ +++ TDED + +E++ K+H KR
Sbjct: 283 HDDELDSNKEDDEIAEEEAEELSISE--------TDED----DDLQENEDNKQHKESLKR 330
Query: 289 L-----DEEEEED 296
+ D+ E ED
Sbjct: 331 VTFALPDDAETED 343
Score = 35.0 bits (79), Expect = 0.32
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 36/243 (14%)
Query: 74 RDVTKCLEEFELLGKAYGKAKSIVD-KEGVPRFYIRILADLEDY---------------- 116
R + +CL E +GKA G+ + + +EG+ + + L D+
Sbjct: 9 RTLERCLTE---VGKATGRPECFLTIQEGLASKFTSLTKVLYDFNKILENGRIHGSPLQK 65
Query: 117 -LNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNE 175
+ E ++D++ +++ N L + + + D + I+ ++ EQ +ED + E
Sbjct: 66 LVIENFDDEQIWQQLELQNEPILQYFQNAVSETINDED--ISLLPESEEQEREEDGSEIE 123
Query: 176 EDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMD-DEDEDSEDSEDDEDWDTG 234
D + ++ E+E+ + E S+ L+K DEDS D D+D
Sbjct: 124 ADDKEDLEDLEEEEVSDMGNDDPEMGERAENSSKSDLRKSPVFSDEDS-----DLDFDI- 177
Query: 235 STSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKRE-DKAKKKHDRKSKRLDEEE 293
S E++ Q + +K+ D+ K +E + + +K+ +RK +EEE
Sbjct: 178 -----SKLEQQSKVQNKGQGKPREKSIVDDKFFKLSEMEAYLENIEKEEERKDDNDEEEE 232
Query: 294 EED 296
+ D
Sbjct: 233 DID 235
>gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 2 [Homo sapiens]
Length = 227
Score = 54.7 bits (130), Expect = 4e-07
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 15/173 (8%)
Query: 128 KKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEE-DSEGSSDEDE 186
+K N N K+L +I D+ I Q D E NE DSE DED
Sbjct: 67 RKQNLKNLKSLDLFNCEITNLE-DYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDEDG 125
Query: 187 DEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEE 246
DED +++ E +G + ++E+E+ E+ ++DED D S+ EEE
Sbjct: 126 DEDD-------EEEEENEAGPPEGY----EEEEEEEEEEDEDEDEDEDEAGSELGEGEEE 174
Query: 247 GKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKR--LDEEEEEDN 297
+ L ++ D+ + E++ E++ K KR D+ EEED+
Sbjct: 175 VGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEEDD 227
Score = 39.3 bits (90), Expect = 0.017
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 29/108 (26%)
Query: 211 FLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAA 270
+L D ED ++ DSE+++D D D D EEEE + P +++
Sbjct: 103 YLDGFDQEDNEAPDSEEEDDED-----GDEDDEEEEENEAG---------PPEGYEEEEE 148
Query: 271 EKKREDKAKKKHDRKSKRLDEEEEED---NEGGEWERVRGGVPLVKEK 315
E++ ED+ DE+E+ED +E GE E G L+KE+
Sbjct: 149 EEEEEDE------------DEDEDEDEAGSELGEGEEEVGLSYLMKEE 184
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 54.3 bits (129), Expect = 5e-07
Identities = 62/241 (25%), Positives = 91/241 (37%), Gaps = 59/241 (24%)
Query: 6 TTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEELTNLIR 65
++ S S+S+SS EE YG+ L DEED R+ + + +R +EL N I
Sbjct: 162 SSSSSSDSDSSSEDEEF-----HDGYGED---LMGDEEDRARLEQMTEKEREQELFNRIE 213
Query: 66 TIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNELWEDKE 125
R+V K FE+ K K E KE
Sbjct: 214 K-------REVLK--RRFEIKKKLKTAKKK--------------------------EKKE 238
Query: 126 GKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDED 185
KKK + K +K + ES +TS+ + DE +K + E E
Sbjct: 239 KKKKQEEEQEK---------KKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAER 289
Query: 186 EDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEE 245
E +A KK + K + D++E+ ED + E D S +S SD EEE
Sbjct: 290 EKRKNRTAELLAKK-------QPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEE 342
Query: 246 E 246
+
Sbjct: 343 K 343
Score = 46.2 bits (108), Expect = 1e-04
Identities = 44/235 (18%), Positives = 89/235 (37%), Gaps = 61/235 (25%)
Query: 125 EGKKKMNKNNAKALSTLRQKIRKY------NRDFESHITSYKQNPEQSADEDAEKNEEDS 178
+ KKK + T++++ K ++D + ++ ++ +D ++ + DS
Sbjct: 110 KNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDS 169
Query: 179 EGSSDEDEDEDGVSAATF------------------------------------LKKKSE 202
+ SS+++E DG +KKK +
Sbjct: 170 DSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLK 229
Query: 203 APSGESRKFLKKMDDEDEDSED-----------------SEDDEDWDTGSTSSDSDSEEE 245
+ +K KK +E+++ + S+ DE D S + + E
Sbjct: 230 TAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAER 289
Query: 246 EGKQTALASRFLKKAP--TTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNE 298
E ++ A KK P T++ E++ +DK+ +K DR S+ +EEE+ E
Sbjct: 290 EKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKE 344
Score = 31.2 bits (69), Expect = 4.6
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 219 DEDSEDSEDDEDWDTGSTS----SDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKR 274
D D+EDS DE+ D S SDSEE+E + A+ + +D++ K
Sbjct: 52 DSDTEDSGSDENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSDSDDEWTFGSNKN 111
Query: 275 EDKAKKKHDRKSKRLDEEEEEDNEGGEWER 304
+ K K + K + ++ + G ++
Sbjct: 112 KKKGKARKIEKKGTMKKQANKTASSGSSDK 141
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 53.9 bits (128), Expect = 7e-07
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 33/214 (15%)
Query: 121 WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEG 180
W+ E + ++ K+ K R+ K R E+ +E+++ + SE
Sbjct: 2123 WDFSEKRSELTKDEKKLARKQRKLANKMRRMINKE--------EKMTEEESKLARKHSEV 2174
Query: 181 SSDEDEDEDGVS---AATFLK----KKSEAPSGES--RKFLKKMDDEDEDSEDSEDDEDW 231
D DE+E G+ FLK K+ EA G+ KF ++D+ + + SE+ E
Sbjct: 2175 ILD-DEEEGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESL 2233
Query: 232 DTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDE 291
+S S EEE ++ R ++ +E++K E+ E + +K+ + K K+ E
Sbjct: 2234 LDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKE 2293
Query: 292 EEEEDNEGGEWERVRGGVPLVKEKPKMFAKGTEI 325
+++E+ V+EK ++F + EI
Sbjct: 2294 KKKEE---------------VQEKEEVFEEKEEI 2312
Score = 47.8 bits (112), Expect = 5e-05
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 112 DLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDA 171
D + +EL +D+ KK+ + K + +R+ I K + E +++ E D++
Sbjct: 2124 DFSEKRSELTKDE---KKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEVILDDEE 2180
Query: 172 EKNEEDSE-------------GSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDE 218
E E+ E + D+ ++ S+ + E S E L +++ +
Sbjct: 2181 EGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQ 2240
Query: 219 DEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKA 278
+ S + E++ + + + EEEE K+ + ++ KK EKK+E+
Sbjct: 2241 ESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQ 2300
Query: 279 KKKHDRKSKR-----------LDEEEEEDNEGGEWERVRGGVPLVKEK 315
+K+ + K DEEEEE++ E E R L KEK
Sbjct: 2301 EKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEK 2348
Score = 38.1 bits (87), Expect = 0.038
Identities = 43/213 (20%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 50 RSAKDKRFEELTNLIRTIRNAMK--IRDVTKCLEEFELLGKAYGKA-------KSIVDKE 100
RS K ++L R + N M+ I K EE L + + + I ++E
Sbjct: 2129 RSELTKDEKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGGIEEEE 2188
Query: 101 GVP----RFYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKY---NRDFE 153
+P R+ R A D E + + + + ++ ++ + +L ++ K + + E
Sbjct: 2189 VIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEE 2248
Query: 154 SHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLK 213
++ E+ E+ E+ +E+ EG + E E+ +KK E + F +
Sbjct: 2249 EEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEE 2308
Query: 214 KMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEE 246
K + E+ +S DE+ + S S + + + E+
Sbjct: 2309 KEEIMSEEETESLSDEEEEEESCSLEEEVDREK 2341
Score = 30.8 bits (68), Expect = 6.0
Identities = 40/192 (20%), Positives = 72/192 (37%), Gaps = 13/192 (6%)
Query: 122 EDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSA--DEDAEKNEEDSE 179
E+K+ +K K KA+ R K+ K R+ + E+ A +E K E
Sbjct: 1391 EEKKTFQKSPKQGRKAVQKER-KVGKIKREMTKEERDMSEEVEEMATLEEKVVKQEGKLV 1449
Query: 180 GSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSD 239
+D A K+ GE+RK K +E E E+++ G S
Sbjct: 1450 MIERTPSWQDWKKAWDEWKQVH----GETRKSWKAWKEEWEKRLLQEEEKLHQAGEKLSP 1505
Query: 240 SDSEEEEGKQTA------LASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEE 293
+ +E K+ + L + K E E++ ++ + K +++ EE+
Sbjct: 1506 EEEMLQEDKKLKWEEWKQVWENMLSSKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTEEQ 1565
Query: 294 EEDNEGGEWERV 305
E +W R+
Sbjct: 1566 RHIQEEHKWARI 1577
Score = 30.8 bits (68), Expect = 6.0
Identities = 36/202 (17%), Positives = 84/202 (41%), Gaps = 13/202 (6%)
Query: 114 EDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEK 173
E+ L++ E +++M + + K +++ + +S YK E + +E+ +
Sbjct: 1493 EEKLHQAGEKLSPEEEMLQEDKKLKWEEWKQVWENMLSSKSKEQQYKDEEEVTLEEEVSR 1552
Query: 174 NEEDSEGSSDEDED--EDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSED--DE 229
E+ E E++ ++ A +K++ A +++ K +E++ +++ E
Sbjct: 1553 EGEEKEQQVTEEQRHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQEERQLAQE 1612
Query: 230 DWDTGS-----TSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDR 284
+ T D + + EGK ++ ++ + +KR+ AKK
Sbjct: 1613 ERKLAQAYVKITQDDREMAQAEGKFAQKEETLAQRGEKLSQEAEKLAQKRKKLAKK---- 1668
Query: 285 KSKRLDEEEEEDNEGGEWERVR 306
K EEE+ +GG+ V+
Sbjct: 1669 WEKVAREEEKLAKKGGKLAEVK 1690
Score = 30.4 bits (67), Expect = 7.9
Identities = 45/248 (18%), Positives = 101/248 (40%), Gaps = 40/248 (16%)
Query: 124 KEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAE-------KNEE 176
K+G+K + K + + +++++ K RD + E+ ++ + + +
Sbjct: 1401 KQGRKAVQKE--RKVGKIKREMTKEERDMSEEVEEMATLEEKVVKQEGKLVMIERTPSWQ 1458
Query: 177 DSEGSSDEDEDEDGVSAATFLKKKSE------------APSGESRKFLKKMDDEDEDSED 224
D + + DE + G + ++ K E +GE ++M ED+ +
Sbjct: 1459 DWKKAWDEWKQVHGETRKSWKAWKEEWEKRLLQEEEKLHQAGEKLSPEEEMLQEDKKLKW 1518
Query: 225 SEDDEDWDTGSTSSDSDSEEEEGKQTALASRFL-----KKAPTTDEDKKAAEKKREDKAK 279
E + W+ +S + + ++ ++ L K+ T+E + E+ + +
Sbjct: 1519 EEWKQVWENMLSSKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTEEQRHIQEEHKWARIH 1578
Query: 280 KKHDRKSKRLDEEE----EEDNEGGEWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLN 335
+K R K+ +EE +E+ + + ER L +E+ K+ +IT +
Sbjct: 1579 RKRARAEKKRAQEERKLAQEEEKLAQEER-----QLAQEERKLAQAYVKIT-----QDDR 1628
Query: 336 EILQARGK 343
E+ QA GK
Sbjct: 1629 EMAQAEGK 1636
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 53.9 bits (128), Expect = 7e-07
Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 20/234 (8%)
Query: 126 GKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDED 185
GKK +K K + ++++ +D + ++ E+ +E + ++ +G D +
Sbjct: 115 GKKGEDKTTQKDTTDSESELKQGKKDSKKG-----KDIEKGKEEKLDAKKDSKKGKKDAE 169
Query: 186 EDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDS--- 242
+ +D + +SE G ++K KK + +DS + + + G T DS
Sbjct: 170 KGKDSAT-------ESEDEKGGAKKDNKKDKKDSNKGKDSATESEGEKGGTEKDSKKGKK 222
Query: 243 EEEEGKQTALASRFLKKAPTTDED-KKAAEKKREDKAKKKHDRKSKRLDEEEEE----DN 297
+ ++GK +A+ + +K DED KK A K E K KK ++ K+ +++++ D+
Sbjct: 223 DSKKGKDSAIELQAVKADEKKDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKKPSSTDS 282
Query: 298 EGGEWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQ 351
+ + + K+ K+ K TE A K + + KK + A+
Sbjct: 283 DSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAK 336
Score = 53.9 bits (128), Expect = 7e-07
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 40/211 (18%)
Query: 114 EDYLNELWEDKEGKKKMNKNNAKALSTLRQK--IRKYNRDFESHITSYKQNPEQSADE-- 169
E+ L+ + K+GKK K A + +K +K N+ + K + +S E
Sbjct: 152 EEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKKDSNKGKDSATESEGEKG 211
Query: 170 ----DAEKNEEDSEGS-----------SDEDEDEDGVSAATFLKKKSEAPSGESRKFLKK 214
D++K ++DS+ +DE +DEDG K +A G+ K KK
Sbjct: 212 GTEKDSKKGKKDSKKGKDSAIELQAVKADEKKDEDG---------KKDANKGDESKDAKK 262
Query: 215 MDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTAL-ASRFLKKAPTTDEDKKAAEKK 273
D E + +D + +S+DSDS+++ K++ A++ KK D +K++A+ K
Sbjct: 263 --DAKEIKKGKKDKKK----PSSTDSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSK 316
Query: 274 REDKAKKKHD-----RKSKRLDEEEEEDNEG 299
++ K K D +K+ + DE+++ +G
Sbjct: 317 KDAKKNAKKDAKKDAKKNAKKDEKKDAKKKG 347
Score = 39.7 bits (91), Expect = 0.013
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 197 LKKKSEAPS---GESRKFLKKMDDEDEDSEDSE---DDEDWDTGSTSSDSDSEEEEGKQT 250
L + SE PS R+ LK + DS+ +E ED T ++DS+SE ++GK+
Sbjct: 81 LMRISERPSVYLAARRQPLKPTRTVEVDSKAAEIGKKGEDKTTQKDTTDSESELKQGKKD 140
Query: 251 ALASRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDE----------EEEEDNEG- 299
+ + ++K D K KK + A+K D ++ DE ++++ N+G
Sbjct: 141 SKKGKDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKKDSNKGK 200
Query: 300 ---GEWERVRGGVPLVKEKPKMFA-KGTEITHAVVIKKLNEILQARGKKGTDR 348
E E +GG +K K + KG + + K +E GKK ++
Sbjct: 201 DSATESEGEKGGTEKDSKKGKKDSKKGKDSAIELQAVKADEKKDEDGKKDANK 253
>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member A [Homo sapiens]
Length = 249
Score = 53.9 bits (128), Expect = 7e-07
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 202 EAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAP 261
EAP ++ +++ +DDE+ED ++ E DED D D EEEEG++ ++ +
Sbjct: 154 EAPDSDAEGYVEGLDDEEEDEDEEEYDEDAQVVEDEEDED-EEEEGEEEDVSGEEEEDEE 212
Query: 262 TTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNE 298
++ + E+ E+ +++ +K KR E+E ED++
Sbjct: 213 GYNDGEVDDEEDEEELGEEERGQKRKREPEDEGEDDD 249
Score = 42.0 bits (97), Expect = 0.003
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 154 SHITSYKQNPEQSADEDAE---KNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRK 210
+++ Y ++ +++ D DAE + +D E DE+E ++ + + E GE
Sbjct: 143 TYLDGYDRDDKEAPDSDAEGYVEGLDDEEEDEDEEEYDEDAQVVEDEEDEDEEEEGE--- 199
Query: 211 FLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEE 244
+ED E+ ED+E ++ G + D EE
Sbjct: 200 ------EEDVSGEEEEDEEGYNDGEVDDEEDEEE 227
Score = 40.4 bits (93), Expect = 0.008
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 164 EQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSE 223
E DED E+ E+ + S +E+EDE+G + ++ E GE + K+ + +++ E
Sbjct: 187 EDEEDEDEEEEGEEEDVSGEEEEDEEGYNDGEVDDEEDEEELGEEERGQKRKREPEDEGE 246
Query: 224 DSE 226
D +
Sbjct: 247 DDD 249
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 53.5 bits (127), Expect = 9e-07
Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 43/288 (14%)
Query: 39 SEDEEDTKRVVRSAKDKRFEELTNLIRTIRNAMKIRDVTKCLEEF------ELLGKAYGK 92
SED+E+ K+ + +K E + R + + + + ++E E G G+
Sbjct: 990 SEDQEEKKKDSKKSKANLLERRSTRTRKCIS-YRFDEFDEAIDEAIEDDIKEADGGGVGR 1048
Query: 93 AKSIVDKEGVPRFYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYN--- 149
K I G I + D E +K NK +A + R+K R+ N
Sbjct: 1049 GKDISTITGHRGKDISTILDEE-------------RKENKRPQRAAAARRKKRRRLNDLD 1095
Query: 150 ---------RDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKK 200
+ E I+ Q+ +DE+ +++EED + D D D + L++
Sbjct: 1096 SDSNLDEEESEDEFKISDGSQDEFVVSDENPDESEEDPPSNDDSDTD----FCSRRLRRH 1151
Query: 201 SEAPSGESRKFLKKM-------DDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALA 253
P +SR+ +K DDE+E+SE++ D + D SD E +
Sbjct: 1152 PSRPMRQSRRLRRKTPKKKYSDDDEEEESEENSRDSESDFSDDFSDDFVETRRRRSRRNQ 1211
Query: 254 SRFLKKAPTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNEGGE 301
R + ++ D +R + ++ H R+ + EE ++ E
Sbjct: 1212 KRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYLSKNSE 1259
Score = 46.2 bits (108), Expect = 1e-04
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 31/164 (18%)
Query: 157 TSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMD 216
T K+ + +E++E+N DSE +D +D V ++ + + R+ K D
Sbjct: 1166 TPKKKYSDDDEEEESEENSRDSESDFSDDFSDDFVET-----RRRRSRRNQKRQINYKED 1220
Query: 217 DEDEDSE------------------DSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLK 258
E + S+ SE +E + S +S+ D +E K++ K
Sbjct: 1221 SESDGSQKSLRRGKEIRRVHKRRLSSSESEESYL--SKNSEDDELAKESKRSVR-----K 1273
Query: 259 KAPTTDEDKKAAEKKREDKAKKKHDRKSK-RLDEEEEEDNEGGE 301
+ +TDE +A E++ E++ K R + DEEE DN G+
Sbjct: 1274 RGRSTDEYSEADEEEEEEEGKPSRKRLHRIETDEEESCDNAHGD 1317
Score = 40.0 bits (92), Expect = 0.010
Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 15/189 (7%)
Query: 124 KEGKKKMNKNNAKALS--TLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGS 181
K KKK + ++ + S R ++ DF ++ + + +EDSE
Sbjct: 1165 KTPKKKYSDDDEEEESEENSRDSESDFSDDFSDDFVETRRRRSRRNQKRQINYKEDSESD 1224
Query: 182 SDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSD 241
+ G K++ + E +L K ++DE +++S+ ST S+
Sbjct: 1225 GSQKSLRRGKEIRRVHKRRLSSSESEE-SYLSKNSEDDELAKESKRSVRKRGRSTDEYSE 1283
Query: 242 SEEEEGKQTALASRFLKKAPTTDEDKK-------AAEKKREDK-----AKKKHDRKSKRL 289
++EEE ++ SR TDE++ A + R+ + ++++ +K R+
Sbjct: 1284 ADEEEEEEEGKPSRKRLHRIETDEEESCDNAHGDANQPARDSQPRVLPSEQESTKKPYRI 1343
Query: 290 DEEEEEDNE 298
+ +EEED E
Sbjct: 1344 ESDEEEDFE 1352
Score = 33.5 bits (75), Expect = 0.93
Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 25/248 (10%)
Query: 92 KAKSIVDKEGVPRFYIRILADLED---YLNELWEDKEGKKKMNKNNAKALSTLRQKIRKY 148
K K+I+++E ++ + +D Y +L +D + + + + + S+ + +R
Sbjct: 136 KFKNIINEEDADTMRLQPIGRDKDGLMYWYQLDQDHNVRMYIEEQDDQDGSSWKCIVRNR 195
Query: 149 NRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGES 208
N E+ Q ++++ E S EDE+ KK+ E P E
Sbjct: 196 NELAETLALLKAQIDPVLLKNSSQQDNSSRESPSLEDEET---------KKEEETPKQEE 246
Query: 209 RKFLKKMDDEDE--DSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDED 266
+K +KM E++ D E+ + + + + E+E K + L+K +E+
Sbjct: 247 QKESEKMKSEEQPMDLENRSTANVLEETTVKKEKEDEKELVKLPVIVK--LEKPLPENEE 304
Query: 267 KKAAEKKRED--------KAKKKHDRKSKRLDEEEEEDNEGGEWERVRGGVPLVKEKPKM 318
KK +++ + K + K R + + E E ER+ G +K ++
Sbjct: 305 KKIIKEESDSFKENVKPIKVEVKECRADPKDTKSSMEKPVAQEPERIEFG-GNIKSSHEI 363
Query: 319 FAKGTEIT 326
K TE T
Sbjct: 364 TEKSTEET 371
Score = 33.1 bits (74), Expect = 1.2
Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 21/239 (8%)
Query: 24 TKPVGGNYGKQPLL--LSEDEEDTKRVVRSAKDKRFEELTNLIRTIRNAMKIRDVTKCLE 81
T VGG K+ L L ED E TK + + + + + T + K + K +
Sbjct: 653 TSTVGGQSVKKVDLETLKEDSEFTKVEMDNLDNAQTSGIEEPSETKGSMQKSKFKYKLVP 712
Query: 82 EFELLGKAYGKAKSIVDKEGVPRFYIRILADLE--DYLNELWEDKEGKKKMNKNNAKAL- 138
E E + S KEG+ + IRI + + D ++ E + ++K K K
Sbjct: 713 EEETTASENTEITSERQKEGI-KLTIRISSRKKKPDSPPKVLEPENKQEKTEKEEEKTNV 771
Query: 139 -STLRQKIRKYNRDFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFL 197
TLR+ R +R Q ++ E ++ EE+S D+ E L
Sbjct: 772 GRTLRRSPR-ISRPTAKVAEIRDQKADKKRGEGEDEVEEESTALQKTDKKE-------IL 823
Query: 198 KKKSEAPSGESRKFLKKMDDEDEDSED------SEDDEDWDTGSTSSDSDSEEEEGKQT 250
KK + + + K K S S +DE +GS S + SEEEE K++
Sbjct: 824 KKSEKDTNSKVSKVKPKGKVRWTGSRTRGRWKYSSNDESEGSGSEKSSAASEEEEEKES 882
Score = 31.6 bits (70), Expect = 3.5
Identities = 28/145 (19%), Positives = 57/145 (39%), Gaps = 19/145 (13%)
Query: 160 KQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSE----------------- 202
++ P+Q +++EK + + + E+ V T +KK+ E
Sbjct: 239 EETPKQEEQKESEKMKSEEQPMDLENRSTANVLEETTVKKEKEDEKELVKLPVIVKLEKP 298
Query: 203 APSGESRKFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPT 262
P E +K +K+ D +++ E + + D+ S E K A ++
Sbjct: 299 LPENEEKKIIKEESDSFKENVKPIKVEVKECRADPKDTKSSME--KPVAQEPERIEFGGN 356
Query: 263 TDEDKKAAEKKREDKAKKKHDRKSK 287
+ EK E+ K K+D+++K
Sbjct: 357 IKSSHEITEKSTEETEKLKNDQQAK 381
Score = 31.2 bits (69), Expect = 4.6
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 50 RSAKDKRFEELTNLIRTIRNAMKIRDVTKCLEEF--ELLGKAYGKAKSIVDKEGVPRFYI 107
+ K ++ EE TN+ RT+R + +I T + E + K G+ + V++E
Sbjct: 758 KQEKTEKEEEKTNVGRTLRRSPRISRPTAKVAEIRDQKADKKRGEGEDEVEEESTALQK- 816
Query: 108 RILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSA 167
D ++ L + +D K K K T + ++ + S+ S E+S+
Sbjct: 817 ---TDKKEILKKSEKDTNSKVSKVKPKGKVRWTGSRTRGRWK--YSSNDESEGSGSEKSS 871
Query: 168 DEDAEKNEEDSEGSSDEDEDE 188
E+ E++SE + D+DE
Sbjct: 872 AASEEEEEKESEEAILADDDE 892
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 53.5 bits (127), Expect = 9e-07
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 157 TSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMD 216
TS K E+ +E+ E+ EE+ EG +E+E E+ ++ E E + +
Sbjct: 399 TSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDE 458
Query: 217 DEDEDSEDSEDD---EDWDTGSTSSDSD----SEEEEGKQTALASRFLKKAPTTDEDKKA 269
+E+ED E S + EDW G + +EE + L FL+ +D D +
Sbjct: 459 EEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTL--HFLEGGEDSDSDSEE 516
Query: 270 AEKKREDKAKKKHDRKSKRLDEEEEEDNEGGE 301
+ + ED DE++++D E G+
Sbjct: 517 EDDEEEDDE-----------DEDDDDDEEDGD 537
Score = 45.4 bits (106), Expect = 2e-04
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 16/105 (15%)
Query: 160 KQNPEQSADEDA-EKNEEDSEGSSDEDEDED---------GVSAATFLKKKSEAPSGESR 209
++ E+ D D+ E+ EED E SS+ E ED G A +++++ P+
Sbjct: 445 EEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPT---L 501
Query: 210 KFLKKMDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALAS 254
FL+ +D D DSE+ +D+E+ D D D +EE+G + + S
Sbjct: 502 HFLEGGEDSDSDSEEEDDEEEDDE---DEDDDDDEEDGDEVPVPS 543
Score = 40.8 bits (94), Expect = 0.006
Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 163 PEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLK-KKSEAPSGESRKFLKKMDDEDED 221
P + + E+ E +E+E+E+G + ++ E GE + ++ + E+E
Sbjct: 393 PNATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEG 452
Query: 222 SEDSEDDEDWDTGSTSSDSDSE-------EEEGKQTALASRFLKKAPTTD--EDKKAAEK 272
DS+++E+ D S+S ++E E G A ++ + PT E + ++
Sbjct: 453 DVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDS 512
Query: 273 KREDKAKKKHDRKSKRLDEEEEEDNE 298
E++ ++ D + + D++EE+ +E
Sbjct: 513 DSEEEDDEEEDDEDEDDDDDEEDGDE 538
>gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo
sapiens]
Length = 674
Score = 53.5 bits (127), Expect = 9e-07
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Query: 164 EQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDEDSE 223
E + +E+ E+ +EDS+ SDE+E E S++T + FLK + +
Sbjct: 348 EDTEEEEDEEEDEDSDSGSDEEEGEAEASSST----------PATGVFLKSWVYQPGEDT 397
Query: 224 DSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDKAKKKHD 283
+ E+DED DTG S++ + E E T AS FLK + E+ + ++ K D
Sbjct: 398 EEEEDEDSDTG--SAEDEREAETSASTPPASAFLKAWVYRPGEDTEEEEDEDVDSEDKED 455
Query: 284 RKSKRLDEEEEE 295
L E E +
Sbjct: 456 DSEAALGEAESD 467
Score = 44.3 bits (103), Expect = 5e-04
Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 32/164 (19%)
Query: 163 PEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEA--------PSGESRKFLKK 214
P+ SA A++ + S DE+E V A +K EA PS + ++
Sbjct: 288 PQSSAP--AQRPQLKSWWCQPSDEEEGEVKALGAAEKDGEAECPPCIPPPSAFLKAWVYW 345
Query: 215 MDDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLK-----------KAPTT 263
++ E+ ED E+DED D+G S + + E E T FLK +
Sbjct: 346 PGEDTEEEEDEEEDEDSDSG--SDEEEGEAEASSSTPATGVFLKSWVYQPGEDTEEEEDE 403
Query: 264 DEDKKAAEKKREDKAKKKHDRKSKRL---------DEEEEEDNE 298
D D +AE +RE + S L D EEEED +
Sbjct: 404 DSDTGSAEDEREAETSASTPPASAFLKAWVYRPGEDTEEEEDED 447
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,852,604
Number of Sequences: 37866
Number of extensions: 1666679
Number of successful extensions: 26207
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 748
Number of HSP's that attempted gapping in prelim test: 11252
Number of HSP's gapped (non-prelim): 6943
length of query: 914
length of database: 18,247,518
effective HSP length: 111
effective length of query: 803
effective length of database: 14,044,392
effective search space: 11277646776
effective search space used: 11277646776
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.