Guide to the Human Genome
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Name: GGTLC2 Sequence: fasta or formatted (218aa) NCBI GI: 218505805
Description:

gamma-glutamyltransferase-like 4 isoform 1

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         22           3
 C cysteine            0.5          1           1
 D aspartate           5.5         12           2
 E glutamate           5.0         11           2
 F phenylalanine       4.6         10           2
 G glycine             6.4         14           2
 H histidine           3.7          8           3
 I isoleucine          6.0         13           2
 K lysine              2.3          5           1
 L leucine             4.6         10           2
 M methionine          2.3          5           1
 N asparagine          4.1          9           1
 P proline             8.3         18           2
 Q glutamine           5.0         11           1
 R arginine            3.7          8           1
 S serine              8.7         19           2
 T threonine           7.8         17           2
 V valine              7.3         16           2
 W tryptophan          0.9          2           1
 Y tyrosine            3.2          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-glutamyltransferase-like 4 isoform 1 
GGT1                  0.886   gamma-glutamyltransferase 1 precursor 
GGT1                  0.886   gamma-glutamyltransferase 1 precursor 
GGT1                  0.886   gamma-glutamyltransferase 1 precursor 
GGT1                  0.886   gamma-glutamyltransferase 1 precursor 
GGTLC1                0.843   gamma-glutamyltransferase light chain 1 
GGTLC1                0.843   gamma-glutamyltransferase light chain 1 
GGT2                  0.805   PREDICTED: gamma-glutamyltransferase 2 isoform 3 [H...
GGT2                  0.805   PREDICTED: gamma-glutamyltransferase 2 isoform 1 [H...
GGT5                  0.188   gamma-glutamyltransferase 5 isoform c 
GGT5                  0.188   gamma-glutamyltransferase 5 isoform b 
GGT5                  0.186   gamma-glutamyltransferase 5 isoform a 
GGT7                  0.107   gamma-glutamyltransferase 7 
SPEN                  0.019   spen homolog, transcriptional regulator 
LOC100292575          0.012   PREDICTED: similar to melanoma antigen family C, 2 ...
DAB2                  0.012   disabled homolog 2 
MAGEC2                0.012   melanoma antigen family C, 2 
HLF                   0.012   hepatic leukemia factor 
ARPP-21               0.012   cyclic AMP-regulated phosphoprotein, 21 kD isoform 1...
LOC100132214          0.010   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.010   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.010   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.010   PREDICTED: similar to calcium-promoted Ras inactiva...
RASA4                 0.010   RAS p21 protein activator 4 isoform 2 
RASA4                 0.010   RAS p21 protein activator 4 isoform 1 
PDZD2                 0.010   PDZ domain containing 2 
BCL9                  0.010   B-cell CLL/lymphoma 9 
POPDC2                0.010   popeye protein 2 
MLLT4                 0.007   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.007   myeloid/lymphoid or mixed-lineage leukemia (trithora...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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