Guide to the Human Genome
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Name: GGTLC1 Sequence: fasta or formatted (225aa) NCBI GI: 30581157
Description:

gamma-glutamyltransferase light chain 1

Referenced in:

Glutathione Pathways

Other entries for this name:
alt mRNA [225aa] gamma-glutamyltransferase light chain 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         22           3
 C cysteine            0.4          1           1
 D aspartate           4.9         11           2
 E glutamate           4.9         11           2
 F phenylalanine       4.0          9           2
 G glycine             8.0         18           2
 H histidine           2.7          6           3
 I isoleucine          6.2         14           2
 K lysine              2.2          5           1
 L leucine             5.3         12           2
 M methionine          3.6          8           1
 N asparagine          4.0          9           2
 P proline             5.8         13           2
 Q glutamine           4.9         11           1
 R arginine            3.6          8           1
 S serine              8.9         20           2
 T threonine           8.4         19           2
 V valine              8.0         18           2
 W tryptophan          1.3          3           1
 Y tyrosine            3.1          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-glutamyltransferase light chain 1 
GGTLC1                1.000   gamma-glutamyltransferase light chain 1 
GGT1                  0.951   gamma-glutamyltransferase 1 precursor 
GGT1                  0.951   gamma-glutamyltransferase 1 precursor 
GGT1                  0.951   gamma-glutamyltransferase 1 precursor 
GGT1                  0.951   gamma-glutamyltransferase 1 precursor 
GGT2                  0.867   PREDICTED: gamma-glutamyltransferase 2 isoform 3 [H...
GGT2                  0.867   PREDICTED: gamma-glutamyltransferase 2 isoform 1 [H...
GGTLC2                0.827   gamma-glutamyltransferase-like 4 isoform 1 
GGT5                  0.250   gamma-glutamyltransferase 5 isoform c 
GGT5                  0.250   gamma-glutamyltransferase 5 isoform b 
GGT5                  0.248   gamma-glutamyltransferase 5 isoform a 
GGT7                  0.124   gamma-glutamyltransferase 7 
GGT6                  0.019   gamma-glutamyltransferase 6 isoform a 
GGT6                  0.019   gamma-glutamyltransferase 6 isoform b 
DAB2                  0.014   disabled homolog 2 
PDZD2                 0.012   PDZ domain containing 2 
HLF                   0.009   hepatic leukemia factor 
CAPRIN2               0.007   C1q domain containing 1 isoform 1 
CAPRIN2               0.007   C1q domain containing 1 isoform 3 
LONRF3                0.007   LON peptidase N-terminal domain and ring finger 3 is...
LONRF3                0.007   LON peptidase N-terminal domain and ring finger 3 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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