Guide to the Human Genome
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Name: GALNTL5 Sequence: fasta or formatted (443aa) NCBI GI: 21686971
Description:

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         16           1
 C cysteine            1.6          7           1
 D aspartate           5.2         23           2
 E glutamate           6.3         28           2
 F phenylalanine       4.7         21           2
 G glycine             5.9         26           2
 H histidine           3.8         17           2
 I isoleucine          7.4         33           2
 K lysine              7.4         33           2
 L leucine            10.2         45           2
 M methionine          2.5         11           1
 N asparagine          4.1         18           1
 P proline             4.7         21           1
 Q glutamine           3.2         14           2
 R arginine            6.1         27           2
 S serine              7.0         31           2
 T threonine           4.1         18           1
 V valine              6.1         27           2
 W tryptophan          2.3         10           1
 Y tyrosine            3.8         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace... 
GALNT11               0.478   N-acetylgalactosaminyltransferase 11 
GALNT1                0.338   polypeptide N-acetylgalactosaminyltransferase 1 [Hom...
GALNT13               0.336   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT4                0.319   polypeptide N-acetylgalactosaminyltransferase 4 [Hom...
GALNT2                0.307   polypeptide N-acetylgalactosaminyltransferase 2 [Homo...
GALNT14               0.306   N-acetylgalactosaminyltransferase 14 
GALNTL6               0.302   N-acetylgalactosaminyltransferase-like 6 
GALNTL2               0.300   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNTL1               0.299   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT7                0.298   polypeptide N-acetylgalactosaminyltransferase 7 [Ho...
GALNT5                0.297   N-acetylgalactosaminyltransferase 5 
GALNT12               0.294   N-acetylgalactosaminyltransferase 12 
GALNT3                0.287   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
GALNT10               0.284   GalNAc transferase 10 isoform a 
GALNT6                0.282   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
WBSCR17               0.252   UDP-GalNAc:polypeptide N-acetylgalactosaminyltransfe...
GALNT9                0.251   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT8                0.251   polypeptide N-acetylgalactosaminyltransferase 8 [Homo...
GALNTL4               0.245   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT10               0.070   GalNAc transferase 10 isoform b 
GALNT9                0.058   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
ASAP2                 0.007   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.007   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
APPBP2                0.007   amyloid beta precursor protein-binding protein 2 [Ho...
ALG5                  0.006   dolichyl-phosphate beta-glucosyltransferase isoform 1...
UCK2                  0.006   uridine-cytidine kinase 2 
DST                   0.004   dystonin isoform 4 
DST                   0.004   dystonin isoform 3 
DST                   0.004   dystonin isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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