Guide to the Human Genome
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Name: GALNTL4 Sequence: fasta or formatted (607aa) NCBI GI: 222446618
Description:

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         34           2
 C cysteine            2.5         15           1
 D aspartate           5.4         33           4
 E glutamate           7.6         46           2
 F phenylalanine       3.1         19           1
 G glycine             5.1         31           2
 H histidine           2.5         15           1
 I isoleucine          6.6         40           2
 K lysine              5.4         33           2
 L leucine             9.6         58           2
 M methionine          1.8         11           1
 N asparagine          4.3         26           1
 P proline             5.4         33           2
 Q glutamine           4.4         27           2
 R arginine            6.3         38           2
 S serine              7.1         43           2
 T threonine           3.8         23           1
 V valine              7.4         45           2
 W tryptophan          2.3         14           2
 Y tyrosine            3.8         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac... 
GALNT9                0.473   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
WBSCR17               0.468   UDP-GalNAc:polypeptide N-acetylgalactosaminyltransfe...
GALNT8                0.442   polypeptide N-acetylgalactosaminyltransferase 8 [Homo...
GALNT1                0.236   polypeptide N-acetylgalactosaminyltransferase 1 [Hom...
GALNT13               0.235   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT11               0.229   N-acetylgalactosaminyltransferase 11 
GALNT12               0.213   N-acetylgalactosaminyltransferase 12 
GALNT2                0.211   polypeptide N-acetylgalactosaminyltransferase 2 [Homo...
GALNT5                0.210   N-acetylgalactosaminyltransferase 5 
GALNT6                0.208   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
GALNT4                0.205   polypeptide N-acetylgalactosaminyltransferase 4 [Hom...
GALNT10               0.203   GalNAc transferase 10 isoform a 
GALNT3                0.199   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
GALNTL6               0.197   N-acetylgalactosaminyltransferase-like 6 
GALNTL1               0.197   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNTL2               0.189   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT14               0.184   N-acetylgalactosaminyltransferase 14 
GALNT9                0.181   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNTL5               0.179   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT7                0.170   polypeptide N-acetylgalactosaminyltransferase 7 [Ho...
GALNT10               0.056   GalNAc transferase 10 isoform b 
ALG5                  0.006   dolichyl-phosphate beta-glucosyltransferase isoform 1...
ABHD10                0.004   abhydrolase domain containing 10 
PRKG2                 0.004   protein kinase, cGMP-dependent, type II 
DNTTIP2               0.004   deoxynucleotidyltransferase, terminal, interacting p...
C2CD3                 0.004   C2 calcium-dependent domain containing 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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