Guide to the Human Genome
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Name: GALNT10 Sequence: fasta or formatted (603aa) NCBI GI: 38195091
Description:

GalNAc transferase 10 isoform a

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [274aa] GalNAc transferase 10 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         41           3
 C cysteine            2.2         13           1
 D aspartate           6.3         38           2
 E glutamate           5.8         35           1
 F phenylalanine       3.8         23           2
 G glycine             7.0         42           2
 H histidine           2.8         17           1
 I isoleucine          4.5         27           3
 K lysine              5.8         35           2
 L leucine             8.3         50           2
 M methionine          2.7         16           1
 N asparagine          4.0         24           2
 P proline             6.5         39           2
 Q glutamine           3.0         18           2
 R arginine            8.0         48           2
 S serine              6.0         36           2
 T threonine           4.1         25           1
 V valine              6.1         37           1
 W tryptophan          2.8         17           1
 Y tyrosine            3.6         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GalNAc transferase 10 isoform a 
GALNTL6               0.732   N-acetylgalactosaminyltransferase-like 6 
GALNT10               0.420   GalNAc transferase 10 isoform b 
GALNT1                0.321   polypeptide N-acetylgalactosaminyltransferase 1 [Hom...
GALNT13               0.316   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT7                0.300   polypeptide N-acetylgalactosaminyltransferase 7 [Ho...
GALNT4                0.295   polypeptide N-acetylgalactosaminyltransferase 4 [Hom...
GALNT5                0.287   N-acetylgalactosaminyltransferase 5 
GALNTL1               0.277   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT12               0.274   N-acetylgalactosaminyltransferase 12 
GALNT14               0.269   N-acetylgalactosaminyltransferase 14 
GALNT11               0.267   N-acetylgalactosaminyltransferase 11 
GALNT6                0.258   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
GALNT2                0.256   polypeptide N-acetylgalactosaminyltransferase 2 [Homo...
GALNTL2               0.255   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT3                0.254   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
WBSCR17               0.225   UDP-GalNAc:polypeptide N-acetylgalactosaminyltransfe...
GALNTL5               0.204   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNTL4               0.200   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT9                0.200   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT8                0.180   polypeptide N-acetylgalactosaminyltransferase 8 [Homo...
GALNT9                0.035   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
KLB                   0.004   klotho beta 
PNKP                  0.004   polynucleotide kinase 3' phosphatase 
DCBLD1                0.004   discoidin, CUB and LCCL domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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