Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ADCYAP1 Sequence: fasta or formatted (176aa) NCBI GI: 153266792
Description:

adenylate cyclase activating polypeptide precursor

Referenced in:

Hypothalamus
Peptide and Protein G-coupled Signals
Pituitary

Other entries for this name:
alt mRNA [176aa] adenylate cyclase activating polypeptide precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.6         24           4
 C cysteine            0.6          1           1
 D aspartate           5.1          9           2
 E glutamate           4.0          7           3
 F phenylalanine       1.7          3           1
 G glycine            12.5         22           3
 H histidine           2.3          4           1
 I isoleucine          3.4          6           2
 K lysine              5.7         10           2
 L leucine             8.5         15           2
 M methionine          2.3          4           1
 N asparagine          1.7          3           1
 P proline             6.2         11           2
 Q glutamine           2.3          4           1
 R arginine            9.1         16           2
 S serine              8.5         15           2
 T threonine           1.1          2           1
 V valine              5.1          9           1
 W tryptophan          0.6          1           1
 Y tyrosine            5.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adenylate cyclase activating polypeptide precursor ... 
ADCYAP1               1.000   adenylate cyclase activating polypeptide precursor ...
VIP                   0.136   vasoactive intestinal peptide isoform 1 preproprotein...
VIP                   0.133   vasoactive intestinal peptide isoform 2 preproprotei...
SCT                   0.067   secretin preproprotein 
GHRH                  0.036   growth hormone releasing hormone preproprotein [Homo...
LOC100287812          0.036   PREDICTED: hypothetical protein XP_002343253 
CDH24                 0.024   cadherin-like 24 isoform 2 
CDH24                 0.024   cadherin-like 24 isoform 1 
FUSSEL18              0.021   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.021   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.021   PREDICTED: functional smad suppressing element 18 [...
TNRC18                0.021   trinucleotide repeat containing 18 
MLL4                  0.018   myeloid/lymphoid or mixed-lineage leukemia 4 
MAN1A1                0.018   mannosidase, alpha, class 1A, member 1 
GCG                   0.015   glucagon preproprotein 
INPPL1                0.015   inositol polyphosphate phosphatase-like 1 
WRNIP1                0.015   Werner helicase interacting protein isoform 2 
WRNIP1                0.015   Werner helicase interacting protein isoform 1 
TNIP2                 0.015   A20-binding inhibitor of NF-kappaB activation 2 iso...
MAP3K12               0.015   mitogen-activated protein kinase kinase kinase 12 [H...
LOC100293149          0.015   PREDICTED: similar to protein phosphatase 1, regula...
JPH4                  0.015   junctophilin 4 
JPH4                  0.015   junctophilin 4 
PPP1R3F               0.015   protein phosphatase 1, regulatory (inhibitor) subuni...
CXorf49               0.012   hypothetical protein LOC100130361 
CXorf49B              0.012   hypothetical protein LOC100132994 
LOC100292079          0.012   PREDICTED: hypothetical protein XP_002345351 
LOC100294347          0.012   PREDICTED: hypothetical protein 
HNRNPAB               0.012   heterogeneous nuclear ribonucleoprotein A/B isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press