Guide to the Human Genome
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Name: GCG Sequence: fasta or formatted (180aa) NCBI GI: 4503945
Description:

glucagon preproprotein

Referenced in:

Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         13           2
 C cysteine            0.0          0           0
 D aspartate           8.9         16           1
 E glutamate           7.2         13           2
 F phenylalanine       6.1         11           1
 G glycine             5.0          9           1
 H histidine           2.2          4           1
 I isoleucine          4.4          8           1
 K lysine              5.6         10           1
 L leucine             6.7         12           1
 M methionine          2.8          5           1
 N asparagine          4.4          8           2
 P proline             1.7          3           1
 Q glutamine           5.6         10           1
 R arginine            8.9         16           2
 S serine              9.4         17           2
 T threonine           5.0          9           1
 V valine              4.4          8           1
 W tryptophan          2.2          4           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glucagon preproprotein 
VIP                   0.082   vasoactive intestinal peptide isoform 1 preproprotein...
VIP                   0.074   vasoactive intestinal peptide isoform 2 preproprotei...
GIP                   0.059   gastric inhibitory polypeptide preproprotein 
C1orf198              0.024   hypothetical protein LOC84886 isoform 3 
C1orf198              0.024   hypothetical protein LOC84886 isoform 2 
C1orf198              0.024   hypothetical protein LOC84886 isoform 1 
SCT                   0.021   secretin preproprotein 
ADCYAP1               0.015   adenylate cyclase activating polypeptide precursor ...
ADCYAP1               0.015   adenylate cyclase activating polypeptide precursor ...
BIRC5                 0.012   baculoviral IAP repeat-containing protein 5 isoform ...
IQGAP2                0.012   IQ motif containing GTPase activating protein 2 [Ho...
THRAP3                0.009   thyroid hormone receptor associated protein 3 [Homo...
ARL6IP4               0.006   SRp25 nuclear protein isoform 3 
KATNAL2               0.006   katanin p60 subunit A-like 2 
IRAK2                 0.006   interleukin-1 receptor-associated kinase 2 
STMN2                 0.006   superiorcervical ganglia, neural specific 10 
AHDC1                 0.006   AT hook, DNA binding motif, containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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