NBN 26108

Name: NBN	Sequence: fasta or formatted (754aa)		NCBI GI: 33356172
Description: nibrin		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 36 2 C cysteine 1.6 12 1 D aspartate 5.3 40 2 E glutamate 8.8 66 3 F phenylalanine 3.4 26 2 G glycine 4.8 36 3 H histidine 1.5 11 2 I isoleucine 5.3 40 2 K lysine 9.3 70 2 L leucine 8.2 62 3 M methionine 2.1 16 1 N asparagine 6.1 46 3 P proline 5.2 39 2 Q glutamine 5.2 39 4 R arginine 4.4 33 3 S serine 9.0 68 2 T threonine 6.8 51 3 V valine 5.6 42 2 W tryptophan 0.9 7 1 Y tyrosine 1.9 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nibrin CEP170 0.019 centrosomal protein 170kDa isoform beta CEP170 0.019 centrosomal protein 170kDa isoform gamma CCDC88A 0.016 coiled-coil domain containing 88A isoform 1 MYH1 0.016 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH2 0.016 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.016 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH8 0.015 myosin, heavy chain 8, skeletal muscle, perinatal [... MYH4 0.015 myosin, heavy polypeptide 4, skeletal muscle ANKRD12 0.014 ankyrin repeat domain 12 isoform 2 ANKRD12 0.014 ankyrin repeat domain 12 isoform 1 IWS1 0.014 IWS1 homolog CEP170 0.014 centrosomal protein 170kDa isoform alpha LOC645202 0.013 PREDICTED: hypothetical protein LOC645202 KTN1 0.013 kinectin 1 isoform b MYH15 0.012 myosin, heavy polypeptide 15 LOC727832 0.011 golgi autoantigen, golgin subfamily a-like MYH3 0.011 myosin, heavy chain 3, skeletal muscle, embryonic [H... CYLC1 0.011 cylicin, basic protein of sperm head cytoskeleton 1... GOLGB1 0.011 golgi autoantigen, golgin subfamily b, macrogolgin ... HTATSF1 0.011 HIV-1 Tat specific factor 1 HTATSF1 0.011 HIV-1 Tat specific factor 1 TP53BP1 0.011 tumor protein p53 binding protein 1 isoform 1 [Homo... TP53BP1 0.011 tumor protein p53 binding protein 1 isoform 2 [Homo... TP53BP1 0.011 tumor protein p53 binding protein 1 isoform 3 FAM161A 0.011 hypothetical protein LOC84140 LOC283767 0.011 golgi autoantigen, golgin subfamily a-like ERBB2IP 0.011 ERBB2 interacting protein isoform 7 ERBB2IP 0.011 ERBB2 interacting protein isoform 2 CNTLN 0.011 centlein isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.