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Search of human proteins with 151301211
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|151301211 transcription factor AP-2 beta-like 1 [Homo
sapiens]
(452 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|151301211 transcription factor AP-2 beta-like 1 [Homo sapiens] 917 0.0
gi|118582289 transcription factor AP-2 beta [Homo sapiens] 356 3e-98
gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens] 355 4e-98
gi|109389358 transcription factor AP-2 alpha isoform c [Homo sap... 353 2e-97
gi|73760407 transcription factor AP-2 alpha isoform b [Homo sapi... 353 2e-97
gi|194353976 transcription factor AP-2 epsilon (activating enhan... 324 9e-89
gi|4507445 transcription factor AP-2 gamma [Homo sapiens] 313 2e-85
gi|117320531 nuclear factor of kappa light polypeptide gene enha... 34 0.31
gi|117320540 nuclear factor of kappa light polypeptide gene enha... 34 0.31
gi|117320527 nuclear factor of kappa light polypeptide gene enha... 34 0.31
gi|151301154 mucin 6, gastric [Homo sapiens] 33 0.53
gi|169217460 PREDICTED: similar to Mucin-6, partial [Homo sapiens] 32 1.2
gi|46094081 development and differentiation enhancing factor 1 [... 31 2.6
gi|32698730 nuclear fragile X mental retardation protein interac... 31 2.6
gi|59938776 cAMP responsive element binding protein 5 isoform de... 30 4.5
gi|59938774 cAMP responsive element binding protein 5 isoform be... 30 4.5
gi|59938772 cAMP responsive element binding protein 5 isoform ga... 30 4.5
gi|59938770 cAMP responsive element binding protein 5 isoform al... 30 4.5
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 30 5.9
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 30 5.9
gi|37622896 LON peptidase N-terminal domain and ring finger 3 is... 30 5.9
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 30 5.9
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 30 5.9
gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens] 29 7.7
gi|27894361 nuclear receptor subfamily 4, group A, member 3 isof... 29 7.7
gi|27894359 nuclear receptor subfamily 4, group A, member 3 isof... 29 7.7
gi|27894357 nuclear receptor subfamily 4, group A, member 3 isof... 29 7.7
gi|27894355 nuclear receptor subfamily 4, group A, member 3 isof... 29 7.7
gi|221316609 sperm-associated cation channel 1 [Homo sapiens] 29 10.0
gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens] 29 10.0
>gi|151301211 transcription factor AP-2 beta-like 1 [Homo sapiens]
Length = 452
Score = 917 bits (2369), Expect = 0.0
Identities = 452/452 (100%), Positives = 452/452 (100%)
Query: 1 MSTTFPGLVHDAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYF 60
MSTTFPGLVHDAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYF
Sbjct: 1 MSTTFPGLVHDAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYF 60
Query: 61 STNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNAR 120
STNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNAR
Sbjct: 61 STNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNAR 120
Query: 121 ALKSSCLDEQRRELGCLDAYRRHDLSLMSHGSQYGMHPDQRLLPGPSLGLAAAGADDLQG 180
ALKSSCLDEQRRELGCLDAYRRHDLSLMSHGSQYGMHPDQRLLPGPSLGLAAAGADDLQG
Sbjct: 121 ALKSSCLDEQRRELGCLDAYRRHDLSLMSHGSQYGMHPDQRLLPGPSLGLAAAGADDLQG 180
Query: 181 SVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSP 240
SVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSP
Sbjct: 181 SVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSP 240
Query: 241 PECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHL 300
PECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHL
Sbjct: 241 PECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHL 300
Query: 301 ARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLG 360
ARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLG
Sbjct: 301 ARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLG 360
Query: 361 SSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGA 420
SSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGA
Sbjct: 361 SSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGA 420
Query: 421 ADSGQGHANSEKAPLRKTSEAAVKEGKTEKTD 452
ADSGQGHANSEKAPLRKTSEAAVKEGKTEKTD
Sbjct: 421 ADSGQGHANSEKAPLRKTSEAAVKEGKTEKTD 452
>gi|118582289 transcription factor AP-2 beta [Homo sapiens]
Length = 460
Score = 356 bits (913), Expect = 3e-98
Identities = 227/457 (49%), Positives = 277/457 (60%), Gaps = 66/457 (14%)
Query: 13 EIRHDG--SNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLH 70
E RHDG S+S RL QLG + S YSS+ PL++ T ++F PYF +Q P H
Sbjct: 27 EDRHDGVPSHSSRLSQLGSV-----SQGPYSSAPPLSH-TPSSDFQPPYFPPPYQPLPYH 80
Query: 71 HQSFHYEFQHSHPAVTPDAYSLNSLHHSQQY-----YQQIHHGEPTDFINLHNARALKSS 125
Y SH D YSLN LH QQ+ +Q E + A + S
Sbjct: 81 QSQDPY----SH---VNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQLS 133
Query: 126 CLDEQRRELGCLDAYRRHDLSLMS--HGSQYGMHPDQRLLPGPSL---GLAAAGADDLQG 180
LD +R + RR D+ L S HG GM G SL GL G +D+Q
Sbjct: 134 GLDPRRD----YHSVRRPDVLLHSAHHGLDAGM--------GDSLSLHGLGHPGMEDVQS 181
Query: 181 SVEAQ----------------------CGLVLNGQGGVIRRGGTCVVNPTDLFCSVPGRL 218
+A L++N G + G VN ++FCSVPGRL
Sbjct: 182 VEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFL----GGMSVNTGEVFCSVPGRL 237
Query: 219 SLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPA 278
SLLSSTSKYKVT+ EV+RRLSPPECLNASLLGG+LRRAKSKNGGR LRE+L+++GLNLPA
Sbjct: 238 SLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPA 297
Query: 279 GRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKMI 338
GRRKAANVTLLTSLVEGEA+HLARDFGY CETEFPAKAV E+L RQH + + +RK M+
Sbjct: 298 GRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNML 357
Query: 339 LATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTF 398
LATKQ+CKEF DLL+QDR+P+G+SRP+PIL+ IQ LTHFSLITHGFG PAICAAL+
Sbjct: 358 LATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTAL 417
Query: 399 QTVLSEMLNYLEK---HTTHKNGGAADSGQGHANSEK 432
Q L+E L ++K + T N + G G +K
Sbjct: 418 QNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDK 454
>gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens]
Length = 437
Score = 355 bits (912), Expect = 4e-98
Identities = 228/461 (49%), Positives = 278/461 (60%), Gaps = 70/461 (15%)
Query: 11 DAEIRHDGSNS--YRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTP 68
D E RHDG+++ RL QLG +V S Y+S+ PL++ T +F PYF +Q P
Sbjct: 13 DCEDRHDGTSNGTARLPQLG---TVGQSP--YTSAPPLSH-TPNADFQPPYFPPPYQ--P 64
Query: 69 LHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNARALKSSCLD 128
++ QS + +SH D YSLN LH Q H G P
Sbjct: 65 IYPQS---QDPYSH---VNDPYSLNPLHAQPQPQ---HPGWPGQ---------------- 99
Query: 129 EQRRELGCLDAYRR--HDLSLMSHGSQYGMHPDQRLLPGP---SLGLAAAGADDLQGSVE 183
Q +E G L +R H LS + Y H D LL GP S GL L ++E
Sbjct: 100 RQSQESGLLHTHRGLPHQLSGLDPRRDYRRHED--LLHGPHALSSGLGDLSIHSLPHAIE 157
Query: 184 A-----QCGLVLNGQGGVIRRGGTC----------------------VVNPTDLFCSVPG 216
G+ + Q VI++G VVNP ++FCSVPG
Sbjct: 158 EVPHVEDPGINIPDQT-VIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPG 216
Query: 217 RLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNL 276
RLSLLSSTSKYKVT+AEV+RRLSPPECLNASLLGG+LRRAKSKNGGR LREKLD++GLNL
Sbjct: 217 RLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNL 276
Query: 277 PAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKK 336
PAGRRKAANVTLLTSLVEGEA+HLARDFGY CETEFPAKAV E L RQH + EQ RK
Sbjct: 277 PAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKN 336
Query: 337 MILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALS 396
M+LATKQICKEF DLL+QDRSPLG+SRP PIL+ IQ LTHF+LI+HGFG+PA+CAA++
Sbjct: 337 MLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVT 396
Query: 397 TFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLRK 437
Q L+E L ++K N + ++ ++ RK
Sbjct: 397 ALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK 437
>gi|109389358 transcription factor AP-2 alpha isoform c [Homo
sapiens]
Length = 433
Score = 353 bits (906), Expect = 2e-97
Identities = 227/461 (49%), Positives = 278/461 (60%), Gaps = 70/461 (15%)
Query: 11 DAEIRHDGSNS--YRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTP 68
D + RHDG+++ RL QLG +V S Y+S+ PL++ T +F PYF +Q P
Sbjct: 9 DWQDRHDGTSNGTARLPQLG---TVGQSP--YTSAPPLSH-TPNADFQPPYFPPPYQ--P 60
Query: 69 LHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNARALKSSCLD 128
++ QS + +SH D YSLN LH Q H G P
Sbjct: 61 IYPQS---QDPYSH---VNDPYSLNPLHAQPQPQ---HPGWPGQ---------------- 95
Query: 129 EQRRELGCLDAYRR--HDLSLMSHGSQYGMHPDQRLLPGP---SLGLAAAGADDLQGSVE 183
Q +E G L +R H LS + Y H D LL GP S GL L ++E
Sbjct: 96 RQSQESGLLHTHRGLPHQLSGLDPRRDYRRHED--LLHGPHALSSGLGDLSIHSLPHAIE 153
Query: 184 A-----QCGLVLNGQGGVIRRGGTC----------------------VVNPTDLFCSVPG 216
G+ + Q VI++G VVNP ++FCSVPG
Sbjct: 154 EVPHVEDPGINIPDQT-VIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPG 212
Query: 217 RLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNL 276
RLSLLSSTSKYKVT+AEV+RRLSPPECLNASLLGG+LRRAKSKNGGR LREKLD++GLNL
Sbjct: 213 RLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNL 272
Query: 277 PAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKK 336
PAGRRKAANVTLLTSLVEGEA+HLARDFGY CETEFPAKAV E L RQH + EQ RK
Sbjct: 273 PAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKN 332
Query: 337 MILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALS 396
M+LATKQICKEF DLL+QDRSPLG+SRP PIL+ IQ LTHF+LI+HGFG+PA+CAA++
Sbjct: 333 MLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVT 392
Query: 397 TFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLRK 437
Q L+E L ++K N + ++ ++ RK
Sbjct: 393 ALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK 433
>gi|73760407 transcription factor AP-2 alpha isoform b [Homo
sapiens]
Length = 431
Score = 353 bits (906), Expect = 2e-97
Identities = 230/466 (49%), Positives = 280/466 (60%), Gaps = 72/466 (15%)
Query: 8 LVHD--AEIRHDGSNS--YRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTN 63
LVH A RHDG+++ RL QLG +V S Y+S+ PL++ T +F PYF
Sbjct: 2 LVHSFSAMDRHDGTSNGTARLPQLG---TVGQSP--YTSAPPLSH-TPNADFQPPYFPPP 55
Query: 64 HQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNARALK 123
+Q P++ QS + +SH D YSLN LH Q H G P
Sbjct: 56 YQ--PIYPQS---QDPYSH---VNDPYSLNPLHAQPQPQ---HPGWPGQ----------- 93
Query: 124 SSCLDEQRRELGCLDAYRR--HDLSLMSHGSQYGMHPDQRLLPGP---SLGLAAAGADDL 178
Q +E G L +R H LS + Y H D LL GP S GL L
Sbjct: 94 -----RQSQESGLLHTHRGLPHQLSGLDPRRDYRRHED--LLHGPHALSSGLGDLSIHSL 146
Query: 179 QGSVEA-----QCGLVLNGQGGVIRRGGTC----------------------VVNPTDLF 211
++E G+ + Q VI++G VVNP ++F
Sbjct: 147 PHAIEEVPHVEDPGINIPDQT-VIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVF 205
Query: 212 CSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDR 271
CSVPGRLSLLSSTSKYKVT+AEV+RRLSPPECLNASLLGG+LRRAKSKNGGR LREKLD+
Sbjct: 206 CSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDK 265
Query: 272 LGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQ 331
+GLNLPAGRRKAANVTLLTSLVEGEA+HLARDFGY CETEFPAKAV E L RQH + EQ
Sbjct: 266 IGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQ 325
Query: 332 TARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAI 391
RK M+LATKQICKEF DLL+QDRSPLG+SRP PIL+ IQ LTHF+LI+HGFG+PA+
Sbjct: 326 VTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAV 385
Query: 392 CAALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLRK 437
CAA++ Q L+E L ++K N + ++ ++ RK
Sbjct: 386 CAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK 431
>gi|194353976 transcription factor AP-2 epsilon (activating enhancer
binding protein 2 epsilon) [Homo sapiens]
Length = 442
Score = 324 bits (831), Expect = 9e-89
Identities = 209/429 (48%), Positives = 252/429 (58%), Gaps = 47/429 (10%)
Query: 39 AYSSSSPLTYS---TTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSL 95
AY + PL ++ T EF PYF + PL + + + P + D Y
Sbjct: 31 AYGPAPPLCHTPAATAAAEFQPPYFPPPYPQPPLPYGQAP-DAAAAFPHLAGDPYG-GLA 88
Query: 96 HHSQQYYQQIHHGEPTDFINLHNARALKSSCLDEQRRELGCLDAYRRHDLSL--MSHGSQ 153
+Q Q P H L R LG LD R + ++ + HG
Sbjct: 89 PLAQPQPPQAAWAAPRAAARAHEE---PPGLLAPPARALG-LDPRRDYATAVPRLLHGLA 144
Query: 154 YGMHPDQRLLPGPSLGL----AAAGADDLQGSVEAQCGLVLNGQGGVIRR---------- 199
G H L LGL AA G +DLQ E L+ VI++
Sbjct: 145 DGAHG----LADAPLGLPGLAAAPGLEDLQAMDEPGMSLL---DQSVIKKVPIPSKASSL 197
Query: 200 -----------GGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASL 248
GG + NP ++FCSVPGRLSLLSSTSKYKVT+ EV+RRLSPPECLNASL
Sbjct: 198 SALSLAKDSLVGG--ITNPGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASL 255
Query: 249 LGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTC 308
LGG+LRRAKSKNGGRCLRE+L+++GLNLPAGRRKAANVTLLTSLVEGEA+HLARDFGY C
Sbjct: 256 LGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVC 315
Query: 309 ETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPIL 368
ETEFPAKA E+L RQH + E +RK M+LA KQICKEF DL++QDRSPLG+SRP IL
Sbjct: 316 ETEFPAKAAAEYLCRQHADPGELHSRKSMLLAAKQICKEFADLMAQDRSPLGNSRPALIL 375
Query: 369 DLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHA 428
+ +Q LTHFSLITHGFG PAICAAL+ FQ L E L L+K G + G+ A
Sbjct: 376 EPGVQSCLTHFSLITHGFGGPAICAALTAFQNYLLESLKGLDKMFLSSVG--SGHGETKA 433
Query: 429 NSEKAPLRK 437
+ + A RK
Sbjct: 434 SEKDAKHRK 442
>gi|4507445 transcription factor AP-2 gamma [Homo sapiens]
Length = 450
Score = 313 bits (802), Expect = 2e-85
Identities = 203/460 (44%), Positives = 257/460 (55%), Gaps = 67/460 (14%)
Query: 11 DAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLH 70
D E RHDGS++ ++ L S YS + PL+++ PYF +Q
Sbjct: 14 DCEDRHDGSSNGN-PRVPHLSSAGQHL--YSPAPPLSHTGVAEYQPPPYFPPPYQQLAYS 70
Query: 71 HQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQ----------------IHHGEPTDFI 114
+ Y H A A ++N LH Q HHG P
Sbjct: 71 QSADPYS--HLGEAY---AAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGRPAGL- 124
Query: 115 NLHNARALKSSCLDEQRRELGCLDAYRRHDLSLMSHG---------SQYGMHP------- 158
L + L++ + +R DAYRR DL L+ H G+H
Sbjct: 125 -LPHLSGLEAGAVSARR------DAYRRSDL-LLPHAHALDAAGLAENLGLHDMPHQMDE 176
Query: 159 -----DQRLLPGPSLGLAAAGADDLQGSVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFCS 213
DQ LL + + + C L G V+NPT++FCS
Sbjct: 177 VQNVDDQHLLLHDQTVIRKGPISMTKNPLNLPCQKELVG----------AVMNPTEVFCS 226
Query: 214 VPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLG 273
VPGRLSLLSSTSKYKVT+AEV+RRLSPPECLNASLLGG+LRRAKSKNGGR LREKLD++G
Sbjct: 227 VPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIG 286
Query: 274 LNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHM-EQKEQT 332
LNLPAGRRKAA+VTLLTSLVEGEA+HLARDF Y CE EFP+K V E+L R H+ + E
Sbjct: 287 LNLPAGRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMA 346
Query: 333 ARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAIC 392
ARK M+LA +Q+CKEF +LLSQDR+P G+SR P+L+ +IQ L+HFSLITHGFG+ AIC
Sbjct: 347 ARKNMLLAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAIC 406
Query: 393 AALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEK 432
AA+S Q + E L ++K ++ N G + EK
Sbjct: 407 AAVSALQNYIKEALIVIDK--SYMNPGDQSPADSNKTLEK 444
>gi|117320531 nuclear factor of kappa light polypeptide gene
enhancer in B-cells 2 isoform a [Homo sapiens]
Length = 900
Score = 33.9 bits (76), Expect = 0.31
Identities = 33/107 (30%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 213 SVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRC---LREKL 269
+VP L + Y V +A R PECL+ + G A + GGR L ++
Sbjct: 588 AVPQLLHMPDFEGLYPVHLAV---RARSPECLDLLVDSGAEVEATERQGGRTALHLATEM 644
Query: 270 DRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKA 316
+ LGL + ANV T LHLA GY T KA
Sbjct: 645 EELGLVTHLVTKLRANVNART-FAGNTPLHLAAGLGYPTLTRLLLKA 690
>gi|117320540 nuclear factor of kappa light polypeptide gene
enhancer in B-cells 2 isoform b [Homo sapiens]
Length = 899
Score = 33.9 bits (76), Expect = 0.31
Identities = 33/107 (30%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 213 SVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRC---LREKL 269
+VP L + Y V +A R PECL+ + G A + GGR L ++
Sbjct: 588 AVPQLLHMPDFEGLYPVHLAV---RARSPECLDLLVDSGAEVEATERQGGRTALHLATEM 644
Query: 270 DRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKA 316
+ LGL + ANV T LHLA GY T KA
Sbjct: 645 EELGLVTHLVTKLRANVNART-FAGNTPLHLAAGLGYPTLTRLLLKA 690
>gi|117320527 nuclear factor of kappa light polypeptide gene
enhancer in B-cells 2 isoform b [Homo sapiens]
Length = 899
Score = 33.9 bits (76), Expect = 0.31
Identities = 33/107 (30%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 213 SVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRC---LREKL 269
+VP L + Y V +A R PECL+ + G A + GGR L ++
Sbjct: 588 AVPQLLHMPDFEGLYPVHLAV---RARSPECLDLLVDSGAEVEATERQGGRTALHLATEM 644
Query: 270 DRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKA 316
+ LGL + ANV T LHLA GY T KA
Sbjct: 645 EELGLVTHLVTKLRANVNART-FAGNTPLHLAAGLGYPTLTRLLLKA 690
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 33.1 bits (74), Expect = 0.53
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 36 STVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTP 87
+T + ++ P+T +T+GT A FSTN T LH H H HP VTP
Sbjct: 1492 ATGSTHTAPPITPTTSGTSQAHSSFSTNKTPTSLHS---HTSSTH-HPEVTP 1539
Score = 29.3 bits (64), Expect = 7.7
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 19 SNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEF 78
+ S RL S T SS+ P+T ++ T P S H P H SF
Sbjct: 1788 ATSSRLPTPFTTHSPPTGTTPISSTGPVTATSFQTTTTYPTPSHPHTTLPTHVPSF---- 1843
Query: 79 QHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFI 114
S VTP +++ H+Q H PT I
Sbjct: 1844 --STSLVTPSTHTVIIPTHTQMATSASIHSMPTGTI 1877
>gi|169217460 PREDICTED: similar to Mucin-6, partial [Homo sapiens]
Length = 350
Score = 32.0 bits (71), Expect = 1.2
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 36 STVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDA 89
+T + ++ P+T +T+GT A+ FST T LH H H HP VTP A
Sbjct: 68 NTGSTHTAPPVTPTTSGTSQAASSFSTAKTSTSLHS---HTSSTH-HPEVTPTA 117
>gi|46094081 development and differentiation enhancing factor 1
[Homo sapiens]
Length = 1129
Score = 30.8 bits (68), Expect = 2.6
Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 315 KAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQR 374
+ +G H++R + ++ +++LA F D++ + P S +PTP D+ +++
Sbjct: 482 REMGVHISRIQSLELDKLGTSELLLAKNVGNNSFNDIMEANL-PSPSPKPTPSSDMTVRK 540
Query: 375 HLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLE 410
+ H F ST L+E+L ++
Sbjct: 541 EYITAKYVDHRFSR----KTCSTSSAKLNELLEAIK 572
>gi|32698730 nuclear fragile X mental retardation protein
interacting protein 2 [Homo sapiens]
Length = 695
Score = 30.8 bits (68), Expect = 2.6
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 58 PYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHG 108
P+ Q HH +Y + HSH + + HH QQ +Q + HG
Sbjct: 19 PHHHPQQQQQQPHHHHHYYFYNHSH--------NHHHHHHHQQPHQYLQHG 61
>gi|59938776 cAMP responsive element binding protein 5 isoform delta
[Homo sapiens]
Length = 369
Score = 30.0 bits (66), Expect = 4.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 13/57 (22%)
Query: 64 HQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIH-HGEPTDFINLHNA 119
HQ P HH Y QH HPA P H Q ++QQ H H ++ H A
Sbjct: 142 HQTLPPHHP---YPHQHQHPAHHP---------HPQPHHQQNHPHHHSHSHLHAHPA 186
>gi|59938774 cAMP responsive element binding protein 5 isoform beta
[Homo sapiens]
Length = 501
Score = 30.0 bits (66), Expect = 4.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 13/57 (22%)
Query: 64 HQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIH-HGEPTDFINLHNA 119
HQ P HH Y QH HPA P H Q ++QQ H H ++ H A
Sbjct: 274 HQTLPPHHP---YPHQHQHPAHHP---------HPQPHHQQNHPHHHSHSHLHAHPA 318
>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
[Homo sapiens]
Length = 475
Score = 30.0 bits (66), Expect = 4.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 13/57 (22%)
Query: 64 HQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIH-HGEPTDFINLHNA 119
HQ P HH Y QH HPA P H Q ++QQ H H ++ H A
Sbjct: 248 HQTLPPHHP---YPHQHQHPAHHP---------HPQPHHQQNHPHHHSHSHLHAHPA 292
>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
[Homo sapiens]
Length = 508
Score = 30.0 bits (66), Expect = 4.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 13/57 (22%)
Query: 64 HQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIH-HGEPTDFINLHNA 119
HQ P HH Y QH HPA P H Q ++QQ H H ++ H A
Sbjct: 281 HQTLPPHHP---YPHQHQHPAHHP---------HPQPHHQQNHPHHHSHSHLHAHPA 325
>gi|73747840 LON peptidase N-terminal domain and ring finger 3
isoform 1 [Homo sapiens]
Length = 759
Score = 29.6 bits (65), Expect = 5.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 5 FPGLVHDAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNH 64
FPG +++RH+G+ YR Q+ N V + + L YS + YF+
Sbjct: 237 FPGPARASQLRHEGNRLYRERQVEAALLKYNEAVKLAPNDHLLYSNR----SQIYFTLES 292
Query: 65 QYTPLH 70
LH
Sbjct: 293 HENALH 298
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 29.6 bits (65), Expect = 5.9
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 50 TTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQ 104
T G A+P +H + HH H H H A+ LN QQ QQ
Sbjct: 13 TVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHAL---QQQLNQFQQQQQQQQQ 64
>gi|37622896 LON peptidase N-terminal domain and ring finger 3
isoform 2 [Homo sapiens]
Length = 718
Score = 29.6 bits (65), Expect = 5.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 5 FPGLVHDAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNH 64
FPG +++RH+G+ YR Q+ N V + + L YS + YF+
Sbjct: 237 FPGPARASQLRHEGNRLYRERQVEAALLKYNEAVKLAPNDHLLYSNR----SQIYFTLES 292
Query: 65 QYTPLH 70
LH
Sbjct: 293 HENALH 298
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 29.6 bits (65), Expect = 5.9
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 50 TTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQ 104
T G A+P +H + HH H H H A+ LN QQ QQ
Sbjct: 13 TVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHAL---QQQLNQFQQQQQQQQQ 64
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 29.6 bits (65), Expect = 5.9
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 50 TTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQ 104
T G A+P +H + HH H H H A+ LN QQ QQ
Sbjct: 13 TVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHAL---QQQLNQFQQQQQQQQQ 64
>gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens]
Length = 1114
Score = 29.3 bits (64), Expect = 7.7
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 58 PYFSTNHQYTPLHHQ---SFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEP 110
PY +H + P H Q +H+ HPA A+ L + + HHG+P
Sbjct: 1039 PYHHHHHHHPPQHIQHAHQYHHGPHGGHPAYGAHAHGHPPLPSAHVGHTVHHHGQP 1094
>gi|27894361 nuclear receptor subfamily 4, group A, member 3 isoform
b [Homo sapiens]
Length = 637
Score = 29.3 bits (64), Expect = 7.7
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 61 STNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNS-LHHSQQYYQQIHHGEPT 111
S +H + HH H++ QH P++ P + + L + Y++Q PT
Sbjct: 104 SYHHHHHHHHHHHHHHQQQHQQPSIPPASSPEDEVLPSTSMYFKQSPPSTPT 155
>gi|27894359 nuclear receptor subfamily 4, group A, member 3 isoform
c [Homo sapiens]
Length = 443
Score = 29.3 bits (64), Expect = 7.7
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 61 STNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNS-LHHSQQYYQQIHHGEPT 111
S +H + HH H++ QH P++ P + + L + Y++Q PT
Sbjct: 93 SYHHHHHHHHHHHHHHQQQHQQPSIPPASSPEDEVLPSTSMYFKQSPPSTPT 144
>gi|27894357 nuclear receptor subfamily 4, group A, member 3 isoform
a [Homo sapiens]
Length = 626
Score = 29.3 bits (64), Expect = 7.7
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 61 STNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNS-LHHSQQYYQQIHHGEPT 111
S +H + HH H++ QH P++ P + + L + Y++Q PT
Sbjct: 93 SYHHHHHHHHHHHHHHQQQHQQPSIPPASSPEDEVLPSTSMYFKQSPPSTPT 144
>gi|27894355 nuclear receptor subfamily 4, group A, member 3 isoform
a [Homo sapiens]
Length = 626
Score = 29.3 bits (64), Expect = 7.7
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 61 STNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNS-LHHSQQYYQQIHHGEPT 111
S +H + HH H++ QH P++ P + + L + Y++Q PT
Sbjct: 93 SYHHHHHHHHHHHHHHQQQHQQPSIPPASSPEDEVLPSTSMYFKQSPPSTPT 144
>gi|221316609 sperm-associated cation channel 1 [Homo sapiens]
Length = 780
Score = 28.9 bits (63), Expect = 10.0
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Query: 7 GLVHDAEIRHDG-SNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQ 65
G H ++ H G S + Q G +S + SS +Y +++ S Y +H
Sbjct: 216 GWPHHHQVHHHGRSRHHEAHQHG--KSPHHGETISPHSSVGSYQRGISDYHSEYHQGDHH 273
Query: 66 YTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQ-QIHHG 108
+ HH + QH + + H + Y+Q Q HHG
Sbjct: 274 PSEYHHGDHPHHTQHHY----------HQTHRHRDYHQHQDHHG 307
>gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens]
Length = 561
Score = 28.9 bits (63), Expect = 10.0
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 285 NVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKM 337
NV TS + L R G T +FP K EH R+ +E+KE+ +K++
Sbjct: 191 NVCHSTSSAAADRLTKQRKVGKTYPQQFPKKLKKEH-DREELERKEKQYKKEV 242
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,377,892
Number of Sequences: 37866
Number of extensions: 854833
Number of successful extensions: 2372
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2323
Number of HSP's gapped (non-prelim): 60
length of query: 452
length of database: 18,247,518
effective HSP length: 106
effective length of query: 346
effective length of database: 14,233,722
effective search space: 4924867812
effective search space used: 4924867812
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.