Guide to the Human Genome
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Name: SLC4A1 Sequence: fasta or formatted (911aa) NCBI GI: 4507021
Description:

solute carrier family 4, anion exchanger, member 1

Referenced in:

Hematopoiesis and Erythrocytes
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         63           3
 C cysteine            0.5          5           1
 D aspartate           4.5         41           2
 E glutamate           7.1         65           3
 F phenylalanine       6.0         55           3
 G glycine             6.8         62           2
 H histidine           2.0         18           1
 I isoleucine          5.4         49           2
 K lysine              3.2         29           1
 L leucine            14.9        136           3
 M methionine          2.6         24           2
 N asparagine          1.6         15           1
 P proline             6.1         56           2
 Q glutamine           4.5         41           2
 R arginine            4.9         45           3
 S serine              6.4         58           2
 T threonine           4.7         43           2
 V valine              7.9         72           2
 W tryptophan          1.2         11           1
 Y tyrosine            2.5         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 4, anion exchanger, member 1 [H... 
SLC4A2                0.557   solute carrier family 4, anion exchanger, member 2 ...
SLC4A3                0.525   solute carrier family 4, anion exchanger, member 3 ...
SLC4A3                0.525   solute carrier family 4, anion exchanger, member 3 ...
SLC4A8                0.307   solute carrier family 4, sodium bicarbonate cotransp...
SLC4A8                0.306   solute carrier family 4, sodium bicarbonate cotransp...
SLC4A4                0.305   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A4                0.305   solute carrier family 4, sodium bicarbonate cotranspo...
SLC4A4                0.305   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A10               0.304   solute carrier family 4, sodium bicarbonate transpo...
SLC4A5                0.288   sodium bicarbonate transporter 4 isoform c 
SLC4A5                0.282   sodium bicarbonate transporter 4 isoform a 
SLC4A7                0.274   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A9                0.266   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A11               0.124   solute carrier family 4 member 11 
CT47A1                0.007   cancer/testis antigen family 47, member A1 
CT47A2                0.007   cancer/testis antigen family 47, member A2 
CT47A3                0.007   cancer/testis antigen family 47, member A3 
CT47A4                0.007   cancer/testis antigen family 47, member A4 
CT47A5                0.007   cancer/testis antigen family 47, member A5 
CT47A6                0.007   cancer/testis antigen family 47, member A6 
CT47A7                0.007   cancer/testis antigen family 47, member A7 
CT47A8                0.007   cancer/testis antigen family 47, member A8 
CT47A9                0.007   cancer/testis antigen family 47, member A9 
CT47A10               0.007   cancer/testis antigen family 47, member A10 
CT47A11               0.007   cancer/testis antigen family 47, member A11 
ICMT                  0.007   isoprenylcysteine carboxyl methyltransferase 
SLC18A1               0.006   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.006   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.006   solute carrier family 18 (vesicular monoamine), mem...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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