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Search of human proteins with 15042941
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15042941 melanoma antigen, family H, 1 protein [Homo
sapiens]
(219 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15042941 melanoma antigen, family H, 1 protein [Homo sapiens] 443 e-125
gi|20162572 necdin-like 2 [Homo sapiens] 132 2e-31
gi|89276766 trophinin isoform 5 [Homo sapiens] 129 3e-30
gi|29540551 trophinin isoform 2 [Homo sapiens] 129 3e-30
gi|29540541 trophinin isoform 2 [Homo sapiens] 129 3e-30
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 129 3e-30
gi|29171705 melanoma antigen family D, 2 [Homo sapiens] 129 3e-30
gi|19387846 melanoma antigen family D, 2 [Homo sapiens] 129 3e-30
gi|41350320 melanoma antigen family D, 2 [Homo sapiens] 129 3e-30
gi|29826296 melanoma antigen family F, 1 [Homo sapiens] 123 1e-28
gi|169216998 PREDICTED: similar to hCG1811022 [Homo sapiens] 121 5e-28
gi|239752285 PREDICTED: similar to hCG1811022 [Homo sapiens] 121 5e-28
gi|239746796 PREDICTED: similar to hCG1811022 [Homo sapiens] 121 5e-28
gi|52632381 melanoma antigen family D, 1 isoform a [Homo sapiens] 116 1e-26
gi|52632379 melanoma antigen family D, 1 isoform b [Homo sapiens] 116 1e-26
gi|52632377 melanoma antigen family D, 1 isoform b [Homo sapiens] 116 1e-26
gi|4505085 melanoma antigen family B, 4 [Homo sapiens] 116 1e-26
gi|29337296 melanoma antigen family D, 4B isoform 2 [Homo sapiens] 116 1e-26
gi|29337294 melanoma antigen family D, 4B isoform 1 [Homo sapiens] 116 1e-26
gi|29337292 melanoma antigen family D, 4B isoform 1 [Homo sapiens] 116 1e-26
gi|149274614 melanoma antigen family D, 4 [Homo sapiens] 116 1e-26
gi|169216977 PREDICTED: melanoma antigen family B, 17 [Homo sapi... 114 5e-26
gi|169216191 PREDICTED: melanoma antigen family B, 17 [Homo sapi... 114 5e-26
gi|169216802 PREDICTED: melanoma antigen family B, 17 [Homo sapi... 114 5e-26
gi|4505349 necdin [Homo sapiens] 114 6e-26
gi|29171711 melanoma antigen family B, 1 [Homo sapiens] 114 6e-26
gi|29171709 melanoma antigen family B, 1 [Homo sapiens] 114 6e-26
gi|29171707 melanoma antigen family B, 1 [Homo sapiens] 114 6e-26
gi|29171714 melanoma antigen family B, 3 [Homo sapiens] 114 8e-26
gi|27734781 melanoma antigen family B, 18 [Homo sapiens] 114 8e-26
>gi|15042941 melanoma antigen, family H, 1 protein [Homo sapiens]
Length = 219
Score = 443 bits (1140), Expect = e-125
Identities = 219/219 (100%), Positives = 219/219 (100%)
Query: 1 MPRGRKSRRRRNARAAEENRNNRKIQASEASETPMAASVVASTPEDDLSGPEEDPSTPEE 60
MPRGRKSRRRRNARAAEENRNNRKIQASEASETPMAASVVASTPEDDLSGPEEDPSTPEE
Sbjct: 1 MPRGRKSRRRRNARAAEENRNNRKIQASEASETPMAASVVASTPEDDLSGPEEDPSTPEE 60
Query: 61 ASTTPEEASSTAQAQKPSVPRSNFQGTKKSLLMSILALIFIMGNSAKEALVWKVLGKLGM 120
ASTTPEEASSTAQAQKPSVPRSNFQGTKKSLLMSILALIFIMGNSAKEALVWKVLGKLGM
Sbjct: 61 ASTTPEEASSTAQAQKPSVPRSNFQGTKKSLLMSILALIFIMGNSAKEALVWKVLGKLGM 120
Query: 121 QPGRQHSIFGDPKKIVTEEFVRRGYLIYKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFV 180
QPGRQHSIFGDPKKIVTEEFVRRGYLIYKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFV
Sbjct: 121 QPGRQHSIFGDPKKIVTEEFVRRGYLIYKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFV 180
Query: 181 ARVRNRCSKDWPCNYDWDSDDDAEVEAILNSGARGYSAP 219
ARVRNRCSKDWPCNYDWDSDDDAEVEAILNSGARGYSAP
Sbjct: 181 ARVRNRCSKDWPCNYDWDSDDDAEVEAILNSGARGYSAP 219
>gi|20162572 necdin-like 2 [Homo sapiens]
Length = 304
Score = 132 bits (332), Expect = 2e-31
Identities = 60/112 (53%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
Query: 85 QGTKKS-LLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRR 143
QGT + LLM +L LIF+ GN+ KE W L +LG+ P ++H IFGDPKK++TE+FVR+
Sbjct: 171 QGTPTTGLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQ 230
Query: 144 GYLIYKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNY 195
YL Y+ +P + PV+YEF WGPR ++E+SK+KV+ FVA+V N+ KDWP Y
Sbjct: 231 RYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPAQY 282
>gi|89276766 trophinin isoform 5 [Homo sapiens]
Length = 1431
Score = 129 bits (323), Expect = 3e-30
Identities = 58/108 (53%), Positives = 82/108 (75%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
K LLM IL++IF+ GN A EA++W+VL KLG++PG +HS+FG+ +K++T+EFV++ YL
Sbjct: 532 KLGLLMVILSVIFMNGNKASEAVIWEVLRKLGLRPGVRHSLFGEVRKLITDEFVKQKYLE 591
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNY 195
YK VP S P EYEFFWG R++ E+SK+KV+ F RV+ + KDW Y
Sbjct: 592 YKRVPNSRPPEYEFFWGLRSYHETSKMKVLKFACRVQKKDPKDWAVQY 639
>gi|29540551 trophinin isoform 2 [Homo sapiens]
Length = 706
Score = 129 bits (323), Expect = 3e-30
Identities = 58/108 (53%), Positives = 82/108 (75%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
K LLM IL++IF+ GN A EA++W+VL KLG++PG +HS+FG+ +K++T+EFV++ YL
Sbjct: 532 KLGLLMVILSVIFMNGNKASEAVIWEVLRKLGLRPGVRHSLFGEVRKLITDEFVKQKYLE 591
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNY 195
YK VP S P EYEFFWG R++ E+SK+KV+ F RV+ + KDW Y
Sbjct: 592 YKRVPNSRPPEYEFFWGLRSYHETSKMKVLKFACRVQKKDPKDWAVQY 639
>gi|29540541 trophinin isoform 2 [Homo sapiens]
Length = 706
Score = 129 bits (323), Expect = 3e-30
Identities = 58/108 (53%), Positives = 82/108 (75%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
K LLM IL++IF+ GN A EA++W+VL KLG++PG +HS+FG+ +K++T+EFV++ YL
Sbjct: 532 KLGLLMVILSVIFMNGNKASEAVIWEVLRKLGLRPGVRHSLFGEVRKLITDEFVKQKYLE 591
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNY 195
YK VP S P EYEFFWG R++ E+SK+KV+ F RV+ + KDW Y
Sbjct: 592 YKRVPNSRPPEYEFFWGLRSYHETSKMKVLKFACRVQKKDPKDWAVQY 639
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 129 bits (323), Expect = 3e-30
Identities = 58/118 (49%), Positives = 87/118 (73%)
Query: 86 GTKKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGY 145
G K LLM IL IF+ GN AKEA +W++L ++G+Q R+ SIFG+PK++++ EFV + Y
Sbjct: 578 GPKMGLLMMILGQIFLNGNQAKEAEIWEMLWRMGVQRERRLSIFGNPKRLLSVEFVWQRY 637
Query: 146 LIYKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDA 203
L Y+PV PVEYEFFWGPR+H+E++K+K++ F+A++ N+ DWP Y+ ++DA
Sbjct: 638 LDYRPVTDCKPVEYEFFWGPRSHLETTKMKILKFMAKIYNKDPMDWPEKYNEALEEDA 695
Score = 102 bits (253), Expect = 3e-22
Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
Query: 77 PSVPRSNFQGTKKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIV 136
P+ P +NF LM +L+ IFIMGN A+E+ VW L LG+Q GR+H ++
Sbjct: 830 PNRPGNNF-------LMQVLSFIFIMGNHARESAVWAFLRGLGVQAGRKH--------VI 874
Query: 137 TEEFVRRGYLIYKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYD 196
T ++ + Y+ VP S PV+YEF WGPRA +E+SK+K + +VAR+ + +DWP Y
Sbjct: 875 TCRYLSQRYIDSLRVPDSDPVQYEFVWGPRARLETSKMKALRYVARIHRKEPQDWPQQYR 934
Query: 197 WDSDDDA 203
+D+A
Sbjct: 935 EAMEDEA 941
>gi|29171705 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 129 bits (323), Expect = 3e-30
Identities = 63/147 (42%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 70 STAQAQKPSVPRSNFQGTKKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIF 129
ST + + + K LLM +L++IF+ GN + EA++W+VL KLG++PG HS+F
Sbjct: 350 STLEPTDAGILGTTKDSPKLGLLMVLLSIIFMNGNRSSEAVIWEVLRKLGLRPGIHHSLF 409
Query: 130 GDPKKIVTEEFVRRGYLIYKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSK 189
GD KK++T+EFV++ YL Y VP S+P EYEFFWG R++ E+SK+KV+ F +V+ + K
Sbjct: 410 GDVKKLITDEFVKQKYLDYARVPNSNPPEYEFFWGLRSYYETSKMKVLKFACKVQKKDPK 469
Query: 190 DWPCNY--DWDSDDDAEVEAILNSGAR 214
+W Y ++D A EA + AR
Sbjct: 470 EWAAQYREAMEADLKAAAEAAAEAKAR 496
>gi|19387846 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 129 bits (323), Expect = 3e-30
Identities = 63/147 (42%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 70 STAQAQKPSVPRSNFQGTKKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIF 129
ST + + + K LLM +L++IF+ GN + EA++W+VL KLG++PG HS+F
Sbjct: 350 STLEPTDAGILGTTKDSPKLGLLMVLLSIIFMNGNRSSEAVIWEVLRKLGLRPGIHHSLF 409
Query: 130 GDPKKIVTEEFVRRGYLIYKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSK 189
GD KK++T+EFV++ YL Y VP S+P EYEFFWG R++ E+SK+KV+ F +V+ + K
Sbjct: 410 GDVKKLITDEFVKQKYLDYARVPNSNPPEYEFFWGLRSYYETSKMKVLKFACKVQKKDPK 469
Query: 190 DWPCNY--DWDSDDDAEVEAILNSGAR 214
+W Y ++D A EA + AR
Sbjct: 470 EWAAQYREAMEADLKAAAEAAAEAKAR 496
>gi|41350320 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 129 bits (323), Expect = 3e-30
Identities = 63/147 (42%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 70 STAQAQKPSVPRSNFQGTKKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIF 129
ST + + + K LLM +L++IF+ GN + EA++W+VL KLG++PG HS+F
Sbjct: 350 STLEPTDAGILGTTKDSPKLGLLMVLLSIIFMNGNRSSEAVIWEVLRKLGLRPGIHHSLF 409
Query: 130 GDPKKIVTEEFVRRGYLIYKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSK 189
GD KK++T+EFV++ YL Y VP S+P EYEFFWG R++ E+SK+KV+ F +V+ + K
Sbjct: 410 GDVKKLITDEFVKQKYLDYARVPNSNPPEYEFFWGLRSYYETSKMKVLKFACKVQKKDPK 469
Query: 190 DWPCNY--DWDSDDDAEVEAILNSGAR 214
+W Y ++D A EA + AR
Sbjct: 470 EWAAQYREAMEADLKAAAEAAAEAKAR 496
>gi|29826296 melanoma antigen family F, 1 [Homo sapiens]
Length = 307
Score = 123 bits (309), Expect = 1e-28
Identities = 55/119 (46%), Positives = 86/119 (72%)
Query: 86 GTKKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGY 145
G + LLM IL LI++ GNSA+EA VW++L +LG+QP + H +FG PK+++ E+FV++ Y
Sbjct: 164 GPRLGLLMMILGLIYMRGNSAREAQVWEMLRRLGVQPSKYHFLFGYPKRLIMEDFVQQRY 223
Query: 146 LIYKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDAE 204
L Y+ VP ++P EYEF WGPR+++E SK++V+ FVA++ + + WP Y D+A+
Sbjct: 224 LSYRRVPHTNPPEYEFSWGPRSNLEISKMEVLGFVAKLHKKEPQHWPVQYREALADEAD 282
>gi|169216998 PREDICTED: similar to hCG1811022 [Homo sapiens]
Length = 334
Score = 121 bits (303), Expect = 5e-28
Identities = 58/129 (44%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
+ LLM+IL +IF GN A E +W+VL +G+ GR+H IFG+PKKI+T++FVR YL
Sbjct: 188 RTGLLMTILGVIFTNGNCATEEQIWQVLNVMGLYEGRRHFIFGEPKKIITQDFVRENYLQ 247
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDAEVEA 207
Y+ VP S P ++F WGPRAHVE++K+KV+ F+A++ N +P Y ++ D E A
Sbjct: 248 YQQVPDSDPPRHQFLWGPRAHVETTKMKVLEFLAKIHNTVPSAFPTWYK-EALRDEEERA 306
Query: 208 ILNSGARGY 216
+ AR +
Sbjct: 307 QVRLAARAH 315
>gi|239752285 PREDICTED: similar to hCG1811022 [Homo sapiens]
Length = 334
Score = 121 bits (303), Expect = 5e-28
Identities = 58/129 (44%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
+ LLM+IL +IF GN A E +W+VL +G+ GR+H IFG+PKKI+T++FVR YL
Sbjct: 188 RTGLLMTILGVIFTNGNCATEEQIWQVLNVMGLYEGRRHFIFGEPKKIITQDFVRENYLQ 247
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDAEVEA 207
Y+ VP S P ++F WGPRAHVE++K+KV+ F+A++ N +P Y ++ D E A
Sbjct: 248 YQQVPDSDPPRHQFLWGPRAHVETTKMKVLEFLAKIHNTVPSAFPTWYK-EALRDEEERA 306
Query: 208 ILNSGARGY 216
+ AR +
Sbjct: 307 QVRLAARAH 315
>gi|239746796 PREDICTED: similar to hCG1811022 [Homo sapiens]
Length = 334
Score = 121 bits (303), Expect = 5e-28
Identities = 58/129 (44%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
+ LLM+IL +IF GN A E +W+VL +G+ GR+H IFG+PKKI+T++FVR YL
Sbjct: 188 RTGLLMTILGVIFTNGNCATEEQIWQVLNVMGLYEGRRHFIFGEPKKIITQDFVRENYLQ 247
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDAEVEA 207
Y+ VP S P ++F WGPRAHVE++K+KV+ F+A++ N +P Y ++ D E A
Sbjct: 248 YQQVPDSDPPRHQFLWGPRAHVETTKMKVLEFLAKIHNTVPSAFPTWYK-EALRDEEERA 306
Query: 208 ILNSGARGY 216
+ AR +
Sbjct: 307 QVRLAARAH 315
>gi|52632381 melanoma antigen family D, 1 isoform a [Homo sapiens]
Length = 834
Score = 116 bits (291), Expect = 1e-26
Identities = 58/133 (43%), Positives = 87/133 (65%), Gaps = 6/133 (4%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
K LL+ IL +IF+ GN A EA++W+ L K+G++PG +H + GD +K++T EFV++ YL
Sbjct: 615 KLGLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPLLGDLRKLLTYEFVKQKYLD 674
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNY------DWDSDD 201
Y+ VP S+P EYEF WG R++ E+SK+KV+ F+A V+ R +DW + D+ D
Sbjct: 675 YRRVPNSNPPEYEFLWGLRSYHETSKMKVLRFIAEVQKRDPRDWTAQFMEAADEALDALD 734
Query: 202 DAEVEAILNSGAR 214
A EA + AR
Sbjct: 735 AAAAEAEARAEAR 747
>gi|52632379 melanoma antigen family D, 1 isoform b [Homo sapiens]
Length = 778
Score = 116 bits (291), Expect = 1e-26
Identities = 58/133 (43%), Positives = 87/133 (65%), Gaps = 6/133 (4%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
K LL+ IL +IF+ GN A EA++W+ L K+G++PG +H + GD +K++T EFV++ YL
Sbjct: 559 KLGLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPLLGDLRKLLTYEFVKQKYLD 618
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNY------DWDSDD 201
Y+ VP S+P EYEF WG R++ E+SK+KV+ F+A V+ R +DW + D+ D
Sbjct: 619 YRRVPNSNPPEYEFLWGLRSYHETSKMKVLRFIAEVQKRDPRDWTAQFMEAADEALDALD 678
Query: 202 DAEVEAILNSGAR 214
A EA + AR
Sbjct: 679 AAAAEAEARAEAR 691
>gi|52632377 melanoma antigen family D, 1 isoform b [Homo sapiens]
Length = 778
Score = 116 bits (291), Expect = 1e-26
Identities = 58/133 (43%), Positives = 87/133 (65%), Gaps = 6/133 (4%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
K LL+ IL +IF+ GN A EA++W+ L K+G++PG +H + GD +K++T EFV++ YL
Sbjct: 559 KLGLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPLLGDLRKLLTYEFVKQKYLD 618
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNY------DWDSDD 201
Y+ VP S+P EYEF WG R++ E+SK+KV+ F+A V+ R +DW + D+ D
Sbjct: 619 YRRVPNSNPPEYEFLWGLRSYHETSKMKVLRFIAEVQKRDPRDWTAQFMEAADEALDALD 678
Query: 202 DAEVEAILNSGAR 214
A EA + AR
Sbjct: 679 AAAAEAEARAEAR 691
>gi|4505085 melanoma antigen family B, 4 [Homo sapiens]
Length = 346
Score = 116 bits (291), Expect = 1e-26
Identities = 50/117 (42%), Positives = 80/117 (68%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
+ LLM +L++IF+ GN A+E +W+ L LG+ G++H IFG+P+K++T++ V+ YL
Sbjct: 197 RNGLLMPLLSVIFLNGNCAREEEIWEFLNMLGIYDGKRHLIFGEPRKLITQDLVQEKYLE 256
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDAE 204
Y+ VP S P Y+F WGPRAH E+SK+KV+ F+A+V + ++P Y+ D+ E
Sbjct: 257 YQQVPNSDPPRYQFLWGPRAHAETSKMKVLEFLAKVNDTTPNNFPLLYEEALRDEEE 313
>gi|29337296 melanoma antigen family D, 4B isoform 2 [Homo sapiens]
Length = 739
Score = 116 bits (291), Expect = 1e-26
Identities = 52/114 (45%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Query: 90 SLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLIYK 149
SLL+ IL +IF+ GN A EA++W+ L K+G++PG +H GD +K++T++FV++ YL YK
Sbjct: 503 SLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPFLGDLRKLITDDFVKQKYLEYK 562
Query: 150 PVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDA 203
+P S+P EYEF WG RA E+SK++V+ F+A+ +NR ++W ++ ++ DDA
Sbjct: 563 KIPNSNPPEYEFLWGLRARHETSKMRVLRFIAQNQNRDPREWKAHF-LEAVDDA 615
Score = 28.5 bits (62), Expect = 4.7
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 24 KIQASEASETPMAASVVASTPEDDLSGPEEDPSTPEEASTTPEEASSTAQAQKPS 78
++ + T AA TPE L+ P+ PE +++AQ+Q S
Sbjct: 141 QVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSQTGS 195
>gi|29337294 melanoma antigen family D, 4B isoform 1 [Homo sapiens]
Length = 741
Score = 116 bits (291), Expect = 1e-26
Identities = 52/114 (45%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Query: 90 SLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLIYK 149
SLL+ IL +IF+ GN A EA++W+ L K+G++PG +H GD +K++T++FV++ YL YK
Sbjct: 503 SLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPFLGDLRKLITDDFVKQKYLEYK 562
Query: 150 PVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDA 203
+P S+P EYEF WG RA E+SK++V+ F+A+ +NR ++W ++ ++ DDA
Sbjct: 563 KIPNSNPPEYEFLWGLRARHETSKMRVLRFIAQNQNRDPREWKAHF-LEAVDDA 615
Score = 28.5 bits (62), Expect = 4.7
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 24 KIQASEASETPMAASVVASTPEDDLSGPEEDPSTPEEASTTPEEASSTAQAQKPS 78
++ + T AA TPE L+ P+ PE +++AQ+Q S
Sbjct: 141 QVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSQTGS 195
>gi|29337292 melanoma antigen family D, 4B isoform 1 [Homo sapiens]
Length = 741
Score = 116 bits (291), Expect = 1e-26
Identities = 52/114 (45%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Query: 90 SLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLIYK 149
SLL+ IL +IF+ GN A EA++W+ L K+G++PG +H GD +K++T++FV++ YL YK
Sbjct: 503 SLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPFLGDLRKLITDDFVKQKYLEYK 562
Query: 150 PVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDA 203
+P S+P EYEF WG RA E+SK++V+ F+A+ +NR ++W ++ ++ DDA
Sbjct: 563 KIPNSNPPEYEFLWGLRARHETSKMRVLRFIAQNQNRDPREWKAHF-LEAVDDA 615
Score = 28.5 bits (62), Expect = 4.7
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 24 KIQASEASETPMAASVVASTPEDDLSGPEEDPSTPEEASTTPEEASSTAQAQKPS 78
++ + T AA TPE L+ P+ PE +++AQ+Q S
Sbjct: 141 QVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSQTGS 195
>gi|149274614 melanoma antigen family D, 4 [Homo sapiens]
Length = 739
Score = 116 bits (291), Expect = 1e-26
Identities = 52/114 (45%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Query: 90 SLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLIYK 149
SLL+ IL +IF+ GN A EA++W+ L K+G++PG +H GD +K++T++FV++ YL YK
Sbjct: 503 SLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPFLGDLRKLITDDFVKQKYLEYK 562
Query: 150 PVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDA 203
+P S+P EYEF WG RA E+SK++V+ F+A+ +NR ++W ++ ++ DDA
Sbjct: 563 KIPNSNPPEYEFLWGLRARHETSKMRVLRFIAQNQNRDPREWKAHF-LEAVDDA 615
Score = 28.5 bits (62), Expect = 4.7
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 24 KIQASEASETPMAASVVASTPEDDLSGPEEDPSTPEEASTTPEEASSTAQAQKPS 78
++ + T AA TPE L+ P+ PE +++AQ+Q S
Sbjct: 141 QVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSQTGS 195
>gi|169216977 PREDICTED: melanoma antigen family B, 17 [Homo
sapiens]
Length = 457
Score = 114 bits (286), Expect = 5e-26
Identities = 54/127 (42%), Positives = 81/127 (63%), Gaps = 3/127 (2%)
Query: 91 LLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLIYKP 150
LLM +L+ IF+ GN A E +W+ L LGM GR+H I+G+P+++VT++ VR GYL Y+
Sbjct: 322 LLMVLLSTIFMHGNRATEEEMWECLNALGMYKGRKHFIYGEPQELVTKDLVREGYLEYQQ 381
Query: 151 VPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYD---WDSDDDAEVEA 207
VP S P YEF WGPRA E+SK+KV+ FVA++ + + + Y+ + ++ A A
Sbjct: 382 VPSSDPPRYEFLWGPRARAETSKMKVLEFVAKLNDTVASTYKSRYEEALREEEEQARARA 441
Query: 208 ILNSGAR 214
+ AR
Sbjct: 442 VARDSAR 448
Score = 32.7 bits (73), Expect = 0.25
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 1 MPRGRKSRR-----RRNARAAEENRNNRKIQASEASETPMAASVVASTPEDDLSG---PE 52
MPRG+ S+R RR AR ++ + A+E + P ++S +P P+
Sbjct: 122 MPRGQASKRRAREKRRQARGEDQCLGGAQATAAEKEKLPSSSSPACQSPPQSFPNAGIPQ 181
Query: 53 ED-----PSTPEEASTTPEEASSTAQAQKPSVPRSNFQGTKKS 90
E PS+P A + + A+ QK P S F G S
Sbjct: 182 ESQRASYPSSPASA-VSLTSSDEGAKGQKGESPNS-FHGPSSS 222
>gi|169216191 PREDICTED: melanoma antigen family B, 17 [Homo
sapiens]
Length = 457
Score = 114 bits (286), Expect = 5e-26
Identities = 54/127 (42%), Positives = 81/127 (63%), Gaps = 3/127 (2%)
Query: 91 LLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLIYKP 150
LLM +L+ IF+ GN A E +W+ L LGM GR+H I+G+P+++VT++ VR GYL Y+
Sbjct: 322 LLMVLLSTIFMHGNRATEEEMWECLNALGMYKGRKHFIYGEPQELVTKDLVREGYLEYQQ 381
Query: 151 VPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYD---WDSDDDAEVEA 207
VP S P YEF WGPRA E+SK+KV+ FVA++ + + + Y+ + ++ A A
Sbjct: 382 VPSSDPPRYEFLWGPRARAETSKMKVLEFVAKLNDTVASTYKSRYEEALREEEEQARARA 441
Query: 208 ILNSGAR 214
+ AR
Sbjct: 442 VARDSAR 448
Score = 32.7 bits (73), Expect = 0.25
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 1 MPRGRKSRR-----RRNARAAEENRNNRKIQASEASETPMAASVVASTPEDDLSG---PE 52
MPRG+ S+R RR AR ++ + A+E + P ++S +P P+
Sbjct: 122 MPRGQASKRRAREKRRQARGEDQCLGGAQATAAEKEKLPSSSSPACQSPPQSFPNAGIPQ 181
Query: 53 ED-----PSTPEEASTTPEEASSTAQAQKPSVPRSNFQGTKKS 90
E PS+P A + + A+ QK P S F G S
Sbjct: 182 ESQRASYPSSPASA-VSLTSSDEGAKGQKGESPNS-FHGPSSS 222
>gi|169216802 PREDICTED: melanoma antigen family B, 17 [Homo
sapiens]
Length = 457
Score = 114 bits (286), Expect = 5e-26
Identities = 54/127 (42%), Positives = 81/127 (63%), Gaps = 3/127 (2%)
Query: 91 LLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLIYKP 150
LLM +L+ IF+ GN A E +W+ L LGM GR+H I+G+P+++VT++ VR GYL Y+
Sbjct: 322 LLMVLLSTIFMHGNRATEEEMWECLNALGMYKGRKHFIYGEPQELVTKDLVREGYLEYQQ 381
Query: 151 VPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYD---WDSDDDAEVEA 207
VP S P YEF WGPRA E+SK+KV+ FVA++ + + + Y+ + ++ A A
Sbjct: 382 VPSSDPPRYEFLWGPRARAETSKMKVLEFVAKLNDTVASTYKSRYEEALREEEEQARARA 441
Query: 208 ILNSGAR 214
+ AR
Sbjct: 442 VARDSAR 448
Score = 32.7 bits (73), Expect = 0.25
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 1 MPRGRKSRR-----RRNARAAEENRNNRKIQASEASETPMAASVVASTPEDDLSG---PE 52
MPRG+ S+R RR AR ++ + A+E + P ++S +P P+
Sbjct: 122 MPRGQASKRRAREKRRQARGEDQCLGGAQATAAEKEKLPSSSSPACQSPPQSFPNAGIPQ 181
Query: 53 ED-----PSTPEEASTTPEEASSTAQAQKPSVPRSNFQGTKKS 90
E PS+P A + + A+ QK P S F G S
Sbjct: 182 ESQRASYPSSPASA-VSLTSSDEGAKGQKGESPNS-FHGPSSS 222
>gi|4505349 necdin [Homo sapiens]
Length = 321
Score = 114 bits (285), Expect = 6e-26
Identities = 52/105 (49%), Positives = 74/105 (70%)
Query: 91 LLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLIYKP 150
LL+ IL+LI++ G A+E+ VW VL LG++P ++HS FGD +K++TEEFV+ YL Y+
Sbjct: 190 LLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQR 249
Query: 151 VPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNY 195
VP P EYEFFWG RA E +K+++M F+ARV + + WP Y
Sbjct: 250 VPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRY 294
>gi|29171711 melanoma antigen family B, 1 [Homo sapiens]
Length = 347
Score = 114 bits (285), Expect = 6e-26
Identities = 49/124 (39%), Positives = 80/124 (64%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
+ LLM +L +IF+ GNSA E +WK + LG G +H I+G+P+K +T++ V+ YL
Sbjct: 197 RNGLLMPLLGVIFLKGNSATEEEIWKFMNVLGAYDGEEHLIYGEPRKFITQDLVQEKYLK 256
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDAEVEA 207
Y+ VP S P Y+F WGPRA+ E++K+KV+ F+A++ +D+P +Y+ D+ E
Sbjct: 257 YEQVPNSDPPRYQFLWGPRAYAETTKMKVLEFLAKMNGATPRDFPSHYEEALRDEEERAQ 316
Query: 208 ILNS 211
+ +S
Sbjct: 317 VRSS 320
Score = 32.7 bits (73), Expect = 0.25
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 1 MPRGRKS--RRRRNARAAEENRNNRKIQ---ASEASETPMAASVVASTPEDDLSGPEEDP 55
MPRG+KS R R R A E K+ A+E E P ++ V+ TP S P
Sbjct: 1 MPRGQKSKLRAREKRRKAREETQGLKVAHATAAEKEECPSSSPVLGDTPTS--SPAAGIP 58
Query: 56 STPEEASTTPEEASSTA 72
P+ A T A++ +
Sbjct: 59 QKPQGAPPTTTAAAAVS 75
>gi|29171709 melanoma antigen family B, 1 [Homo sapiens]
Length = 347
Score = 114 bits (285), Expect = 6e-26
Identities = 49/124 (39%), Positives = 80/124 (64%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
+ LLM +L +IF+ GNSA E +WK + LG G +H I+G+P+K +T++ V+ YL
Sbjct: 197 RNGLLMPLLGVIFLKGNSATEEEIWKFMNVLGAYDGEEHLIYGEPRKFITQDLVQEKYLK 256
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDAEVEA 207
Y+ VP S P Y+F WGPRA+ E++K+KV+ F+A++ +D+P +Y+ D+ E
Sbjct: 257 YEQVPNSDPPRYQFLWGPRAYAETTKMKVLEFLAKMNGATPRDFPSHYEEALRDEEERAQ 316
Query: 208 ILNS 211
+ +S
Sbjct: 317 VRSS 320
Score = 32.7 bits (73), Expect = 0.25
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 1 MPRGRKS--RRRRNARAAEENRNNRKIQ---ASEASETPMAASVVASTPEDDLSGPEEDP 55
MPRG+KS R R R A E K+ A+E E P ++ V+ TP S P
Sbjct: 1 MPRGQKSKLRAREKRRKAREETQGLKVAHATAAEKEECPSSSPVLGDTPTS--SPAAGIP 58
Query: 56 STPEEASTTPEEASSTA 72
P+ A T A++ +
Sbjct: 59 QKPQGAPPTTTAAAAVS 75
>gi|29171707 melanoma antigen family B, 1 [Homo sapiens]
Length = 347
Score = 114 bits (285), Expect = 6e-26
Identities = 49/124 (39%), Positives = 80/124 (64%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
+ LLM +L +IF+ GNSA E +WK + LG G +H I+G+P+K +T++ V+ YL
Sbjct: 197 RNGLLMPLLGVIFLKGNSATEEEIWKFMNVLGAYDGEEHLIYGEPRKFITQDLVQEKYLK 256
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDAEVEA 207
Y+ VP S P Y+F WGPRA+ E++K+KV+ F+A++ +D+P +Y+ D+ E
Sbjct: 257 YEQVPNSDPPRYQFLWGPRAYAETTKMKVLEFLAKMNGATPRDFPSHYEEALRDEEERAQ 316
Query: 208 ILNS 211
+ +S
Sbjct: 317 VRSS 320
Score = 32.7 bits (73), Expect = 0.25
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 1 MPRGRKS--RRRRNARAAEENRNNRKIQ---ASEASETPMAASVVASTPEDDLSGPEEDP 55
MPRG+KS R R R A E K+ A+E E P ++ V+ TP S P
Sbjct: 1 MPRGQKSKLRAREKRRKAREETQGLKVAHATAAEKEECPSSSPVLGDTPTS--SPAAGIP 58
Query: 56 STPEEASTTPEEASSTA 72
P+ A T A++ +
Sbjct: 59 QKPQGAPPTTTAAAAVS 75
>gi|29171714 melanoma antigen family B, 3 [Homo sapiens]
Length = 346
Score = 114 bits (284), Expect = 8e-26
Identities = 52/129 (40%), Positives = 83/129 (64%), Gaps = 3/129 (2%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
K LL+++L +IF+ GN A E +W+ L K+ + G++H IFG+P+K++T++ V+ YL
Sbjct: 200 KTGLLLNLLGVIFMKGNCATEEKIWEFLNKMRIYDGKKHFIFGEPRKLITQDLVKLKYLE 259
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYD---WDSDDDAE 204
Y+ VP S+P YEF WGPRAH E+SK+KV+ F A+V + Y+ D ++ +
Sbjct: 260 YRQVPNSNPARYEFLWGPRAHAETSKMKVLEFWAKVNKTVPSAFQFWYEEALRDEEERVQ 319
Query: 205 VEAILNSGA 213
A+LN G+
Sbjct: 320 AAAMLNDGS 328
>gi|27734781 melanoma antigen family B, 18 [Homo sapiens]
Length = 343
Score = 114 bits (284), Expect = 8e-26
Identities = 53/131 (40%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Query: 88 KKSLLMSILALIFIMGNSAKEALVWKVLGKLGMQPGRQHSIFGDPKKIVTEEFVRRGYLI 147
K LLM L +IF+ GN A E VW+++ +G+ R+H ++GDP+K++T++ V+ YL
Sbjct: 196 KTGLLMIALGVIFLNGNRAPEEAVWEIMNMMGVYADRKHFLYGDPRKVMTKDLVQLKYLE 255
Query: 148 YKPVPRSSPVEYEFFWGPRAHVESSKLKVMHFVARVRNRCSKDWPCNYDWDSDDDAEVEA 207
Y+ VP S P YEF WGPRAH E+SK+KV+ FVA++ + +P Y+ ++ D E
Sbjct: 256 YQQVPNSDPPRYEFLWGPRAHAETSKMKVLEFVAKIHDTVPSAFPSCYE-EALRDEEQRT 314
Query: 208 ILNSGARGYSA 218
+ AR ++A
Sbjct: 315 QARAAARAHTA 325
Score = 32.7 bits (73), Expect = 0.25
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 18/117 (15%)
Query: 1 MPRGRKSRRRRNARAAEENRNNRKIQASEAS----ETPMAASVVASTPEDDLSGPEEDPS 56
MPRG+KS+ R + + N+ + A++A+ E+P +A ++ +L E PS
Sbjct: 1 MPRGQKSKLRAREKRHQARCENQDLGATQATVAEGESPSSAYLLFGDRPQNLPA-AETPS 59
Query: 57 TPEEASTTPEEASSTAQAQKPSVPRSNFQGTKKSLLMSILALIFIMGNSAKEALVWK 113
PE P ++ A S ++ Q +KSL S++EA WK
Sbjct: 60 IPEALQGAPSTTNAIAPVSCSSNEGASSQ-DEKSL------------GSSREAEGWK 103
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,761,910
Number of Sequences: 37866
Number of extensions: 389150
Number of successful extensions: 3265
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 2637
Number of HSP's gapped (non-prelim): 706
length of query: 219
length of database: 18,247,518
effective HSP length: 98
effective length of query: 121
effective length of database: 14,536,650
effective search space: 1758934650
effective search space used: 1758934650
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.