Guide to the Human Genome
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Name: MAGEB3 Sequence: fasta or formatted (346aa) NCBI GI: 29171714
Description:

melanoma antigen family B, 3

Referenced in:

Melanoma Antigen Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         24           3
 C cysteine            0.9          3           1
 D aspartate           3.5         12           1
 E glutamate           5.2         18           3
 F phenylalanine       4.3         15           1
 G glycine             5.5         19           1
 H histidine           1.7          6           1
 I isoleucine          3.8         13           1
 K lysine             13.0         45           3
 L leucine             8.1         28           3
 M methionine          4.3         15           1
 N asparagine          4.0         14           2
 P proline             3.8         13           1
 Q glutamine           5.2         18           2
 R arginine            5.2         18           1
 S serine              9.2         32           4
 T threonine           5.8         20           3
 V valine              5.8         20           2
 W tryptophan          1.2          4           1
 Y tyrosine            2.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma antigen family B, 3 
MAGEB4                0.478   melanoma antigen family B, 4 
MAGEB1                0.449   melanoma antigen family B, 1 
MAGEB1                0.449   melanoma antigen family B, 1 
MAGEB1                0.449   melanoma antigen family B, 1 
MAGEB18               0.427   melanoma antigen family B, 18 
MAGEB10               0.427   melanoma antigen family B, 10 
MAGEB17               0.415   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.415   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.415   PREDICTED: melanoma antigen family B, 17 
MAGEB2                0.410   melanoma antigen family B, 2 
MAGEB5                0.380   PREDICTED: melanoma antigen family B, 5 
MAGEB5                0.380   PREDICTED: melanoma antigen family B, 5 
MAGEB5                0.380   PREDICTED: melanoma antigen family B, 5 
MAGEB16               0.372   melanoma antigen family B, 16 
MAGEA10               0.345   melanoma antigen family A, 10 
MAGEA10               0.345   melanoma antigen family A, 10 
LOC392435             0.339   PREDICTED: similar to hCG1811022 
LOC392435             0.339   PREDICTED: similar to hCG1811022 
LOC392435             0.339   PREDICTED: similar to hCG1811022 
MAGEA11               0.324   melanoma antigen family A, 11 isoform b 
MAGEA11               0.324   melanoma antigen family A, 11 isoform a 
MAGEA4                0.315   melanoma antigen family A, 4 
MAGEA4                0.315   melanoma antigen family A, 4 
MAGEA4                0.315   melanoma antigen family A, 4 
MAGEA4                0.315   melanoma antigen family A, 4 
MAGEB6                0.312   melanoma antigen family B, 6 
MAGEA1                0.307   melanoma antigen family A, 1 
MAGEA8                0.307   melanoma antigen family A, 8 
MAGEA9B               0.287   melanoma antigen family A, 9 -like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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