Guide to the Human Genome
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Name: MAGEB18 Sequence: fasta or formatted (343aa) NCBI GI: 27734781
Description:

melanoma antigen family B, 18

Referenced in:

Melanoma Antigen Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         36           3
 C cysteine            1.2          4           1
 D aspartate           5.0         17           1
 E glutamate           9.0         31           2
 F phenylalanine       3.5         12           2
 G glycine             4.7         16           1
 H histidine           2.9         10           1
 I isoleucine          3.5         12           1
 K lysine              7.6         26           2
 L leucine             8.2         28           2
 M methionine          2.9         10           2
 N asparagine          3.2         11           1
 P proline             5.8         20           2
 Q glutamine           3.8         13           2
 R arginine            6.1         21           1
 S serine              7.9         27           3
 T threonine           5.2         18           2
 V valine              5.0         17           2
 W tryptophan          0.9          3           1
 Y tyrosine            3.2         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma antigen family B, 18 
MAGEB1                0.479   melanoma antigen family B, 1 
MAGEB1                0.479   melanoma antigen family B, 1 
MAGEB1                0.479   melanoma antigen family B, 1 
MAGEB10               0.467   melanoma antigen family B, 10 
MAGEB4                0.464   melanoma antigen family B, 4 
MAGEB17               0.435   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.435   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.435   PREDICTED: melanoma antigen family B, 17 
MAGEB3                0.425   melanoma antigen family B, 3 
MAGEB2                0.422   melanoma antigen family B, 2 
MAGEB16               0.419   melanoma antigen family B, 16 
LOC392435             0.392   PREDICTED: similar to hCG1811022 
LOC392435             0.392   PREDICTED: similar to hCG1811022 
LOC392435             0.392   PREDICTED: similar to hCG1811022 
MAGEA10               0.384   melanoma antigen family A, 10 
MAGEA10               0.384   melanoma antigen family A, 10 
MAGEA11               0.361   melanoma antigen family A, 11 isoform b 
MAGEA11               0.361   melanoma antigen family A, 11 isoform a 
MAGEA8                0.333   melanoma antigen family A, 8 
LOC100292575          0.328   PREDICTED: similar to melanoma antigen family C, 2 ...
MAGEC2                0.328   melanoma antigen family C, 2 
MAGEA4                0.322   melanoma antigen family A, 4 
MAGEA4                0.322   melanoma antigen family A, 4 
MAGEA4                0.322   melanoma antigen family A, 4 
MAGEA4                0.322   melanoma antigen family A, 4 
MAGEA9B               0.316   melanoma antigen family A, 9 -like 
MAGEA9                0.316   melanoma antigen family A, 9 
MAGEA1                0.315   melanoma antigen family A, 1 
MAGEB5                0.306   PREDICTED: melanoma antigen family B, 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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