Guide to the Human Genome
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Name: MAGEB1 Sequence: fasta or formatted (347aa) NCBI GI: 29171707
Description:

melanoma antigen family B, 1

Referenced in:

Melanoma Antigen Family

Other entries for this name:
alt mRNA [347aa] melanoma antigen family B, 1
alt mRNA [347aa] melanoma antigen family B, 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         32           4
 C cysteine            0.9          3           1
 D aspartate           4.6         16           1
 E glutamate           9.2         32           3
 F phenylalanine       3.7         13           1
 G glycine             5.8         20           1
 H histidine           2.0          7           1
 I isoleucine          2.3          8           1
 K lysine              7.2         25           1
 L leucine             8.1         28           2
 M methionine          3.2         11           1
 N asparagine          3.5         12           1
 P proline             6.6         23           2
 Q glutamine           3.2         11           1
 R arginine            7.5         26           3
 S serine              7.5         26           3
 T threonine           6.9         24           3
 V valine              4.6         16           2
 W tryptophan          1.2          4           1
 Y tyrosine            2.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma antigen family B, 1 
MAGEB1                1.000   melanoma antigen family B, 1 
MAGEB1                1.000   melanoma antigen family B, 1 
MAGEB4                0.630   melanoma antigen family B, 4 
MAGEB2                0.575   melanoma antigen family B, 2 
MAGEB18               0.470   melanoma antigen family B, 18 
MAGEB17               0.469   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.469   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.469   PREDICTED: melanoma antigen family B, 17 
MAGEB10               0.448   melanoma antigen family B, 10 
MAGEB3                0.439   melanoma antigen family B, 3 
LOC392435             0.389   PREDICTED: similar to hCG1811022 
LOC392435             0.389   PREDICTED: similar to hCG1811022 
LOC392435             0.389   PREDICTED: similar to hCG1811022 
MAGEA10               0.382   melanoma antigen family A, 10 
MAGEA10               0.382   melanoma antigen family A, 10 
MAGEB16               0.380   melanoma antigen family B, 16 
MAGEB5                0.368   PREDICTED: melanoma antigen family B, 5 
MAGEB5                0.368   PREDICTED: melanoma antigen family B, 5 
MAGEB5                0.368   PREDICTED: melanoma antigen family B, 5 
MAGEB6                0.357   melanoma antigen family B, 6 
MAGEA11               0.342   melanoma antigen family A, 11 isoform b 
MAGEA11               0.342   melanoma antigen family A, 11 isoform a 
MAGEA4                0.342   melanoma antigen family A, 4 
MAGEA4                0.342   melanoma antigen family A, 4 
MAGEA4                0.342   melanoma antigen family A, 4 
MAGEA4                0.342   melanoma antigen family A, 4 
MAGEA8                0.334   melanoma antigen family A, 8 
MAGEA9B               0.317   melanoma antigen family A, 9 -like 
MAGEA9                0.317   melanoma antigen family A, 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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