Guide to the Human Genome
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Name: XRRA1 Sequence: fasta or formatted (792aa) NCBI GI: 150378449
Description:

X-ray radiation resistance associated 1

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         42           1
 C cysteine            1.5         12           1
 D aspartate           4.5         36           2
 E glutamate           7.4         59           2
 F phenylalanine       4.4         35           1
 G glycine             3.8         30           2
 H histidine           3.4         27           2
 I isoleucine          3.9         31           2
 K lysine              8.5         67           3
 L leucine            13.3        105           3
 M methionine          1.5         12           1
 N asparagine          3.3         26           2
 P proline             8.6         68           3
 Q glutamine           3.9         31           2
 R arginine            5.6         44           2
 S serine              7.8         62           2
 T threonine           5.4         43           3
 V valine              5.2         41           2
 W tryptophan          0.5          4           1
 Y tyrosine            2.1         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   X-ray radiation resistance associated 1 
GP1BA                 0.017   platelet glycoprotein Ib alpha polypeptide precurso...
LRRC8E                0.015   leucine rich repeat containing 8 family, member E [H...
LRDD                  0.015   leucine rich repeat and death domain containing prot...
LRDD                  0.015   leucine rich repeat and death domain containing prot...
RSU1                  0.015   ras suppressor protein 1 isoform 1 
TTN                   0.015   titin isoform N2-A 
TLR6                  0.014   toll-like receptor 6 
LGR4                  0.014   leucine-rich repeat-containing G protein-coupled re...
TLR5                  0.013   toll-like receptor 5 
RSU1                  0.013   ras suppressor protein 1 isoform 2 
LRRC28                0.013   leucine rich repeat containing 28 
LGR5                  0.013   leucine-rich repeat-containing G protein-coupled rece...
LRRTM2                0.013   leucine rich repeat transmembrane neuronal 2 
SLITRK6               0.013   slit and trk like 6 
AMIGO2                0.013   adhesion molecule with Ig-like domain 2 
AMIGO2                0.013   adhesion molecule with Ig-like domain 2 
MFHAS1                0.012   malignant fibrous histiocytoma amplified sequence 1...
LRIG2                 0.012   leucine-rich repeats and immunoglobulin-like domains ...
LRRN2                 0.012   leucine rich repeat neuronal 2 
LRRN2                 0.012   leucine rich repeat neuronal 2 
FLRT3                 0.012   fibronectin leucine rich transmembrane protein 3 pre...
FLRT3                 0.012   fibronectin leucine rich transmembrane protein 3 prec...
LRRC8A                0.011   leucine rich repeat containing 8 family, member A [H...
LRRC8A                0.011   leucine rich repeat containing 8 family, member A [...
LRRC8A                0.011   leucine rich repeat containing 8 family, member A [...
LRRC26                0.011   leucine rich repeat containing 26 
SCRIB                 0.011   scribble isoform b 
SCRIB                 0.011   scribble isoform a 
LRRC57                0.011   leucine rich repeat containing 57 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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