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Search of human proteins with 109809739
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109809739 La ribonucleoprotein domain family, member 7 [Homo
sapiens]
(582 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109809739 La ribonucleoprotein domain family, member 7 [Homo ... 1144 0.0
gi|109809741 La ribonucleoprotein domain family, member 7 [Homo ... 1144 0.0
gi|10835067 autoantigen La [Homo sapiens] 84 5e-16
gi|37537710 La ribonucleoprotein domain family, member 6 isoform... 80 5e-15
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 65 2e-10
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 65 2e-10
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 59 2e-08
gi|61102725 la related protein isoform 2 [Homo sapiens] 58 2e-08
gi|39725634 la related protein isoform 1 [Homo sapiens] 58 2e-08
gi|118600973 RNA binding motif protein, X-linked 2 [Homo sapiens] 57 6e-08
gi|40353736 c-Mpl binding protein isoform c [Homo sapiens] 56 1e-07
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 55 2e-07
gi|222352111 MKI67 interacting nucleolar phosphoprotein [Homo sa... 55 2e-07
gi|187960109 RNA binding motif protein 28 [Homo sapiens] 54 3e-07
gi|40353740 c-Mpl binding protein isoform b [Homo sapiens] 54 3e-07
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 54 4e-07
gi|40353738 c-Mpl binding protein isoform a [Homo sapiens] 54 4e-07
gi|238859597 RNA binding motif protein 34 isoform 1 [Homo sapiens] 54 5e-07
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 53 7e-07
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 53 7e-07
gi|40068059 CBF1 interacting corepressor [Homo sapiens] 53 9e-07
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 53 9e-07
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 52 2e-06
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 52 2e-06
gi|104526627 triadin [Homo sapiens] 52 2e-06
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 50 4e-06
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 50 4e-06
gi|221219020 NYD-SP11 protein [Homo sapiens] 50 6e-06
gi|87299628 biorientation of chromosomes in cell division 1-like... 50 6e-06
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 50 7e-06
>gi|109809739 La ribonucleoprotein domain family, member 7 [Homo
sapiens]
Length = 582
Score = 1144 bits (2958), Expect = 0.0
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 1 METESGNQEKVMEEESTEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQ 60
METESGNQEKVMEEESTEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQ
Sbjct: 1 METESGNQEKVMEEESTEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQ 60
Query: 61 IEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPK 120
IEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPK
Sbjct: 61 IEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPK 120
Query: 121 DEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAA 180
DEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAA
Sbjct: 121 DEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAA 180
Query: 181 KAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEEN 240
KAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEEN
Sbjct: 181 KAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEEN 240
Query: 241 MDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSS 300
MDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSS
Sbjct: 241 MDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSS 300
Query: 301 EDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHK 360
EDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHK
Sbjct: 301 EDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHK 360
Query: 361 KKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESEMETDSG 420
KKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESEMETDSG
Sbjct: 361 KKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESEMETDSG 420
Query: 421 VPQNTGMKNEKTANREECRTQEKVNATGPQFVSGVIVKIISTEPLPGRKQVRDTLAAISE 480
VPQNTGMKNEKTANREECRTQEKVNATGPQFVSGVIVKIISTEPLPGRKQVRDTLAAISE
Sbjct: 421 VPQNTGMKNEKTANREECRTQEKVNATGPQFVSGVIVKIISTEPLPGRKQVRDTLAAISE 480
Query: 481 VLYVDLLEGDTECHARFKTPEDAQAVINAYTEINKKHCWKLEILSGDHEQRYWQKILVDR 540
VLYVDLLEGDTECHARFKTPEDAQAVINAYTEINKKHCWKLEILSGDHEQRYWQKILVDR
Sbjct: 481 VLYVDLLEGDTECHARFKTPEDAQAVINAYTEINKKHCWKLEILSGDHEQRYWQKILVDR 540
Query: 541 QAKLNQPREKKRGTEKLITKAEKIRLAKTQQASKHIRFSEYD 582
QAKLNQPREKKRGTEKLITKAEKIRLAKTQQASKHIRFSEYD
Sbjct: 541 QAKLNQPREKKRGTEKLITKAEKIRLAKTQQASKHIRFSEYD 582
>gi|109809741 La ribonucleoprotein domain family, member 7 [Homo
sapiens]
Length = 582
Score = 1144 bits (2958), Expect = 0.0
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 1 METESGNQEKVMEEESTEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQ 60
METESGNQEKVMEEESTEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQ
Sbjct: 1 METESGNQEKVMEEESTEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQ 60
Query: 61 IEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPK 120
IEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPK
Sbjct: 61 IEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPK 120
Query: 121 DEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAA 180
DEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAA
Sbjct: 121 DEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAA 180
Query: 181 KAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEEN 240
KAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEEN
Sbjct: 181 KAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEEN 240
Query: 241 MDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSS 300
MDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSS
Sbjct: 241 MDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSS 300
Query: 301 EDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHK 360
EDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHK
Sbjct: 301 EDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHK 360
Query: 361 KKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESEMETDSG 420
KKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESEMETDSG
Sbjct: 361 KKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESEMETDSG 420
Query: 421 VPQNTGMKNEKTANREECRTQEKVNATGPQFVSGVIVKIISTEPLPGRKQVRDTLAAISE 480
VPQNTGMKNEKTANREECRTQEKVNATGPQFVSGVIVKIISTEPLPGRKQVRDTLAAISE
Sbjct: 421 VPQNTGMKNEKTANREECRTQEKVNATGPQFVSGVIVKIISTEPLPGRKQVRDTLAAISE 480
Query: 481 VLYVDLLEGDTECHARFKTPEDAQAVINAYTEINKKHCWKLEILSGDHEQRYWQKILVDR 540
VLYVDLLEGDTECHARFKTPEDAQAVINAYTEINKKHCWKLEILSGDHEQRYWQKILVDR
Sbjct: 481 VLYVDLLEGDTECHARFKTPEDAQAVINAYTEINKKHCWKLEILSGDHEQRYWQKILVDR 540
Query: 541 QAKLNQPREKKRGTEKLITKAEKIRLAKTQQASKHIRFSEYD 582
QAKLNQPREKKRGTEKLITKAEKIRLAKTQQASKHIRFSEYD
Sbjct: 541 QAKLNQPREKKRGTEKLITKAEKIRLAKTQQASKHIRFSEYD 582
>gi|10835067 autoantigen La [Homo sapiens]
Length = 408
Score = 83.6 bits (205), Expect = 5e-16
Identities = 67/228 (29%), Positives = 117/228 (51%), Gaps = 20/228 (8%)
Query: 24 EKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKL 83
E ++ + A I Q++++FGD NL +D+FL+EQI K +G+V + +++ FN++ +L
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQI-KLDEGWVPLEIMIKFNRLNRL 61
Query: 84 TTDGKLIARALRSS--AVVELDLEGTRIRR--KKPL----GERPKDEDERTVYVELLPKN 135
TTD +I AL S ++E+ + T+IRR KPL E D R+VY++ P +
Sbjct: 62 TTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTD 121
Query: 136 VNHSWIERVFGKCGNVVYISIPH--YKSTGDPKGFAFVEFETKEQAAKAIEFLNNPPEEA 193
I+ G V+ I + +K+ KG FV F++ E A K +E +E
Sbjct: 122 ATLDDIKEWLEDKGQVLNIQMRRTLHKAF---KGSIFVVFDSIESAKKFVETPGQKYKET 178
Query: 194 PR----KPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAK 237
K F K KN+ +V + + K++++ + K E++ + K
Sbjct: 179 DLLILFKDDYFAK--KNEERKQNKVEAKLRAKQEQEAKQKLEEDAEMK 224
Score = 30.0 bits (66), Expect = 6.1
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 480 EVLYVDLLEGDTECHARFKTPED-----AQAVINAYTEI-NKKHCWKLEILSGDHEQRYW 533
E+ ++D + G E FK A+ N ++ NK+ W E+L G+ E+
Sbjct: 258 EIKWIDFVRGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTW--EVLEGEVEKEAL 315
Query: 534 QKILVDRQAKLNQPREKKR 552
+KI+ D+Q LN+ + K R
Sbjct: 316 KKIIEDQQESLNKWKSKGR 334
>gi|37537710 La ribonucleoprotein domain family, member 6 isoform 1
[Homo sapiens]
Length = 491
Score = 80.1 bits (196), Expect = 5e-15
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 42/277 (15%)
Query: 19 KKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFN 78
+++++E++ + ++++ + Q++F+F D NL KD FL + + +++ GYV + LL SF
Sbjct: 77 EREDLEQEWKPPDEELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFK 136
Query: 79 KMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPKD---EDERTVY-VELLPK 134
K+K LT D + A AL+ S V+EL+ + ++RR P+ P + VY + L PK
Sbjct: 137 KVKHLTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLYLSPK 196
Query: 135 -----------NVNHSWIE---RVFGKCGNVVYISI---------------PHYKSTGDP 165
V +E ++FG G + + I Y G
Sbjct: 197 LWALATPQKNGRVQEKVMEHLLKLFGTFGVISSVRILKPGRELPPDIRRISSRYSQVGTQ 256
Query: 166 KGFAFVEFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKK 225
+ A VEFE E A KA EF+ E+ K + + KP P + ++K ++
Sbjct: 257 E-CAIVEFEEVEAAIKAHEFMIT---ESQGKENMKAVLIGMKP-PKKKPAKDKNHDEEPT 311
Query: 226 GRMKKEDNIQAKEENM----DTSNTSISKMKRSRPTS 258
+ ++ + E + D S+ + S S PTS
Sbjct: 312 ASIHLNKSLNKRVEELQYMGDESSANSSSDPESNPTS 348
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 65.1 bits (157), Expect = 2e-10
Identities = 81/381 (21%), Positives = 143/381 (37%), Gaps = 54/381 (14%)
Query: 121 DEDERTVYV-ELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQA 179
DE RTVYV L + + F + G V ++ + ++ P FAFVEF +
Sbjct: 178 DEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSV 235
Query: 180 AKAIEF------------------LNNPPEEAPRKPGIFPKTVKNKPIPALRVV------ 215
+A+ F + PPE P+ + V + A +
Sbjct: 236 PRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEP 295
Query: 216 EEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMK-RSRPTSEGSDIESTEPQKQCSK 274
E K ++K GR + +++ + S S+ K RSR + + + +
Sbjct: 296 ESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPH 355
Query: 275 KKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDI 334
KK+ + R S R RS S D + +KI +K+ +KE + R+
Sbjct: 356 KKRSKSRERRKS--------RSRSHSRDKR----KDTREKIKEKERVKEKDREKEREREK 403
Query: 335 EISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLAL 394
E E+E+ +D K + K K+K +ER + K D KE
Sbjct: 404 EREKEKERGKNKDRDKEREKDREKDKEKDRERER-----------EKEHEKDRDKEKEKE 452
Query: 395 QKASMASLKKTISQIKSESEMETDSGVPQNT--GMKNEKTANREECRTQEKVNATGPQFV 452
Q K +I + + + S P + + ++++RE R + + ++ P+
Sbjct: 453 QDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPR-T 511
Query: 453 SGVIVKIISTEPLPGRKQVRD 473
S I + S P P + +D
Sbjct: 512 SKTIKRKSSRSPSPRSRNKKD 532
Score = 46.2 bits (108), Expect = 8e-05
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 29/153 (18%)
Query: 216 EEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKK 275
E+ K+K+++K R K+ D + K++ T S + +RSR +S ++
Sbjct: 452 EQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSR--------------ER 497
Query: 276 KKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIE 335
+++R R + S +T KRK S S +PRS+ KK +++ KE S E R+ E
Sbjct: 498 RRRRSRSSSRSPRTSKTIKRKSSRSP-----SPRSRNKKDKKRE--KERDHIS-ERRERE 549
Query: 336 ISTEEEKDTGDL-------KDSSLLKTKRKHKK 361
ST K + D K+S+ LK K +K+
Sbjct: 550 RSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKE 582
Score = 37.4 bits (85), Expect = 0.038
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 10/136 (7%)
Query: 215 VEEKKKKKKKKGRMKKEDNI-----QAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQ 269
++EK+KK KK + N + E + S S+ R+ T + S P+
Sbjct: 467 IDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPR 526
Query: 270 ---KQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEA-S 325
K+ K++K+RD + E T RK S+ D + ++ + +K+ KE S
Sbjct: 527 SRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNST-SLKEKEHNKEPDS 585
Query: 326 EASKENRDIEISTEEE 341
SKE D + EE
Sbjct: 586 SVSKEVDDKDAPRTEE 601
Score = 34.7 bits (78), Expect = 0.25
Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 8/224 (3%)
Query: 215 VEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSK 274
++EK++ K+K ++E + ++E N K + + E +K+ K
Sbjct: 384 IKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEK 443
Query: 275 KKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDI 334
+ K E E + K + + R+ + + +S + R
Sbjct: 444 DRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSR 503
Query: 335 EISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLAL 394
S + SS + R KK K+R K + + R +S M
Sbjct: 504 SSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSN---- 559
Query: 395 QKASMASLKKTISQIK-SESEMETDSGVPQNTGMKNEKTANREE 437
+ L+K + +K E E DS V + ++K A R E
Sbjct: 560 DRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEV---DDKDAPRTE 600
Score = 31.2 bits (69), Expect = 2.7
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 202 KTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGS 261
KT+K K + R + + KK K R K+ D+I + E +TS+ K R E
Sbjct: 513 KTIKRK---SSRSPSPRSRNKKDKKREKERDHISERRER--ERSTSMRKSSNDRDGKEKL 567
Query: 262 DIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKI 315
+ ST S K+K+ ++ SS+ S E + APR++ KI
Sbjct: 568 EKNST------SLKEKEHNKEPDSSV-----------SKEVDDKDAPRTEENKI 604
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 65.1 bits (157), Expect = 2e-10
Identities = 81/381 (21%), Positives = 143/381 (37%), Gaps = 54/381 (14%)
Query: 121 DEDERTVYV-ELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQA 179
DE RTVYV L + + F + G V ++ + ++ P FAFVEF +
Sbjct: 62 DEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSV 119
Query: 180 AKAIEF------------------LNNPPEEAPRKPGIFPKTVKNKPIPALRVV------ 215
+A+ F + PPE P+ + V + A +
Sbjct: 120 PRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEP 179
Query: 216 EEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMK-RSRPTSEGSDIESTEPQKQCSK 274
E K ++K GR + +++ + S S+ K RSR + + + +
Sbjct: 180 ESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPH 239
Query: 275 KKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDI 334
KK+ + R S R RS S D + +KI +K+ +KE + R+
Sbjct: 240 KKRSKSRERRKS--------RSRSHSRDKR----KDTREKIKEKERVKEKDREKEREREK 287
Query: 335 EISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLAL 394
E E+E+ +D K + K K+K +ER + K D KE
Sbjct: 288 EREKEKERGKNKDRDKEREKDREKDKEKDRERER-----------EKEHEKDRDKEKEKE 336
Query: 395 QKASMASLKKTISQIKSESEMETDSGVPQNT--GMKNEKTANREECRTQEKVNATGPQFV 452
Q K +I + + + S P + + ++++RE R + + ++ P+
Sbjct: 337 QDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPR-T 395
Query: 453 SGVIVKIISTEPLPGRKQVRD 473
S I + S P P + +D
Sbjct: 396 SKTIKRKSSRSPSPRSRNKKD 416
Score = 46.2 bits (108), Expect = 8e-05
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 29/153 (18%)
Query: 216 EEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKK 275
E+ K+K+++K R K+ D + K++ T S + +RSR +S ++
Sbjct: 336 EQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSR--------------ER 381
Query: 276 KKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIE 335
+++R R + S +T KRK S S +PRS+ KK +++ KE S E R+ E
Sbjct: 382 RRRRSRSSSRSPRTSKTIKRKSSRSP-----SPRSRNKKDKKRE--KERDHIS-ERRERE 433
Query: 336 ISTEEEKDTGDL-------KDSSLLKTKRKHKK 361
ST K + D K+S+ LK K +K+
Sbjct: 434 RSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKE 466
Score = 37.4 bits (85), Expect = 0.038
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 10/136 (7%)
Query: 215 VEEKKKKKKKKGRMKKEDNI-----QAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQ 269
++EK+KK KK + N + E + S S+ R+ T + S P+
Sbjct: 351 IDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPR 410
Query: 270 ---KQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEA-S 325
K+ K++K+RD + E T RK S+ D + ++ + +K+ KE S
Sbjct: 411 SRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNST-SLKEKEHNKEPDS 469
Query: 326 EASKENRDIEISTEEE 341
SKE D + EE
Sbjct: 470 SVSKEVDDKDAPRTEE 485
Score = 34.7 bits (78), Expect = 0.25
Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 8/224 (3%)
Query: 215 VEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSK 274
++EK++ K+K ++E + ++E N K + + E +K+ K
Sbjct: 268 IKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEK 327
Query: 275 KKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDI 334
+ K E E + K + + R+ + + +S + R
Sbjct: 328 DRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSR 387
Query: 335 EISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLAL 394
S + SS + R KK K+R K + + R +S M
Sbjct: 388 SSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSN---- 443
Query: 395 QKASMASLKKTISQIK-SESEMETDSGVPQNTGMKNEKTANREE 437
+ L+K + +K E E DS V + ++K A R E
Sbjct: 444 DRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEV---DDKDAPRTE 484
Score = 31.2 bits (69), Expect = 2.7
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 202 KTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGS 261
KT+K K + R + + KK K R K+ D+I + E +TS+ K R E
Sbjct: 397 KTIKRK---SSRSPSPRSRNKKDKKREKERDHISERRER--ERSTSMRKSSNDRDGKEKL 451
Query: 262 DIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKI 315
+ ST S K+K+ ++ SS+ S E + APR++ KI
Sbjct: 452 EKNST------SLKEKEHNKEPDSSV-----------SKEVDDKDAPRTEENKI 488
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 58.5 bits (140), Expect = 2e-08
Identities = 97/419 (23%), Positives = 164/419 (39%), Gaps = 99/419 (23%)
Query: 218 KKKKKKKKGRMKKEDNIQAKE---------------------ENMDTSNTSISKMKRSRP 256
KKKK+KKK ++D ++ E EN + TS K K+ +
Sbjct: 43 KKKKEKKKQDFDEDDILKELEELSLEAQGIKADRETVAVKPTENNEEEFTSKDKKKKGQK 102
Query: 257 TSEGS--DIESTEPQKQCSKKKK-KRDRVEASS----------LPEVRTGKRKRSSSEDA 303
+ S D +S E + + SK KK + +VE S LP+ GK ++S+ +
Sbjct: 103 GKKQSFDDNDSEELEDKDSKSKKTAKPKVEMYSGSDDDDDFNKLPKKAKGKAQKSNKKWD 162
Query: 304 ESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEK-----------DTGDLKDSSL 352
S KKI ++ I + E+ E+ + S + +K ++G+ D +
Sbjct: 163 GSEEDEDNSKKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGPNIESGNEDDDAS 222
Query: 353 LKTK----RKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQ 408
K K +K +KK +ER K EE LR L + E ++ K+ + QK S ++ +
Sbjct: 223 FKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVK 282
Query: 409 IK----------SESEMETDSGV-PQNTG--MKNEKTANREECRTQEKVNATGPQFVSGV 455
K SE + ET + N G K +K + E +EK GP
Sbjct: 283 SKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPS----- 337
Query: 456 IVKIISTEPLPGRKQVRDTLAAISEVLYVDLLEGDTECHARFKTPEDAQAVINAYTEINK 515
+ T+ A+ E L A+ K E+ Q E
Sbjct: 338 ----------------KATVKAMQEAL------------AKLKEEEERQ---KREEEERI 366
Query: 516 KHCWKLEILSGDHEQRYWQKILVDRQAKLNQPREKKRGTEKLITKAEKIRLAKTQQASK 574
K +LE E+R Q+ ++ K + +E+ + KL+TK+++ A+ + K
Sbjct: 367 KRLEELE-AKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLK 424
Score = 48.5 bits (114), Expect = 2e-05
Identities = 71/327 (21%), Positives = 125/327 (38%), Gaps = 58/327 (17%)
Query: 168 FAFVEFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNK--------------PIPALR 213
F + + K Q K F +N EE K KT K K +P
Sbjct: 91 FTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKTAKPKVEMYSGSDDDDDFNKLPKKA 150
Query: 214 VVEEKKKKKKKKGRMKKEDN---------IQAKEENMDTSNTSISK---MKRSRPTSEGS 261
+ +K KK G + EDN I + E+ D S+ + K+++ G
Sbjct: 151 KGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGP 210
Query: 262 DIES------------TEPQKQCSKK---KKKRDRVEAS-----SLPEVRTGKRKRSSSE 301
+IES T QK+ KK +KKRD +A E+ TGK+ +S +
Sbjct: 211 NIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQK 270
Query: 302 DAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHKK 361
+++ VK + D AS+E + + E++ + GD K+K K
Sbjct: 271 ESQRKFEEETVKSKVTVDT--GVIPASEEKAETPTAAEDDNE-GD---------KKKKDK 318
Query: 362 KHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESEMETDSGV 421
K K+ K +E + SK+ +++ L++ ++ +IK E+E
Sbjct: 319 KKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAKRKE 378
Query: 422 PQNTGMKNEKTANREECRTQEKVNATG 448
+ + + ++E +E++ G
Sbjct: 379 EERLEQEKRERKKQKEKERKERLKKEG 405
Score = 48.5 bits (114), Expect = 2e-05
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 22/199 (11%)
Query: 217 EKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKK 276
+K + K+K+ + K E+ + +DT S+ K PT+ D E + +K KKK
Sbjct: 263 KKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKK--DKKK 320
Query: 277 KKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEI 336
KK ++ E E + G K + E+LA +KE E K + I
Sbjct: 321 KKGEKEEKEK--EKKKGPSKATVKAMQEALAK------------LKEEEERQKREEEERI 366
Query: 337 STEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQK 396
EE + K+ L+ +++ +KK KE+ + ++L+KS+ +E A +
Sbjct: 367 KRLEELE-AKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQ-----REARARAE 420
Query: 397 ASMASLKKTISQIKSESEM 415
A++ L+ ++ S+ +
Sbjct: 421 ATLKLLQAQGVEVPSKDSL 439
Score = 39.7 bits (91), Expect = 0.008
Identities = 45/228 (19%), Positives = 97/228 (42%), Gaps = 27/228 (11%)
Query: 216 EEKKKKKKKKGRMKKEDNIQAK---EENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQC 272
++KK KKKKKG ++++ + K + + +++K+K + + E + ++
Sbjct: 313 KKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEEL 372
Query: 273 SKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENR 332
K+K+ +R+E KR+R ++ E K K++ K + + A +
Sbjct: 373 EAKRKEEERLEQE--------KRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLK 424
Query: 333 DIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSK--SEWMDLKKE 390
++ E L + +K KK IP ++ SK SE M+L
Sbjct: 425 LLQAQGVEVPSKDSLPKKRPIYEDKKRKK------------IPQQLESKEVSESMELCAA 472
Query: 391 YLALQKASMASLKKTISQIKSESEMET-DSGVPQNTGMKNEKTANREE 437
+ + + + ++T ++ E E +T D+G+ M +++ + E
Sbjct: 473 -VEVMEQGVPEKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKVE 519
Score = 37.0 bits (84), Expect = 0.050
Identities = 76/386 (19%), Positives = 142/386 (36%), Gaps = 53/386 (13%)
Query: 10 KVMEEESTEKKKEVEKKKR---SRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRD 66
K M+E + K+E E++KR R+K++ AK+ K+ EQ ++ R
Sbjct: 342 KAMQEALAKLKEEEERQKREEEERIKRLEELEAKR-----------KEEERLEQEKRERK 390
Query: 67 GYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPL-GERPKDEDER 125
+ K KL T + ARA + + L +G + K L +RP ED++
Sbjct: 391 KQKEKERKERLKKEGKLLTKSQREARARAEATLKLLQAQGVEVPSKDSLPKKRPIYEDKK 450
Query: 126 TVYVELLPKNVNHSWIERVFGKCG--NVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAI 183
+ +P+ + + C V+ +P + T P VE E +E A
Sbjct: 451 R---KKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPP-----VEPEEEEDTEDA- 501
Query: 184 EFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDT 243
G+ A+ EE +K + K ++ ++N + +EE +
Sbjct: 502 --------------GL-------DDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEE 540
Query: 244 SNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDA 303
+ E E E ++ S +K ++ E+ + S +
Sbjct: 541 EEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRT 600
Query: 304 ESLAPRSKVKKIIQKDIIKEASEASKEN-RDIEISTEEEKDTGDLKDSSLLKTKRKHKKK 362
+ K K+ I+K ++ + + E R I DTG K L K + H +
Sbjct: 601 KEERAYDKAKRRIEKRRLEHSKNVNTEKLRAPIICVLGHVDTG--KTKILDKLRHTHVQD 658
Query: 363 HKE---RHKMGEEVIPLRVLSKSEWM 385
+ ++G +PL +++ M
Sbjct: 659 GEAGGITQQIGATNVPLEAINEQTKM 684
Score = 32.0 bits (71), Expect = 1.6
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 8 QEKVMEEESTEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIE-KSRD 66
+E+ +E+E E+KK+ EK+++ R+K+ + K A + +E S+D
Sbjct: 378 EEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLKLLQAQGVEVPSKD 437
Query: 67 GYVDISLLVSFNKMKKL--TTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDE 124
+ K KK+ + K ++ ++ A VE+ +G + + P P++E++
Sbjct: 438 SLPKKRPIYEDKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEED 497
Score = 31.2 bits (69), Expect = 2.7
Identities = 68/362 (18%), Positives = 135/362 (37%), Gaps = 23/362 (6%)
Query: 237 KEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKK---KKKRDRVEASSLPEV-RT 292
K ++ D++ I + + EPQK KK KKK+D E L E+
Sbjct: 6 KNKSEDSTKDDIDLDALAAEIEGAGAAKEQEPQKSKGKKKKEKKKQDFDEDDILKELEEL 65
Query: 293 GKRKRSSSEDAESLAPR---SKVKKIIQKDIIKEASEASKENRDIEISTE-EEKDTGDLK 348
+ D E++A + + ++ KD K+ + K++ D S E E+KD+ K
Sbjct: 66 SLEAQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKK 125
Query: 349 DSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQ 408
+ + +K+ ++ S +W +++ +K S + +
Sbjct: 126 TAKPKVEMYSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGE 185
Query: 409 IKSESEMETDSGVPQNTGMKNEKTANREECRTQEKVNATGPQFVSGVIVKIISTEPLPGR 468
ES+ S Q KN+ N E + + F + + + + R
Sbjct: 186 SGDESDEFLQSRKGQKKNQKNKPGPNIESGNEDDDAS-----FKIKTVAQKKAEKKERER 240
Query: 469 KQVRDTLAAISEVLYVDLLEGDTECHARFK------TPEDAQAVINAYTEINKKHCWKLE 522
K+ + A + ++ + LE + ++ K E ++ + T + K E
Sbjct: 241 KKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAE 300
Query: 523 ILSGDHEQRYWQKILVDRQAKLNQ----PREKKRGTEKLITKAEKIRLAKTQQASKHIRF 578
+ + K D++ K + +EKK+G K KA + LAK ++ + +
Sbjct: 301 TPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKR 360
Query: 579 SE 580
E
Sbjct: 361 EE 362
>gi|61102725 la related protein isoform 2 [Homo sapiens]
Length = 1096
Score = 58.2 bits (139), Expect = 2e-08
Identities = 34/84 (40%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Query: 32 KQVLAD-IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLI 90
+++L D I +Q++++F NL +D FLR +++ DG++ I+L+ SF++++ LTTD LI
Sbjct: 400 QELLKDYIKRQIEYYFSVDNLERDFFLRRKMDA--DGFLPITLIASFHRVQALTTDISLI 457
Query: 91 ARALRSSAVVELDLEGTRIRRKKP 114
AL+ S VVE+ E R RR++P
Sbjct: 458 FAALKDSKVVEIVDEKVR-RREEP 480
>gi|39725634 la related protein isoform 1 [Homo sapiens]
Length = 1019
Score = 58.2 bits (139), Expect = 2e-08
Identities = 34/84 (40%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Query: 32 KQVLAD-IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLI 90
+++L D I +Q++++F NL +D FLR +++ DG++ I+L+ SF++++ LTTD LI
Sbjct: 323 QELLKDYIKRQIEYYFSVDNLERDFFLRRKMDA--DGFLPITLIASFHRVQALTTDISLI 380
Query: 91 ARALRSSAVVELDLEGTRIRRKKP 114
AL+ S VVE+ E R RR++P
Sbjct: 381 FAALKDSKVVEIVDEKVR-RREEP 403
>gi|118600973 RNA binding motif protein, X-linked 2 [Homo sapiens]
Length = 322
Score = 56.6 bits (135), Expect = 6e-08
Identities = 60/273 (21%), Positives = 103/273 (37%), Gaps = 28/273 (10%)
Query: 122 EDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAK 181
+D +++ LP + I VF + G +V I++ K TG KGF F+ +E +
Sbjct: 33 KDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTIL 92
Query: 182 AIEFLN-----------------NPPEEAPRKPGIFPKTVK-----NKPIPALRVVEEKK 219
A++ N P+++ + + + P P+L E +
Sbjct: 93 AVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEIDDVTRQLQEKGCGARTPSPSLSESSEDE 152
Query: 220 KKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEG-SDIESTEPQKQCSK---K 275
K KK + KKE + KE+ + S P + + + T P+K SK +
Sbjct: 153 KPTKKHKKDKKEKKKKKKEKEKADREVQAEQPSSSSPRRKTVKEKDDTGPKKHSSKNSER 212
Query: 276 KKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIE 335
+K + E LP+ RT +ED E + K K + +EA E RD
Sbjct: 213 AQKSEPREGQKLPKSRTA--YSGGAEDLERELKKEKPKHEHKSSSRREAREEKTRIRDRG 270
Query: 336 ISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHK 368
S++ + + R + RHK
Sbjct: 271 RSSDAHSSWYNGRSEGRSYRSRSRSRDKSHRHK 303
>gi|40353736 c-Mpl binding protein isoform c [Homo sapiens]
Length = 653
Score = 55.8 bits (133), Expect = 1e-07
Identities = 75/346 (21%), Positives = 131/346 (37%), Gaps = 55/346 (15%)
Query: 38 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSS 97
+ KQ++F F NL KD +L Q++ D ++ I + + ++KKLTTD LI LRSS
Sbjct: 123 LKKQLEFCFSRENLSKDLYLISQMDS--DQFIPIWTVANMEEIKKLTTDPDLILEVLRSS 180
Query: 98 AVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVF--GKCGNVVYIS 155
+V++D +G ++R V + +P+ ++ +F C V+
Sbjct: 181 PMVQVDEKGEKVR---------PSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCE 231
Query: 156 IPHYKSTGDPKGFAFVEFETKEQAAKAIEFL-------NNPPEEAPRKPGIFPKTVKNKP 208
H + ++ F++ A +A ++L P AP G F +
Sbjct: 232 FAHNSNW-------YITFQSDTDAQQAFKYLREEVKTFQGKPIMAPFPNGSFVNGFNSPG 284
Query: 209 IPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSIS------------KMKRSRP 256
+ +K R+K + E+ + S+ +R P
Sbjct: 285 SYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNRYSSRNFPAERHNP 344
Query: 257 TSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSS-------EDAESLAPR 309
T G E T QK+ S + +++ + G+R+R AES AP
Sbjct: 345 TVTGHQ-EQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPT 403
Query: 310 SKVKKI------IQKDIIKEASEASKENR--DIEISTEEEKDTGDL 347
K + + + E ENR D+ +EKD +L
Sbjct: 404 PKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNEEL 449
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 55.1 bits (131), Expect = 2e-07
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 213 RVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQC 272
R E ++++K+K+ R K+ + K+E + K+ R E E E +K+
Sbjct: 59 RKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENK--EGEEKEKRK 116
Query: 273 SKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENR 332
K+KK+R R R +RKR ++ E +K +++ +E E K R
Sbjct: 117 KKEKKERGRTSKEGKERERKEERKREERKERE--------RKKEEREKERERKERKKRER 168
Query: 333 DIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGE 371
EEE+ + K+ + RK +KK +ER + E
Sbjct: 169 KQVGEKEEERKEKERKERKKRERNRKERKKERERKERRE 207
Score = 50.8 bits (120), Expect = 3e-06
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 216 EEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKK 275
E KK+++++K R ++++N + +E+ K +R R + EG + E E +K+ +K
Sbjct: 89 ERKKEERERKKRRREKENKEGEEKE---KRKKKEKKERGRTSKEGKERERKEERKREERK 145
Query: 276 ---KKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQ---KDIIKEASEASK 329
+KK +R + E + +RK+ ++ E K +K + K+ KE +
Sbjct: 146 ERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKER 205
Query: 330 ENRDIEISTEEEKDTGDLKD-SSLLKTKRKHKKKHKERHK 368
R E +EE+ KD + + K + K++ KER K
Sbjct: 206 RERKKERKKKEERKKERQKDRQTNWREKERGKRERKERKK 245
Score = 45.8 bits (107), Expect = 1e-04
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 215 VEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSK 274
+ E++++ + + KKE + K+E + K KR R E +++ K
Sbjct: 38 IREREREIETRKEGKKERESERKKERRERE-----KRKRER---------EKERKRERGK 83
Query: 275 KKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDI 334
K+KK +R + E R K++R E+ E + K KK +K+ + + E + R
Sbjct: 84 KEKKGERKK-----EERERKKRRREKENKEG-EEKEKRKKKEKKERGRTSKEGKERERKE 137
Query: 335 EISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEE 372
E EE K+ K+ + +RK +KK +ER ++GE+
Sbjct: 138 ERKREERKERERKKEEREKERERKERKK-RERKQVGEK 174
Score = 33.1 bits (74), Expect = 0.72
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 241 MDTSNTSISKMKRSRP-TSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSS 299
++T +S S+P T G E E +++ +K+ + E+ E R + KR
Sbjct: 13 LNTELQMVSCSHISKPCTQPGWQSEIREREREIETRKEGKKERESERKKE-RREREKRKR 71
Query: 300 SEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKH 359
+ E R K +K ++ KE E K R+ E EEK+ KRK
Sbjct: 72 EREKERKRERGKKEKKGERK--KEERERKKRRREKENKEGEEKE------------KRK- 116
Query: 360 KKKHKERHKMGEE 372
KK+ KER + +E
Sbjct: 117 KKEKKERGRTSKE 129
Score = 32.3 bits (72), Expect = 1.2
Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Query: 176 KEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQ 235
+E+ K E ++ ++ G K K + R EE+K++++KK +KE +
Sbjct: 102 REKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKE---R 158
Query: 236 AKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKR 295
++E + + + R E + + E ++ ++KK+R+R E + R K
Sbjct: 159 ERKERKKRERKQVGEKEEERKEKERKERKKRERNRK--ERKKERERKERRERKKERKKKE 216
Query: 296 KRSSSEDAE 304
+R +
Sbjct: 217 ERKKERQKD 225
Score = 32.3 bits (72), Expect = 1.2
Identities = 20/102 (19%), Positives = 49/102 (48%)
Query: 213 RVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQC 272
R E+KK++++K R +KE + +++ + K ++ R E + E + +++
Sbjct: 144 RKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERK 203
Query: 273 SKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKK 314
++++K++R + + R R+ + E R + KK
Sbjct: 204 ERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERKK 245
>gi|222352111 MKI67 interacting nucleolar phosphoprotein [Homo
sapiens]
Length = 293
Score = 55.1 bits (131), Expect = 2e-07
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 35/206 (16%)
Query: 100 VELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHY 159
VE E ++R++ ++ + VYV LP ++ + I F + G V +
Sbjct: 20 VEFQKEVAQVRKRITQRKKQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRS 79
Query: 160 KSTGDPKGFAFVEFETKEQAAKAIEFLNN-------------PPEEA----------PRK 196
K TG+ KG+AFVEFE+++ A E +NN PPE+ P K
Sbjct: 80 KRTGNSKGYAFVEFESEDVAKIVAETMNNYLFGERLLECHFMPPEKVHKELFKDWNIPFK 139
Query: 197 PGIFPKTV---KNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKR 253
+P +N+ + +EE+ KKK++ R K + K + D + + K +
Sbjct: 140 QPSYPSVKRYNRNRTLTQKLRMEERFKKKERLLRKK----LAKKGIDYDFPSLILQKTES 195
Query: 254 SRPTSEGSDIESTEPQKQCSKKKKKR 279
T+ T + Q +KKKK+
Sbjct: 196 ISKTN-----RQTSTKGQVLRKKKKK 216
>gi|187960109 RNA binding motif protein 28 [Homo sapiens]
Length = 759
Score = 54.3 bits (129), Expect = 3e-07
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 26/295 (8%)
Query: 67 GYVDISLLVSFNK-MKKLTT------DGKLIARALRSSAVVELDLEGTRIRRKKPLGERP 119
GYV S+L + +K++TT + + + LR+ + E + +K+P ++
Sbjct: 48 GYVTFSMLEDVQRALKEITTFEGCKINVTVAKKKLRNKTKEKGKNENSECPKKEPKAKKA 107
Query: 120 KDEDERT-VYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQ 178
K D++ + + L + ++ VF + G V+ ++IP K G +GF FV+F+ +
Sbjct: 108 KVADKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLE 166
Query: 179 AAKAIEFLNNPPEEAPRKPGIFPKTVKN--KPIPALRVVEEKKKKK-------KKKGRMK 229
A KA++ + N E R + K+ K ++ + E+K + KKKGR
Sbjct: 167 AGKALKGM-NMKEIKGRTVAVDWAVAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGR-- 223
Query: 230 KEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIES--TEPQKQCSKKKKKRDRVEASSL 287
+E++++ +E + D + E +IES T+P + + K+ ++S
Sbjct: 224 EEEDMEEEENDDDDDDDDEEDGVFDDEDEEEENIESKVTKPVQIQKRAVKRPAPAKSSDH 283
Query: 288 PEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEK 342
E + + S +D E LA +S Q+D K ++K+ R + E K
Sbjct: 284 SEEDSDLEESDSIDDGEELA-QSDTSTEEQED--KAVQVSNKKKRKLPSDVNEGK 335
Score = 43.9 bits (102), Expect = 4e-04
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 32/217 (14%)
Query: 158 HYKSTGDPKGFAFVEFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEE 217
H G G+AF EF+ E A KA+ +NN PE IF +PI +E+
Sbjct: 532 HGNMKGQSLGYAFAEFQEHEHALKALRLINNNPE-------IFGPL--KRPIVEFS-LED 581
Query: 218 KKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKK 277
++K K K+ R+++ S+ KM RS+P + EP K +K
Sbjct: 582 RRKLKMKELRIQR----------------SLQKM-RSKPATGEPQKGQPEPAKDQQQKAA 624
Query: 278 KRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEIS 337
+ E S +P + K +S ++ A +V+ K K + S I +
Sbjct: 625 QHHTEEQSKVPPEQKRKAGSTSWTGFQTKAEVEQVELPDGKKRRKVLALPSHRGPKIRL- 683
Query: 338 TEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVI 374
+D G +K K K + + +E+ ++ E +
Sbjct: 684 ----RDKGKVKPVHPKKPKPQINQWKQEKQQLSSEQV 716
Score = 42.7 bits (99), Expect = 0.001
Identities = 97/481 (20%), Positives = 186/481 (38%), Gaps = 64/481 (13%)
Query: 126 TVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEF 185
T++V LP + +E +F + G V + K + +GF +V F E +A++
Sbjct: 5 TLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKE 64
Query: 186 LNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSN 245
+ E + K ++NK + + KK+ K + K + K+ + N
Sbjct: 65 ITTF-EGCKINVTVAKKKLRNKTKEKGKNENSECPKKEPKAKKAK---VADKKARLIIRN 120
Query: 246 TSISKMKRSRPT---SEGSDIESTEPQKQCSKKK-----KKRDRVEAS------SLPEVR 291
S + T G+ +E P+K K + + ++ +EA ++ E++
Sbjct: 121 LSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIK 180
Query: 292 TG-------------KRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEIST 338
K +S S E + SK ++ ++K +E +EN D +
Sbjct: 181 GRTVAVDWAVAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDD 240
Query: 339 EEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKAS 398
+EE D +D + K K + + + + P + SE E L+++
Sbjct: 241 DEEDGVFDDEDEEEENIESKVTKPVQIQKRAVKRPAPAKSSDHSE------EDSDLEESD 294
Query: 399 MASLKKTISQIKSESEMETDSGVPQNTGMKNEKTANREECRTQEKVNATGPQFVSGVIVK 458
+ ++Q + +E + D V + K + ++ E +T V ++
Sbjct: 295 SIDDGEELAQSDTSTEEQEDKAVQVSNKKKRKLPSDVNEGKT--------------VFIR 340
Query: 459 IISTEPLPGRKQVRDTLAAISEVLYVDL-LEGDTE-----CHARFKTPEDAQAVINAYTE 512
+S + +++ + L E+ YV + L DTE A+F T E AQ + A +
Sbjct: 341 NLSFD--SEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASP 398
Query: 513 INKKHCWKLEILSGDHEQRYWQKILVDRQAKLNQPREKK-RGTEKLITKAEKIRLAKTQQ 571
N+ KL+ + + + D AKL + KK GT L E + A T+
Sbjct: 399 ENEAGGLKLD----GRQLKVDLAVTRDEAAKLQTTKVKKPTGTRNLYLAREGLIRAGTKA 454
Query: 572 A 572
A
Sbjct: 455 A 455
>gi|40353740 c-Mpl binding protein isoform b [Homo sapiens]
Length = 730
Score = 54.3 bits (129), Expect = 3e-07
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 38 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSS 97
+ KQ++F F NL KD +L Q++ D ++ I + + ++KKLTTD LI LRSS
Sbjct: 129 LKKQLEFCFSRENLSKDLYLISQMDS--DQFIPIWTVANMEEIKKLTTDPDLILEVLRSS 186
Query: 98 AVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVF--GKCGNVVYIS 155
+V++D +G ++R V + +P+ ++ +F C V+
Sbjct: 187 PMVQVDEKGEKVR---------PSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCE 237
Query: 156 IPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPA 211
H + ++ F++ A +A ++L EE KT + KPI A
Sbjct: 238 FAHNSNW-------YITFQSDTDAQQAFKYLR---EEV--------KTFQGKPIMA 275
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 53.9 bits (128), Expect = 4e-07
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 24/221 (10%)
Query: 171 VEFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTV--KNKPIPALRVVEEK-----KKKKK 223
VE K ++ + + + P + KP + K V K +P P V EK K K
Sbjct: 574 VEKPPKVESKEKVMVKKDKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAA 633
Query: 224 KKGRMKKEDNIQA--KEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDR 281
K+ +KKE ++ K+E + ++K + P + + E +K+ K+ KK ++
Sbjct: 634 KEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEK 693
Query: 282 VEASS-----------LPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKE 330
E EV+ ++K E+ E P+ ++KK + KD K ++ S+
Sbjct: 694 KEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKE---PKKEIKK-LPKDAKKSSTPLSEA 749
Query: 331 NRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGE 371
+ + + K +K S+ K K K K K K G+
Sbjct: 750 KKPAALKPKVPKKEESVKKDSVAAGKPKEKGKIKVIKKEGK 790
Score = 50.1 bits (118), Expect = 6e-06
Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 27/242 (11%)
Query: 214 VVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCS 273
V + K + K+K +KK+ I+ + + T SK + S +E ++ ++T+ + + +
Sbjct: 574 VEKPPKVESKEKVMVKKDKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAA 633
Query: 274 KKK--------KKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEAS 325
K+K K D+ E P+ K++ + E + +VKK ++K+I KE
Sbjct: 634 KEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKE-- 691
Query: 326 EASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWM 385
E + ++++ T ++ ++K + K++ K+ KE K+ +
Sbjct: 692 EKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPK-------------- 737
Query: 386 DLKKEYLALQKASM-ASLKKTISQIKSESEMETDSGVPQNTGMKNEKTANREECRTQEKV 444
D KK L +A A+LK + K E ++ DS K + ++E + E V
Sbjct: 738 DAKKSSTPLSEAKKPAALKPKVP--KKEESVKKDSVAAGKPKEKGKIKVIKKEGKAAEAV 795
Query: 445 NA 446
A
Sbjct: 796 AA 797
Score = 41.6 bits (96), Expect = 0.002
Identities = 44/197 (22%), Positives = 76/197 (38%), Gaps = 4/197 (2%)
Query: 251 MKRSRPTSEGSDIESTEPQKQC--SKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAP 308
+K+++ ES +P + SK +K + E + +V ++ + +
Sbjct: 530 VKQTKLKQRADSRESLKPAAKPLPSKSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVK 589
Query: 309 RSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLL-KTKRKHKKKHKERH 367
+ K K K + E SKE + EK D+K + KT +K K E
Sbjct: 590 KDKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDK 649
Query: 368 KMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTI-SQIKSESEMETDSGVPQNTG 426
K +E V K + +KKE ++ +KK I + K E + E P
Sbjct: 650 KEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEV 709
Query: 427 MKNEKTANREECRTQEK 443
K K ++E + +EK
Sbjct: 710 KKEVKKEEKKEVKKEEK 726
Score = 37.7 bits (86), Expect = 0.029
Identities = 105/517 (20%), Positives = 193/517 (37%), Gaps = 88/517 (17%)
Query: 2 ETESGNQEKVMEEESTEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKD---RFLR 58
E E +E +E+ T KKE EK K+ VK+ + K+ + + K+ + ++
Sbjct: 652 EKEKPKKEVAKKEDKTPIKKE-EKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVK 710
Query: 59 EQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGER 118
++++K V ++KKL D K + L + KKP +
Sbjct: 711 KEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEA--------------KKPAALK 756
Query: 119 PK-DEDERTVYVELL----PKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFV-- 171
PK + E +V + + PK + + GK V ++ +T A +
Sbjct: 757 PKVPKKEESVKKDSVAAGKPKEKGKIKVIKKEGKAAEAVAAAVGTGATTAAVMAAAGIAA 816
Query: 172 -----EFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKG 226
E E + + E L EE + K +K P L ++E+++K K+ +
Sbjct: 817 IGPAKELEAERSLMSSPEDLTKDFEELKAEEVDVTKDIK----PQLELIEDEEKLKETEP 872
Query: 227 -----RMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEG---------SDIESTEPQ--- 269
K+ + + E+ D T+ T E DIE E +
Sbjct: 873 VEAYVIQKEREVTKGPAESPDEGITTTEGEGECEQTPEELEPVEKQGVDDIEKFEDEGAG 932
Query: 270 -KQCSKKKKKRDRVEASSLPE--------VRTGKRKRSSSEDAESLAPRSKVKKIIQKDI 320
++ S+ ++ E E V K S +ED ES + +++
Sbjct: 933 FEESSETGDYEEKAETEEAEEPEEDGEEHVCVSASKHSPTEDEESAKAEADAYIREKRES 992
Query: 321 IKEASEASKENRDIEI------STEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVI 374
+ + ++E+ D I +EEE D D + + +++ E KM E
Sbjct: 993 VASGDDRAEEDMDEAIEKGEAEQSEEEADEEDKAEDA--------REEEYEPEKMEAEDY 1044
Query: 375 PLRVLSK-SEWMDLKKEYLALQKASMASLKKTISQIKSESE-METDSGVPQNT---GMKN 429
+ V+ K +E +++Y L Q+ ++S E S + T G ++
Sbjct: 1045 VMAVVDKAAEAGGAEEQY--------GFLTTPTKQLGAQSPGREPASSIHDETLPGGSES 1096
Query: 430 EKTANREECRTQEKVNATGPQFVSGVIVKIISTEPLP 466
E TA+ EE R + T + ++ IS+EP P
Sbjct: 1097 EATASDEENREDQPEEFTATSGYTQSTIE-ISSEPTP 1132
>gi|40353738 c-Mpl binding protein isoform a [Homo sapiens]
Length = 724
Score = 53.9 bits (128), Expect = 4e-07
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 38 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSS 97
+ KQ++F F NL KD +L Q++ D ++ I + + ++KKLTTD LI LRSS
Sbjct: 123 LKKQLEFCFSRENLSKDLYLISQMDS--DQFIPIWTVANMEEIKKLTTDPDLILEVLRSS 180
Query: 98 AVVELDLEGTRIR 110
+V++D +G ++R
Sbjct: 181 PMVQVDEKGEKVR 193
>gi|238859597 RNA binding motif protein 34 isoform 1 [Homo sapiens]
Length = 430
Score = 53.5 bits (127), Expect = 5e-07
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 22/178 (12%)
Query: 105 EGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGD 164
+G RIR L D+R+V+V LP V S IE+ F CG+++ + I K TG
Sbjct: 269 DGFRIR--VDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGI 326
Query: 165 PKGFAFVEFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVV-EEKKKKKK 223
KGF +V FE + A++ LNN + + + +R V +EK K++
Sbjct: 327 GKGFGYVLFENTDSVHLALK-LNN-------------SELMGRKLRVMRSVNKEKFKQQN 372
Query: 224 KKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEP--QKQCSKKKKKR 279
R+K N+ ++ ++ ++ + +S E + + T+ QK+ + KK+R
Sbjct: 373 SNPRLK---NVSKPKQGLNFTSKTAEGHPKSLFIGEKAVLLKTKKKGQKKSGRPKKQR 427
>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
Length = 237
Score = 53.1 bits (126), Expect = 7e-07
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 26/188 (13%)
Query: 205 KNKPIPALRVVEEKKKKKKKKGRMKKEDNI------------QAKEENMDTSNTSISKMK 252
K K AL EEK + KK K + + + K+E + S S
Sbjct: 41 KKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSS 100
Query: 253 RSRPTSEGSDIESTEPQKQCSKKKKKRDR-----------VEASSLPEVRTGKRKRSSSE 301
S +S SD E E +KQ ++KKK++R E+ S ++ K+ + +E
Sbjct: 101 SSDSSSSSSDSED-EDKKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTE 159
Query: 302 DAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHK- 360
+ + SK +K+ +D +SE+ E+ IE ++K + + ++ + KTK+K K
Sbjct: 160 KEKDIKGLSKKRKMYSEDK-PLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKH 218
Query: 361 KKHKERHK 368
KKH ++ K
Sbjct: 219 KKHSKKKK 226
Score = 48.9 bits (115), Expect = 1e-05
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 20/216 (9%)
Query: 206 NKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIES 265
N+P P V+E+ +KKKK + E EE M+ N K GS ES
Sbjct: 25 NRPRPTWEEVKEQLEKKKKGSKALAEF-----EEKMN-ENWKKELEKHREKLLSGS--ES 76
Query: 266 TEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEAS 325
+ ++Q KK+KK+ +SS S SED + + + KK K S
Sbjct: 77 SSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKK-------KNRS 129
Query: 326 EASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPL--RVLSKSE 383
S E+ E ++ + K S K K K ++ KM E PL LS+SE
Sbjct: 130 HKSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESE 189
Query: 384 WMDLKKEYLALQKASMASLKKTISQIKSESEMETDS 419
+++ E A +K S +K + K + + + S
Sbjct: 190 YIE---EVRAKKKKSSEEREKATEKTKKKKKHKKHS 222
Score = 30.8 bits (68), Expect = 3.6
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 24/118 (20%)
Query: 216 EEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSR-------------------- 255
++ K++KKKK R K E D S S+ K K+S+
Sbjct: 117 KQGKRRKKKKNRSHKSSESSMSETESD-SKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYS 175
Query: 256 ---PTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRS 310
P S S ES ++ +KKKK + E ++ + K K+ S + + A S
Sbjct: 176 EDKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKHKKHSKKKKKKAASSS 233
Score = 30.8 bits (68), Expect = 3.6
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 218 KKKKKKKKGRMKKED------NIQAKEENMDTSNTSISKMK-------RSRPTSEGSD-- 262
KKKKK K G K++D + E+ S+ S+S+ + + + +SE +
Sbjct: 149 KKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKA 208
Query: 263 IESTEPQKQCSKKKKKRDRVEASSLPE 289
E T+ +K+ K KK+ + ASS P+
Sbjct: 209 TEKTKKKKKHKKHSKKKKKKAASSSPD 235
>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
Length = 247
Score = 53.1 bits (126), Expect = 7e-07
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 26/188 (13%)
Query: 205 KNKPIPALRVVEEKKKKKKKKGRMKKEDNI------------QAKEENMDTSNTSISKMK 252
K K AL EEK + KK K + + + K+E + S S
Sbjct: 51 KKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSS 110
Query: 253 RSRPTSEGSDIESTEPQKQCSKKKKKRDR-----------VEASSLPEVRTGKRKRSSSE 301
S +S SD E E +KQ ++KKK++R E+ S ++ K+ + +E
Sbjct: 111 SSDSSSSSSDSED-EDKKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTE 169
Query: 302 DAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHK- 360
+ + SK +K+ +D +SE+ E+ IE ++K + + ++ + KTK+K K
Sbjct: 170 KEKDIKGLSKKRKMYSEDK-PLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKH 228
Query: 361 KKHKERHK 368
KKH ++ K
Sbjct: 229 KKHSKKKK 236
Score = 48.9 bits (115), Expect = 1e-05
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 20/216 (9%)
Query: 206 NKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIES 265
N+P P V+E+ +KKKK + E EE M+ N K GS ES
Sbjct: 35 NRPRPTWEEVKEQLEKKKKGSKALAEF-----EEKMN-ENWKKELEKHREKLLSGS--ES 86
Query: 266 TEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEAS 325
+ ++Q KK+KK+ +SS S SED + + + KK K S
Sbjct: 87 SSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKK-------KNRS 139
Query: 326 EASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPL--RVLSKSE 383
S E+ E ++ + K S K K K ++ KM E PL LS+SE
Sbjct: 140 HKSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESE 199
Query: 384 WMDLKKEYLALQKASMASLKKTISQIKSESEMETDS 419
+++ E A +K S +K + K + + + S
Sbjct: 200 YIE---EVRAKKKKSSEEREKATEKTKKKKKHKKHS 232
Score = 30.8 bits (68), Expect = 3.6
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 24/118 (20%)
Query: 216 EEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSR-------------------- 255
++ K++KKKK R K E D S S+ K K+S+
Sbjct: 127 KQGKRRKKKKNRSHKSSESSMSETESD-SKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYS 185
Query: 256 ---PTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRS 310
P S S ES ++ +KKKK + E ++ + K K+ S + + A S
Sbjct: 186 EDKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKHKKHSKKKKKKAASSS 243
Score = 30.8 bits (68), Expect = 3.6
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 218 KKKKKKKKGRMKKED------NIQAKEENMDTSNTSISKMK-------RSRPTSEGSD-- 262
KKKKK K G K++D + E+ S+ S+S+ + + + +SE +
Sbjct: 159 KKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKA 218
Query: 263 IESTEPQKQCSKKKKKRDRVEASSLPE 289
E T+ +K+ K KK+ + ASS P+
Sbjct: 219 TEKTKKKKKHKKHSKKKKKKAASSSPD 245
>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
Length = 450
Score = 52.8 bits (125), Expect = 9e-07
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 184 EFLNNPPEEAPRKPGIFPKTVKNKP--IPALRVVEEKKKKK-KKKGRMKKEDNIQAKEEN 240
E++ + EE P + T K K + L +E+KKKKK +KK + +K + K ++
Sbjct: 198 EYVASEGEEDPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKDRKKKKFQKSRSKHKKHKS 257
Query: 241 MDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEA---SSLPEVRTGKRKR 297
+S++S S + + S+ ES +K+ +KK+K+++ S E K+++
Sbjct: 258 SSSSSSSSSSSSSTETSESSSESESNNKEKKIQRKKRKKNKCSGHNNSDSEEKDKSKKRK 317
Query: 298 SSSEDAESLAPRSKVK---KIIQKDIIKEASEASKENRDIEISTEE---EKDTGDLKDSS 351
E + S R K K + ++ + +E S+ S + D + T + EK + K+ S
Sbjct: 318 LHEELSSSHHNREKAKEKPRFLKHESSREDSKWSHSDSDKKSRTHKHSPEKRGSERKEGS 377
Query: 352 LLKTKRKHKKKHKER 366
R H ++ + R
Sbjct: 378 ----SRSHGREERSR 388
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 52.8 bits (125), Expect = 9e-07
Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 24/287 (8%)
Query: 170 FVEFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMK 229
+ + +TK+ A K+ + + ++A + K VK ++KKK KK
Sbjct: 283 YTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKK---------DDKKKDVKKDTEST 333
Query: 230 KEDNIQAKEENMDTSNTS--ISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSL 287
++ +K+E DT + K + + T + + TE + R+ +AS
Sbjct: 334 DAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKN 393
Query: 288 PEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDL 347
+ + +K + S D+ES K QKD K+ ++ +N+ + +EE D
Sbjct: 394 DDKKKDAKKITFSTDSES----ELESKESQKDEKKDKKDSKTDNKK-SVKNDEESTDADS 448
Query: 348 KDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWM----DLKKE--YLALQKASMAS 401
+ K +K +KK K+ K ++ + ++S M +LKK+ + +K S
Sbjct: 449 EPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSKEKKGSKKD 508
Query: 402 LKKTISQIKSESEMETDSGVPQNTGMKNEKTANREECRTQEKVNATG 448
+KK + ++ E D TG K + ++E + G
Sbjct: 509 IKKDARKDTESTDAEFDES--SKTGFKTSTKIKGSDTESEESLYKPG 553
Score = 50.8 bits (120), Expect = 3e-06
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 20/234 (8%)
Query: 235 QAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQ--KQCSKKKKKRDRVEASSLPEVRT 292
Q +N T +K + + SD ES + + K+ SKK KK V+
Sbjct: 270 QNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKN----------VKK 319
Query: 293 GKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEK---DTGDLK- 348
+K+ +D ES S K +KD K+ + K+++ + E ++GD K
Sbjct: 320 DDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKD 379
Query: 349 ---DSSLLKTKRKHKKKHKERHKMGEEVIPLRVL-SKSEWMDLKKEYLALQKASMASLKK 404
DS LK K+ K K+ K+ L SK D KK+ + + S+K
Sbjct: 380 ARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKN 439
Query: 405 TISQIKSESEMETDSGVPQNTGMKNEKTANREECRTQEKVNATGPQFVSGVIVK 458
++SE + DS + K +K + +++ + K NA + S + +K
Sbjct: 440 DEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELK 493
Score = 33.1 bits (74), Expect = 0.72
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 10/146 (6%)
Query: 216 EEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKK 275
+EKK KK K KK +++ EE+ D + K+ + + + +K K
Sbjct: 421 DEKKDKKDSKTDNKK--SVKNDEESTDADSEPKGDSKKGKK-------DEKKGKKDSKKD 471
Query: 276 KKKRDRVEASSLPEVRTG-KRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDI 334
KK+D + + E+ + + K+ E + +KK +KD +E + ++
Sbjct: 472 DKKKDAKKNAESTEMESDLELKKDKKHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTG 531
Query: 335 EISTEEEKDTGDLKDSSLLKTKRKHK 360
++ + K + + SL K K K
Sbjct: 532 FKTSTKIKGSDTESEESLYKPGAKKK 557
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 52.0 bits (123), Expect = 2e-06
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 217 EKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKK 276
EK ++K G + K++ S S S S +S SD E E +KQ ++K
Sbjct: 74 EKSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEE-KKQGKRRK 132
Query: 277 KKRDRV-----------EASSLPEVRTGKRKRSSSE---DAESLAPRSKVKKIIQKDIIK 322
KK++R E+ S V+ K+ + +E D SL+ + K K +
Sbjct: 133 KKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSS 192
Query: 323 EASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHK 368
E+S S D++ + + + + K K+K KKH ++ K
Sbjct: 193 ESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQHKKHSKKKK 238
Score = 36.2 bits (82), Expect = 0.085
Identities = 43/212 (20%), Positives = 87/212 (41%), Gaps = 18/212 (8%)
Query: 206 NKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIES 265
N+P P V+++ + KK + E EE M+ + + R + S ES
Sbjct: 35 NRPRPTWEEVKKQLENKKTGSKALAEF-----EEKMNENWKKELEKSREKLLSGN---ES 86
Query: 266 TEPQKQCSKKKKKRD-RVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEA 324
+ +++ KK+KK+ R +SS + S E+ + R K K K
Sbjct: 87 SSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSST 146
Query: 325 SEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEW 384
E+ E+++ ++ KD + K+ + +K KK + + + E S SE
Sbjct: 147 HESESESKESVKKKKKSKDETE-KEKDVRSLSKKRKKSYPDDKPLSSE-------SSSE- 197
Query: 385 MDLKKEYLALQKASMASLKKTISQIKSESEME 416
D +++ A +K ++ ++K + + +
Sbjct: 198 SDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQ 229
Score = 32.3 bits (72), Expect = 1.2
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 216 EEKKKKKKKKGRMKKEDNIQA----------KEENMDTSNTSISKMKRSRPTSEGSDIES 265
E KKKKK K +KE ++++ ++ + + ++S S + + E
Sbjct: 155 ESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEE 214
Query: 266 TEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRS 298
E K+ KKKKK+ + S + ++G +S
Sbjct: 215 REQAKEKVKKKKKKQHKKHSKKKKKKSGSSHKS 247
Score = 30.0 bits (66), Expect = 6.1
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 191 EEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISK 250
E+ +K G K KN+ + + + + + K+ KK+ + E+ D + S K
Sbjct: 121 EDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDVRSLS-KK 179
Query: 251 MKRSRPTSEGSDIEST-EPQKQCSKKKKKRDRVEASSLPEVRTGKRKR 297
K+S P + ES+ E + + KK+ R E + + K+K+
Sbjct: 180 RKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKK 227
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 51.6 bits (122), Expect = 2e-06
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 15/193 (7%)
Query: 172 EFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKE 231
E KE+ ++ P E ++P PK + + PA EEKK KK++ K+
Sbjct: 813 EIPKKEEVKSPVKEEEKPQEVKVKEP---PKKAEEEKAPATPKTEEKKDSKKEEAPKKEA 869
Query: 232 DNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVR 291
+ +E+ ++ K K S+ ++ + E KKK EA + EV+
Sbjct: 870 PKPKVEEKK----EPAVEKPKESKVEAKKEEAED--------KKKVPTPEKEAPAKVEVK 917
Query: 292 TGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSS 351
+ + +E A+ +K K+ + KEA+ K+ ++ + EEK + K
Sbjct: 918 EDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKE 977
Query: 352 LLKTKRKHKKKHK 364
KT K K K
Sbjct: 978 DDKTLSKEPSKPK 990
Score = 48.9 bits (115), Expect = 1e-05
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
Query: 172 EFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKE 231
E E K E ++ EEAP+K PK + K + E K + KK++ KK+
Sbjct: 843 EEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKK 902
Query: 232 DNIQAKEE--NMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKK----KKKRDRVEAS 285
KE ++ + K K E D ++ EP K KK +KK + E +
Sbjct: 903 VPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKA 962
Query: 286 SLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTG 345
PE + K + + ED ++L+ K + + K +S K+++ E +TE++ G
Sbjct: 963 KKPEEKP-KTEAKAKEDDKTLSKEPSKPKAEKAE--KSSSTDQKDSKPPEKATEDKAAKG 1019
Score = 38.9 bits (89), Expect = 0.013
Identities = 53/266 (19%), Positives = 97/266 (36%), Gaps = 16/266 (6%)
Query: 165 PKGFAFVEFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKK 224
P+ ++ ++ E A E +P ++ P K K P A ++E K +K
Sbjct: 753 PEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEK 812
Query: 225 KGRMKKEDNIQAKEENMDTSNTSISKMKRSR----PTSEGSDIESTEPQKQCSKKKKKRD 280
+ K+E KEE K++ P + ++ + +++ KK+ +
Sbjct: 813 EIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKP 872
Query: 281 RVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEE 340
+VE P V K + ++ E+ + + E E +K E++ +E
Sbjct: 873 KVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKE 932
Query: 341 EKDTGDLKDSSLLKTKR---KHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKA 397
D + S + K + K +E+ K EE +K + L KE
Sbjct: 933 PDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKE------- 985
Query: 398 SMASLKKTISQIKSESEMETDSGVPQ 423
S K KS S + DS P+
Sbjct: 986 --PSKPKAEKAEKSSSTDQKDSKPPE 1009
Score = 30.0 bits (66), Expect = 6.1
Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 160 KSTGDPKGFAFVEFETKEQAA--KAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEE 217
K P+ A + E KE A + E P++A K P K EE
Sbjct: 901 KKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEE 960
Query: 218 KKKKKKKKGRMKKEDNIQAKEENMDTS-NTSISKMKRSRPTSEGSDIESTEPQKQCSKKK 276
K KK ++K + + +AKE++ S S K +++ +S +S P+K K
Sbjct: 961 KAKKPEEKPKTE----AKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKA 1016
Query: 277 KK 278
K
Sbjct: 1017 AK 1018
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 51.6 bits (122), Expect = 2e-06
Identities = 66/305 (21%), Positives = 121/305 (39%), Gaps = 57/305 (18%)
Query: 190 PEEAPRKPGIFPKTVKNKPIPALRVVEEK-----KKKKKKKGRMKKEDNIQAKEENMDTS 244
P ++P P P ++P PA +EEK K +KK KK++ K+++ +
Sbjct: 284 PGQSPAIPPPLPTEQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKET 343
Query: 245 NTSISKMK--RSRPTSEGS----------------DIESTEPQKQCSKKKKKRDRVEASS 286
+ K + ++ T +G+ D + T+ + + K K+ +
Sbjct: 344 AIDVEKKEPGKASETKQGTVKIAAQAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKH 403
Query: 287 LPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGD 346
+ ++ K++ S D + A + K+ I IK+A KE + + +E +
Sbjct: 404 VEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKS 463
Query: 347 LKDSSLLKTKRKHK-----------------KKHKERHKMGEEVIPL--RVLSKSEWM-- 385
K SS+LK K K KK ++ K G+EV P ++ K E
Sbjct: 464 GKTSSILKDKEPIKGKEEKVPASLKEKEPETKKDEKMSKAGKEVKPKPPQLQGKKEEKPE 523
Query: 386 -DLKK-------EYLALQKASMASLKKTISQIKSESEMETDSGVPQNTGMKNEKTANREE 437
+KK E + + K + +KT+S K E ++ + Q + EKTA +
Sbjct: 524 PQIKKEAKPAISEKVQIHKQDIVKPEKTVSHGKPEEKV-----LKQVKAVTIEKTAKPKP 578
Query: 438 CRTQE 442
+ E
Sbjct: 579 TKKAE 583
Score = 43.1 bits (100), Expect = 7e-04
Identities = 52/296 (17%), Positives = 117/296 (39%), Gaps = 19/296 (6%)
Query: 191 EEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISK 250
+E P K + ++ K P + + +++KK K + +++ + K + + +K
Sbjct: 177 KEKPEKKATHKEKIEKKEKPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAAK 236
Query: 251 MKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRT-GKRKRSSSEDAESLAPR 309
+K + T + + + SK ++K + ++ G K S P
Sbjct: 237 VKEVQKTPSKPKEKEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGDLKPGQSPAIPPPLPT 296
Query: 310 SKVKKIIQKDIIKEASEASKENRDIEISTE-EEKDTGDLKDSSLLKTKRKHKKKH---KE 365
+ + E E K+ + ++++E ++K+ D+K S +T +KK
Sbjct: 297 EQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKKEPGKAS 356
Query: 366 RHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESEMETDSGVPQNT 425
K G I + +K + + K++ +K + K Q K E +E +
Sbjct: 357 ETKQGTVKIAAQAAAKKD--EKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEH 414
Query: 426 GMKNEKTANREECRTQEKVNATGPQFVSGVIVKIISTEPLPGRKQVRDTLAAISEV 481
+ ++K + R +E++ A V +K + +PG+K+ + T E+
Sbjct: 415 SVPSDKQVKAKTERAKEEIGA--------VSIK----KAVPGKKEEKTTKTVEQEI 458
Score = 35.8 bits (81), Expect = 0.11
Identities = 60/269 (22%), Positives = 101/269 (37%), Gaps = 49/269 (18%)
Query: 210 PALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQ 269
P LR E K K +K+ K E IQ K + + ++ +P + + E E +
Sbjct: 136 PPLRKKEIHKDKTEKQE--KPERKIQTKVTHKEKEKGKEKVREKEKPEKKATHKEKIEKK 193
Query: 270 KQCS--------KKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDII 321
++ KK K ++ E + EV+ GK+++ A KVK+ +QK
Sbjct: 194 EKPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAA-------KVKE-VQKTPS 245
Query: 322 KEASEASKENRDIEISTEEEKDT-------------GDLK-------------DSSLLKT 355
K + KE +S E+KD GDLK + + T
Sbjct: 246 KPKEKEDKEK--AAVSKHEQKDQYAFCRYMIDIFVHGDLKPGQSPAIPPPLPTEQASRPT 303
Query: 356 KRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESEM 415
+ KE K E K E D+KK+ +K + ++K SE++
Sbjct: 304 PASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKK---SEKETAIDVEKKEPGKASETKQ 360
Query: 416 ETDSGVPQNTGMKNEKTANREECRTQEKV 444
T Q K+EK + ++ + +V
Sbjct: 361 GTVKIAAQAAAKKDEKKEDSKKTKKPAEV 389
Score = 35.8 bits (81), Expect = 0.11
Identities = 82/386 (21%), Positives = 158/386 (40%), Gaps = 32/386 (8%)
Query: 12 MEEESTEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDI 71
+EE+ EKKK +K K+ DI K+ + + + ++ + +++ G V I
Sbjct: 309 LEEKEGEKKKAEKKVTSETKKKEKEDIKKKSE---KETAIDVEKKEPGKASETKQGTVKI 365
Query: 72 SLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVEL 131
+ + K +K K ++ + A VE + +++K + + E +V +
Sbjct: 366 AAQAAAKKDEK-----KEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDK 420
Query: 132 LPKNVNHSWIERVFGKCGNV-VYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNPP 190
K + ER + G V + ++P K + K VE E +++ + +
Sbjct: 421 QVK----AKTERAKEEIGAVSIKKAVPGKK---EEKTTKTVEQEIRKEKSGKTSSILKDK 473
Query: 191 EEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISK 250
E K P ++K K P + +++K K K K +Q K+E
Sbjct: 474 EPIKGKEEKVPASLKEKE-PETK--KDEKMSKAGKEVKPKPPQLQGKKEEKPEPQIK--- 527
Query: 251 MKRSRPT-SEGSDI---ESTEPQKQCSK-KKKKRDRVEASSLPEVRTGKRKRSSSEDAES 305
K ++P SE I + +P+K S K +++ + ++ +T K K + +
Sbjct: 528 -KEAKPAISEKVQIHKQDIVKPEKTVSHGKPEEKVLKQVKAVTIEKTAKPKPTKKAEHRE 586
Query: 306 LAPRSKVKKIIQKDIIKEASEASKE-NRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHK 364
P S +K K K SE ++ + EIS +E K+ D+K L + K +K+
Sbjct: 587 REPPS-IKTDKPKPTPKGTSEVTESGKKKTEISEKESKEKADMK--HLREEKVSTRKESL 643
Query: 365 ERHKMGEEVIPLRVLSKSEWMDLKKE 390
+ H + + P RV E + K+
Sbjct: 644 QLHNVTKAEKPARVSKDVEDVPASKK 669
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 50.4 bits (119), Expect = 4e-06
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 33/287 (11%)
Query: 185 FLNNPPEEAPRKPGIFPKTVKNKP-IPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDT 243
FL P + + G + VK+ +P++ ++KKKKKK + ED +K D
Sbjct: 562 FLEKPVPDMTQVSGPNAQLVKSDDYLPSIEQQPQQKKKKKKNNHIVAED--PSKGFGKDD 619
Query: 244 SNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDA 303
+ + +R + +GS E KKKKKR + + + + K + E
Sbjct: 620 FPGGVDNQELNRNSLDGSQEE---------KKKKKRSKAK----KDPKEPKEPKEKKEPK 666
Query: 304 ESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKH 363
E P K KI ++ K+A A+ + + + S+ ++ D+ + S+L K K K +
Sbjct: 667 EPKTP--KAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDS---EASALKKKVNKGKTEG 721
Query: 364 KERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESEMETDSGVPQ 423
E + + P + E ++K + Q + +I E + D+
Sbjct: 722 SENSDLDKTPPPSPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAA--- 778
Query: 424 NTGMKNEKTANREECRTQEKVNATGPQFVSGVIVKIISTEPLPGRKQ 470
+ +N + QE V+A GP V+ KI+S+ + +K+
Sbjct: 779 ----GRDSPSNTSQSEQQESVDAEGP-----VVEKIMSSRSVKKQKE 816
Score = 44.3 bits (103), Expect = 3e-04
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 27/235 (11%)
Query: 172 EFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKE 231
E + K++ +KA + P E +K PKT K IP +E K+KK K K +
Sbjct: 639 EEKKKKKRSKAKKDPKEPKEPKEKKEPKEPKTPKAPKIP-----KEPKEKKAKTATPKPK 693
Query: 232 DNIQAKEENMDTSNTSISKMKRSRPT--SEGSDIESTEPQKQCSKKKKKRDRVEASSLPE 289
+ ++ + D+ +++ K T SE SD++ T P ++ + + S +
Sbjct: 694 SSKKSSNKKPDSEASALKKKVNKGKTEGSENSDLDKTPPPSPPPEEDEDPGVQKRRSSRQ 753
Query: 290 VRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKD 349
V KRKR +ED E K +EA +A RD +T + + +
Sbjct: 754 V---KRKR-YTEDLEF------------KISDEEADDADAAGRDSPSNTSQSEQQESVDA 797
Query: 350 SSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKK 404
+ K + K++ + GEEV K + YL Q AS+ L+K
Sbjct: 798 EGPVVEKIMSSRSVKKQKESGEEVEIEEFYVKYK----NFSYLHCQWASIEDLEK 848
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 50.4 bits (119), Expect = 4e-06
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 229 KKEDNIQAKEENMDTSNTSISKM-KRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSL 287
K + +KE T+ T++SK+ KR EG+ +E K+ +K +KK E+S
Sbjct: 312 KIKQRADSKESLKATTKTAVSKLAKREEVVEEGAKEARSELAKELAKTEKKAK--ESSEK 369
Query: 288 PEVRTGKRKRSSSEDAESLAP--RSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTG 345
P + K +R +E +E+L R +K + K +KE +E +D E E +K+
Sbjct: 370 PPEKPAKPERVKTESSEALKAEKRKLIKDKVGKKHLKEKISKLEEKKDKE-KKEIKKERK 428
Query: 346 DLK-DSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEY-LALQKASMASLK 403
+LK D + K+ KK+ K + E L+ +SK + E L KA +
Sbjct: 429 ELKKDEGRKEEKKDAKKEEKRKDTKPE----LKKISKPDLKPFTPEVRKTLYKAKVPGRV 484
Query: 404 K--TISQIKSESEMETDSGVP 422
K I+ E E+ ++ P
Sbjct: 485 KIDRSRAIRGEKELSSEPQTP 505
Score = 32.7 bits (73), Expect = 0.94
Identities = 32/188 (17%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 176 KEQAAKAIEFLNNPPEEAPRKPGIFP--------KTVKNKPIPALRVVEEKKKKKKKKGR 227
+ +A + + L++ P+ P + G P + V + P + EE K++++
Sbjct: 488 RSRAIRGEKELSSEPQTPPAQKGTVPLPTISGHRELVLSSPEDLTQDFEEMKREERALLA 547
Query: 228 MKKEDNIQAKEENMDTSNT------------SISKMKRSRPTSEGSDIESTEPQKQCSKK 275
+++ + K +DT+ S+ + + + ++ P++Q SK
Sbjct: 548 EQRDTGLGDKPFPLDTAEEGPPSTAIQGTPPSVPGLGQEEHVMKEKELVPEVPEEQGSKD 607
Query: 276 KKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIE 335
+ E + K++R + + R + + +++D+I++A +E ++
Sbjct: 608 RGLDSGAETEEEKDTWEEKKQREAERLPDRTEAREESEPEVKEDVIEKAE--LEEMEEVH 665
Query: 336 ISTEEEKD 343
S EEE+D
Sbjct: 666 PSDEEEED 673
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 50.1 bits (118), Expect = 6e-06
Identities = 89/414 (21%), Positives = 177/414 (42%), Gaps = 58/414 (14%)
Query: 7 NQEKVMEEE---STEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEK 63
++ K+ +EE + K+ K++R ++Q DI K+ DF + L KD ++ K
Sbjct: 2086 DERKLTQEEIKMTKMKRALFVKERRLSIEQSKLDI-KEWDFSEKRSELTKDE--KKLARK 2142
Query: 64 SRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGT--------------RI 109
R + ++ NK +K+T + +AR S +++ + EG R
Sbjct: 2143 QRKLANKMRRMI--NKEEKMTEEESKLARK-HSEVILDDEEEGGIEEEEVIPFLKRRWRK 2199
Query: 110 RRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFA 169
R++ G++PK++ V+ E F + + + +S +
Sbjct: 2200 RKEAKRGDKPKEK---------FSSQVDEVESEEHFSEEMESLLDELEKQESLSSEE--- 2247
Query: 170 FVEFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMK 229
E E +E+ + E + EE + K V+ + EE+KKKKKK+ K
Sbjct: 2248 --EEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKE--------EEEKKKKKKE---K 2294
Query: 230 KEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSK-----KKKKRDRVEA 284
K++ +Q KEE + +S+ + + E + ES +++ + KK+K+ +++
Sbjct: 2295 KKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEKQFKLQE 2354
Query: 285 SSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDT 344
+R +R S R+ +++ + K S A + + E++ +
Sbjct: 2355 QRRKSLRGRERVLSILRGVPHGKGRAIRLGVLKSPLKKLMSTALEMKEKTPVPVPEKQIS 2414
Query: 345 GDLKDSSLLKTKRKH-KKKHKERHKMGE-EVIPLRVLS---KSEWMDLKKEYLA 393
+ K +++++ RK KER MG+ E IP VL +S+ DLK +++
Sbjct: 2415 WEDKKATVVEIPRKFLGTMDKEREVMGKYEPIPPHVLGTVLESQAQDLKTPFMS 2468
Score = 43.1 bits (100), Expect = 7e-04
Identities = 77/380 (20%), Positives = 160/380 (42%), Gaps = 44/380 (11%)
Query: 216 EEKKKKKKKKGRMKKEDNIQAKEENM--------DTSNTSISKMKRSRPTSEGSDIESTE 267
E +K +K+K KK + + +EE + + N K++ + D + E
Sbjct: 1654 EAEKLAQKRKKLAKKWEKVAREEEKLAKKGGKLAEVKNILAQKVEELPQREQNLDWQEKE 1713
Query: 268 PQKQCSKKKKKRDRV----EASSLPEVRTGKRKRSSSEDAESLA-PRSKVK----KIIQK 318
++ + + + + E + E + + K+ +E+ E+LA R K+ K+ Q+
Sbjct: 1714 LAQELEELEWDMEELSWKEEELNQEEGKLVEEKKKLAEEEEALAWQREKLSEEETKLAQE 1773
Query: 319 D--IIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPL 376
+ +I+E + ++ E EEE+ G ++ + K + +K+ + + M E
Sbjct: 1774 EELLIQEKEKLAQHK---EKMPEEEERLGRKREQLIEKKMKLAQKRERWINSMEE----- 1825
Query: 377 RVLSKSEWMDLKKEYLALQKASMASLKKTISQIKS----ESEMETDS-----GVPQNTGM 427
L+K++ + +K+ LA +K ++A K+ ++Q K E T S V GM
Sbjct: 1826 --LTKNKMILYQKKNLAQEKKNLAQEKEKLAQRKENLLYNKERLTHSKKQLVQVKNKLGM 1883
Query: 428 KNEKTANREECRTQEKVNA-TGPQFVSGVIVKIISTEPLPGRKQVRDTLAAISEVLYVDL 486
N+ A EE TQEK + ++ K++ E +KQ + + L +
Sbjct: 1884 FNKILAQVEEKLTQEKETVIKKKEKLAETEKKLVQVEDSLAKKQEKLAQEKMKLALEKAM 1943
Query: 487 LEGDTECHARFKTPEDAQAVINAYTEINKKHCWKLEILSGDHEQRYWQKILVDRQAKLNQ 546
++G ++ +A+ E+ + K+ ++ G + RQ K+ Q
Sbjct: 1944 VQGKKRLRGELDIAKEEKAL---NLEMKRLAEEKMRLVEGKETLSKGETPETSRQRKMTQ 2000
Query: 547 PREKKRGTEKLITKAEKIRL 566
++ E+ ++ EKI L
Sbjct: 2001 VEQEL--FERKLSLEEKILL 2018
Score = 42.4 bits (98), Expect = 0.001
Identities = 41/215 (19%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 218 KKKKKKKKGRMKKE------DNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQ 271
+K+K+ K+G KE D ++++E + + + ++++ S E E +++
Sbjct: 2198 RKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSS----EEEEEREE 2253
Query: 272 CSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKEN 331
+++++ R E E G+ K+ E+ E + K KK +K+ ++E E +E
Sbjct: 2254 EEEREEEEVREEEEERKEEEEGEEKQVEKEEEE----KKKKKKEKKKEEVQEKEEVFEEK 2309
Query: 332 RDI-------EISTEEEKDTGDL------KDSSLLKTKRKHKKKHKERHKMGEEVIPLRV 378
+I +S EEE++ ++ +LK +++ K + + R + L +
Sbjct: 2310 EEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQRRKSLRGRERVLSI 2369
Query: 379 LSKSEWMDLKKEYLALQKASMASLKKTISQIKSES 413
L + L + K+ + L T ++K ++
Sbjct: 2370 LRGVPHGKGRAIRLGVLKSPLKKLMSTALEMKEKT 2404
Score = 37.4 bits (85), Expect = 0.038
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 274 KKKKKRDRVEASSLPEVRTGKRKRSSS----EDAESLAPRSKVKKIIQ--KDIIKEASEA 327
KK K+RD + S+ P + + ++ E+A + S +I+ KD+ + +
Sbjct: 1101 KKTKERDSKQMSTEPGLLEDESGTEAAPIEMEEASVYSQWSSSTSVIKLSKDVDSQEKDI 1160
Query: 328 SKENRDIEISTEEE-KDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIP 375
SK++ + + ++ +D D K ++ K K+KHKKK KE + EE P
Sbjct: 1161 SKDHIALTLKRLQKIRDKRD-KKATAQKLKKKHKKKGKEAKVINEETTP 1208
Score = 35.8 bits (81), Expect = 0.11
Identities = 86/429 (20%), Positives = 164/429 (38%), Gaps = 55/429 (12%)
Query: 202 KTVKNKPIPALRVVE-EKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEG 260
KT + P + V+ E+K K K+ K+E ++ + E M T + K + E
Sbjct: 1394 KTFQKSPKQGRKAVQKERKVGKIKREMTKEERDMSEEVEEMATLEEKVVKQEGKLVMIER 1453
Query: 261 S-----------DIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPR 309
+ + + + + S K K + + E + + S + E L
Sbjct: 1454 TPSWQDWKKAWDEWKQVHGETRKSWKAWKEEWEKRLLQEEEKLHQAGEKLSPEEEMLQED 1513
Query: 310 SKVK----KIIQKDIIKEASEASKENRDIEISTEEE-KDTGDLKDSSLLKTKRKHKKKHK 364
K+K K + ++++ S+ + + E++ EEE G+ K+ + + +R +++HK
Sbjct: 1514 KKLKWEEWKQVWENMLSSKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTEEQRHIQEEHK 1573
Query: 365 -----------ERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSES 413
E+ + EE ++ + E + ++ LA ++ +A I+Q E
Sbjct: 1574 WARIHRKRARAEKKRAQEE---RKLAQEEEKLAQEERQLAQEERKLAQAYVKITQDDREM 1630
Query: 414 EM----------------ETDSGVPQNTGMKNEKTANREE--CRTQEKVNATGPQFVSGV 455
E S + K +K A + E R +EK+ G +
Sbjct: 1631 AQAEGKFAQKEETLAQRGEKLSQEAEKLAQKRKKLAKKWEKVAREEEKLAKKGGKLAEVK 1690
Query: 456 IVKIISTEPLPGRKQVRD----TLAAISEVLYVDLLEGDTECHARFKTPEDAQAVINAYT 511
+ E LP R+Q D LA E L D+ E + +
Sbjct: 1691 NILAQKVEELPQREQNLDWQEKELAQELEELEWDMEELSWKEEELNQEEGKLVEEKKKLA 1750
Query: 512 EINKKHCWKLEILSGDHEQ-RYWQKILVDRQAKLNQPREK-KRGTEKLITKAEKIRLAKT 569
E + W+ E LS + + +++L+ + KL Q +EK E+L K E++ K
Sbjct: 1751 EEEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQHKEKMPEEEERLGRKREQLIEKKM 1810
Query: 570 QQASKHIRF 578
+ A K R+
Sbjct: 1811 KLAQKRERW 1819
Score = 30.0 bits (66), Expect = 6.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 2 ETESGNQEKVMEEESTEKKKEVEKKK 27
E E G +++V +EE +KKK+ EKKK
Sbjct: 2271 EEEEGEEKQVEKEEEEKKKKKKEKKK 2296
Score = 29.6 bits (65), Expect = 8.0
Identities = 80/379 (21%), Positives = 163/379 (43%), Gaps = 46/379 (12%)
Query: 216 EEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKK 275
++ KKK KKKG+ K N + M+ T K+ + R S S ST S
Sbjct: 1186 QKLKKKHKKKGKEAKVINEETTPPVMEQPVTKKVKI-QGRGASGISGRRSTAGDG--SSW 1242
Query: 276 KKKRDRVEASSLPEVRTGKRKRSSSE----DAESLAPRSKVKKIIQK--DIIKEASEASK 329
+ R+ A + +T + ++E E L R ++ Q+ ++K+ S+
Sbjct: 1243 RDDLCRLMALRISGSQTKMSENLNAELVTFAQEMLVDRHPSWELFQEICPLLKKESKVLL 1302
Query: 330 ENRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKK 389
E+ D ++ E+K +++ ++ + + + RHK EV+P ++
Sbjct: 1303 EDLDWDVVPPEKKPI-FIQEGAIREDMIQGVTQEVIRHK---EVMP------------RE 1346
Query: 390 EYLALQKA-SMASLKKTISQIKSESEMETDSGVPQNTGMKNEKTANREECRTQEKVNATG 448
E A +KA M L++T Q+ + + P N M E + +EE +T +K G
Sbjct: 1347 EEQAQKKARDMLGLEET--QVILKKGKKVIFLEPGNVTMGKE-ISKKEEKKTFQKSPKQG 1403
Query: 449 PQFVS-----GVIVKIISTEPLPGRKQVRDTLAAISEVLYVDLLEGDTECHARFKTPEDA 503
+ V G I + ++ E ++V + +A + E + EG R + +D
Sbjct: 1404 RKAVQKERKVGKIKREMTKEERDMSEEVEE-MATLEEKVVKQ--EGKLVMIERTPSWQDW 1460
Query: 504 QAVINAYTEIN--KKHCWKLEILSGDHEQRYWQKILVDRQAKLNQPREKKRGTEKLITKA 561
+ + + +++ + WK + W+K L+ + KL+Q EK E+++ +
Sbjct: 1461 KKAWDEWKQVHGETRKSWKA-------WKEEWEKRLLQEEEKLHQAGEKLSPEEEMLQED 1513
Query: 562 EKIRLAKTQQASKHIRFSE 580
+K++ + +Q +++ S+
Sbjct: 1514 KKLKWEEWKQVWENMLSSK 1532
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 50.1 bits (118), Expect = 6e-06
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 215 VEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSK 274
+EEK+K+K +K + K +++ S+T + K +R + + E + SK
Sbjct: 515 LEEKRKQKAEKTKSSKTKGQGRSSVDLEESSTKSLEPKAARIKEVLKERKVLEKKVALSK 574
Query: 275 KKKKRDR-VEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRD 333
K+KK R VE +S K+K+ ED++ S+ + KE +SKE +
Sbjct: 575 KRKKDSRNVEENS-------KKKQQYEEDSKETLKTSEHCE-------KEKISSSKELKH 620
Query: 334 IEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHK--MGEEVIPLRVLSKSEWMDLKKEY 391
+ +E K L +S + + K++ K + HK VI V +++ D+K++
Sbjct: 621 VHAKSEPSKPARRLSESLHVVDENKNESKLEREHKRRTSTPVIMEGVQEETDTRDVKRQV 680
Query: 392 LALQKASMASLKKTISQIKSESEMETDSGVPQNTGMKNEKTANREECRT 440
SE+ T+ Q + +KNEK +++ T
Sbjct: 681 -------------------ERSEICTEEPQKQKSTLKNEKHLKKDDSET 710
Score = 43.9 bits (102), Expect = 4e-04
Identities = 53/279 (18%), Positives = 116/279 (41%), Gaps = 32/279 (11%)
Query: 174 ETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKK--------KKK 225
+TK Q +++ + + K + +K + + +V KK+KK KK
Sbjct: 530 KTKGQGRSSVDLEESSTKSLEPKAARIKEVLKERKVLEKKVALSKKRKKDSRNVEENSKK 589
Query: 226 GRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCS-----------K 274
+ +ED+ + + + IS K + S E ++P ++ S +
Sbjct: 590 KQQYEEDSKETLKTSEHCEKEKISSSKELKHVHAKS--EPSKPARRLSESLHVVDENKNE 647
Query: 275 KKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDI 334
K +R+ +S P + G ++ + + D + RS +I ++ K+ S E
Sbjct: 648 SKLEREHKRRTSTPVIMEGVQEETDTRDVKRQVERS---EICTEEPQKQKSTLKNEKH-- 702
Query: 335 EISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKM-GEEVIPLRVLSKSEWMDLKKEYLA 393
+++ +T LK SLLK + K K+ ER K E+ + ++ K + M +
Sbjct: 703 --LKKDDSETPHLK--SLLKKEVKSSKEKPEREKTPSEDKLSVKHKYKGDCMHKTGDETE 758
Query: 394 LQKASMA-SLKKTISQIKSESEMETDSGVPQNTGMKNEK 431
L + +++ I + ++++ +D + + +NE+
Sbjct: 759 LHSSEKGLKVEENIQKQSQQTKLSSDDKTERKSKHRNER 797
Score = 42.0 bits (97), Expect = 0.002
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 222 KKKKGRMKK---EDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKK 278
K+K+GR +K E ++ K+++ ++T I +++S +S+ +++ E K+ + +++
Sbjct: 2872 KRKRGRPRKYPVETTLKMKDDSK--TDTGIVTVEQSPSSSKLKVMQTDESNKETANLQER 2929
Query: 279 -------RDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKEN 331
+++ S R KR + S+DAES P K +K + + + + S E
Sbjct: 2930 SISNDDGEEKIVTSVRRRGRKPKRSLTVSDDAESSEPERKRQKSVSDPVEDKKEQESDEE 2989
Query: 332 RDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIP 375
+ E EE++ +G S+ ++ K + K EV P
Sbjct: 2990 EEEE---EEDEPSGATTRSTTRSEAQRSKTQLSPSIKRKREVSP 3030
Score = 38.1 bits (87), Expect = 0.022
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 236 AKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKR 295
A + +TSN S+ + S+ + ST+ ++ K S + T +
Sbjct: 217 AARASTETSNAKTSERASKKLPSQPTTDTSTDKERTSEDMADKEKSTADSGGEGLETAPK 276
Query: 296 KRSSSEDAESLAPRSKVKK---------IIQKDIIKEASEASKENRDIEISTEEEKDTGD 346
S E ++ P ++K ++ KD+ +E+SE ++ D + + G+
Sbjct: 277 ---SEEFSDLPCPVEEIKNYTKEHNNLILLNKDVQQESSEQKNKSTDKGEKKPDSNEKGE 333
Query: 347 LKDSSLLKTKRK--HKKKHKERHKMGE-------EVIPLRVLS-----KSEWMDLKKEYL 392
K KT++K H KK ++ K+ + EV L++ S K++ ++ KE
Sbjct: 334 RKKEKKEKTEKKFDHSKKSEDTQKVKDEKQAKEKEVESLKLPSEKNSNKAKTVEGTKEDF 393
Query: 393 ALQKASMASLKK-TISQIK----SESEMETDSGVPQNTGM-KNEKTANREECRTQEK 443
+L + + L T+S + S E +T+ V + M + E T++ EE Q K
Sbjct: 394 SLIDSDVDGLTDITVSSVHTSDLSSFEEDTEEEVVTSDSMEEGEITSDDEEKNKQNK 450
Score = 37.7 bits (86), Expect = 0.029
Identities = 56/296 (18%), Positives = 103/296 (34%), Gaps = 61/296 (20%)
Query: 172 EFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKKE 231
E + ++ K + L E P + K VK+ K+K ++ + E
Sbjct: 689 EPQKQKSTLKNEKHLKKDDSETPHLKSLLKKEVKSS------------KEKPEREKTPSE 736
Query: 232 DNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVR 291
D + K + + +G +E ++ K D+ E
Sbjct: 737 DKLSVKHKYKGDCMHKTGDETELHSSEKGLKVEENIQKQSQQTKLSSDDKTE-------- 788
Query: 292 TGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTEEEKDTGDLKDSS 351
++S + L+ K K + + IIK KEN E E
Sbjct: 789 ----RKSKHRNERKLSVLGKDGKPVSEYIIKTDENVRKENNKKERRLSAE---------- 834
Query: 352 LLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKS 411
KTK +HK + K+ + + + K+ + LQ+ S+ S
Sbjct: 835 --KTKAEHKSRRSSDSKI-----------QKDSLGSKQHGITLQRR---------SESYS 872
Query: 412 ESEMETDSGVPQNTGMKNEKTANREECRT----QEKVNATGPQFVSGVIVKIISTE 463
E + + DS ++ +K E+ ++E+ RT +EK+ G VK++ TE
Sbjct: 873 EDKCDMDS-TNMDSNLKPEEVVHKEKRRTKSLLEEKLVLKSKSKTQGKQVKVVETE 927
Score = 33.9 bits (76), Expect = 0.42
Identities = 81/423 (19%), Positives = 154/423 (36%), Gaps = 44/423 (10%)
Query: 176 KEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPALRVVEEKKKKKKKKGRMKK----- 230
K+ ++ E N ++ +KP K + K E+K+K +KK KK
Sbjct: 305 KDVQQESSEQKNKSTDKGEKKPDSNEKGERKK--------EKKEKTEKKFDHSKKSEDTQ 356
Query: 231 --EDNIQAKEENMDTSNTSISKMKRSRPTSEG---------SDIESTEPQKQCSKKKKKR 279
+D QAKE+ +++ K T EG SD++ S
Sbjct: 357 KVKDEKQAKEKEVESLKLPSEKNSNKAKTVEGTKEDFSLIDSDVDGLTDITVSSVHTSDL 416
Query: 280 DRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDIEISTE 339
E + EV T ++ + K Q E S + +
Sbjct: 417 SSFEEDTEEEVVTSDSMEEGEITSDDEEKNKQNKTKTQTSDSSEGKTKSVRHAYVHKPYL 476
Query: 340 EEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASM 399
K D D ++ +R+ K KE + ++ E ++ K++ QKA
Sbjct: 477 YSKYYSDSDDELTVEQRRQSIAKEKEERLLRRQI-------NREKLEEKRK----QKAEK 525
Query: 400 ASLKKTISQIKSESEMETDSGVPQNTGMKNEKTANREECRTQEKVNATGPQFVSGVIVKI 459
KT Q +S ++E S K +E ++KV + + V+
Sbjct: 526 TKSSKTKGQGRSSVDLEESSTKSLEPKAARIKEVLKERKVLEKKVALSKKRKKDSRNVEE 585
Query: 460 ISTEPLPGRKQVRDTLAAISEVLYVDLLEGDTE---CHARFKTPEDAQAVINAYTEINK- 515
S + + ++TL SE + + E HA+ + + A+ + + +++
Sbjct: 586 NSKKKQQYEEDSKETLKT-SEHCEKEKISSSKELKHVHAKSEPSKPARRLSESLHVVDEN 644
Query: 516 KHCWKLEILSGDHEQRYWQKILVDRQAKLNQPREKKRGTEKL-ITKAEKIRLAKTQQASK 574
K+ KLE +H++R ++++ + R+ KR E+ I E + T + K
Sbjct: 645 KNESKLE---REHKRRTSTPVIMEGVQEETDTRDVKRQVERSEICTEEPQKQKSTLKNEK 701
Query: 575 HIR 577
H++
Sbjct: 702 HLK 704
Score = 33.1 bits (74), Expect = 0.72
Identities = 48/260 (18%), Positives = 94/260 (36%), Gaps = 35/260 (13%)
Query: 214 VVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIE--------- 264
V EE++ K+K + + ++N D ++ I +R P +E D +
Sbjct: 2761 VEEEERHMPKRKRKQHYLSSEDEPDDNPDVLDSRIETAQRQCPETEPHDTKEENSRDLEE 2820
Query: 265 ----STEPQKQCSKKKKKRDRVEASSL----PEVRTGKRKRSSSEDAESLAPRS------ 310
S+E S+ +++D +S PE +S ED + R
Sbjct: 2821 LPKTSSETNSTTSRVMEEKDEYSSSETTGEKPEQNDDDTIKSQEEDQPIIIKRKRGRPRK 2880
Query: 311 -------KVKKIIQKD--IIKEASEASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHKK 361
K+K + D I+ S + + E K+T +L++ S+ + K
Sbjct: 2881 YPVETTLKMKDDSKTDTGIVTVEQSPSSSKLKVMQTDESNKETANLQERSISNDDGEEKI 2940
Query: 362 KHKERHKMGEEVIPLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESEMETDSGV 421
R + + P R L+ S+ + + QK+ ++ Q E E E +
Sbjct: 2941 VTSVRRRGRK---PKRSLTVSDDAESSEPERKRQKSVSDPVEDKKEQESDEEEEEEEEDE 2997
Query: 422 PQNTGMKNEKTANREECRTQ 441
P ++ + + +TQ
Sbjct: 2998 PSGATTRSTTRSEAQRSKTQ 3017
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 49.7 bits (117), Expect = 7e-06
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 215 VEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSK 274
VEEKK K+ K R ++D +K+E + + S + RSR S + S K+ S
Sbjct: 398 VEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSS 457
Query: 275 KKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEASKENRDI 334
K K + ++ KR RS S+ +SK +++ ++ K +R
Sbjct: 458 KHKNESK--------EKSNKRSRSGSQGRTDSVEKSK-----KREHSPSKEKSRKRSRSK 504
Query: 335 EISTEEEKDTGDLKDSSLLKTKRK----HKKKHKERHKMGEEVI 374
E S ++D D KD S +R+ ++ +++HK +E +
Sbjct: 505 ERS--HKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHKNKDETV 546
Score = 37.7 bits (86), Expect = 0.029
Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 45/285 (15%)
Query: 199 IFPKTVKNKPIPALRVVEE-------KKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKM 251
+FP+ P+P + +++ K KK K+G + + +++ + + S +
Sbjct: 217 LFPRI----PVPVQKNIDQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRS 272
Query: 252 -KRSRPTSE-----GS-----DIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSS 300
+RSR S GS ++E + +++ ++ K+R++ S R +R+RS S
Sbjct: 273 PRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRS 332
Query: 301 EDAESLAPRSKVKKIIQKDIIKEASEASKENR------DIEISTEEEKDTGDLKDSSLLK 354
+ RS+ +K ++D +E + ++ R D E E EK+ ++ S +
Sbjct: 333 RERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQ 392
Query: 355 TKR--KHKKKHKE-----RHK-----MGEEVIPLRVLSKSEWMDLKKEYLALQKASMASL 402
R +KKHKE RH+ +E R S+ + K S +
Sbjct: 393 RSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRS 452
Query: 403 KKTISQIKSESEMETD----SGVPQNTGMKNEKTANREECRTQEK 443
K+ S+ K+ES+ +++ SG T EK+ RE ++EK
Sbjct: 453 KEKSSKHKNESKEKSNKRSRSGSQGRTD-SVEKSKKREHSPSKEK 496
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,461,190
Number of Sequences: 37866
Number of extensions: 1021575
Number of successful extensions: 11758
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 797
Number of HSP's that attempted gapping in prelim test: 6456
Number of HSP's gapped (non-prelim): 4129
length of query: 582
length of database: 18,247,518
effective HSP length: 108
effective length of query: 474
effective length of database: 14,157,990
effective search space: 6710887260
effective search space used: 6710887260
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.