Guide to the Human Genome
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Name: MKI67IP Sequence: fasta or formatted (293aa) NCBI GI: 222352111
Description:

MKI67 interacting nucleolar phosphoprotein

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.7          8           1
 C cysteine            1.0          3           1
 D aspartate           4.4         13           3
 E glutamate           8.2         24           2
 F phenylalanine       5.5         16           1
 G glycine             3.8         11           1
 H histidine           1.4          4           1
 I isoleucine          3.8         11           1
 K lysine             11.9         35           5
 L leucine             7.5         22           2
 M methionine          1.4          4           1
 N asparagine          3.8         11           2
 P proline             5.8         17           2
 Q glutamine           6.5         19           1
 R arginine            8.2         24           3
 S serine              7.2         21           2
 T threonine           7.8         23           1
 V valine              6.5         19           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MKI67 interacting nucleolar phosphoprotein 
LARP7                 0.053   La ribonucleoprotein domain family, member 7 
LARP7                 0.053   La ribonucleoprotein domain family, member 7 
RBMX2                 0.048   RNA binding motif protein, X-linked 2 
CSTF2T                0.048   cleavage stimulation factor, 3' pre-RNA, subunit 2, ...
RBM34                 0.046   RNA binding motif protein 34 isoform 1 
CSTF2                 0.046   cleavage stimulation factor subunit 2 
ELAVL3                0.044   ELAV-like protein 3 isoform 1 
ELAVL3                0.044   ELAV-like protein 3 isoform 2 
ELAVL2                0.044   ELAV (embryonic lethal, abnormal vision, Drosophila...
DAZL                  0.043   deleted in azoospermia-like 
ELAVL4                0.041   ELAV-like 4 isoform 1 
ELAVL4                0.041   ELAV-like 4 isoform 5 
ELAVL4                0.041   ELAV-like 4 isoform 4 
ELAVL4                0.041   ELAV-like 4 isoform 3 
ELAVL4                0.041   ELAV-like 4 isoform 2 
SF3B4                 0.041   splicing factor 3b, subunit 4 
DAZ1                  0.039   deleted in azoospermia 
DAZ4                  0.039   deleted in azoospermia 4 isoform 1 
DAZ4                  0.039   deleted in azoospermia 4 isoform 2 
DAZ2                  0.039   deleted in azoospermia 2 isoform 1 
DAZ3                  0.039   deleted in azoospermia 3 
DAZ2                  0.039   deleted in azoospermia 2 isoform 3 
DAZ2                  0.039   deleted in azoospermia 2 isoform 2 
RAVER1                0.039   RAVER1 
TNRC4                 0.039   trinucleotide repeat containing 4 
PABPC4                0.039   poly A binding protein, cytoplasmic 4 isoform 3 [Ho...
PABPC4                0.039   poly A binding protein, cytoplasmic 4 isoform 2 [Homo...
PABPC4                0.039   poly A binding protein, cytoplasmic 4 isoform 1 [Ho...
ZCRB1                 0.039   zinc finger CCHC-type and RNA binding motif 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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