Search of human proteins with 149999382

Search of human proteins with 149999382

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|149999382 small inducible cytokine B10 precursor [Homo
sapiens]
         (98 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|149999382 small inducible cytokine B10 precursor [Homo sapiens]    196   4e-51
gi|4505187 small inducible cytokine B9 precursor [Homo sapiens]        69   6e-13
gi|4885589 small inducible cytokine B11 precursor [Homo sapiens]       61   2e-10
gi|4506851 chemokine (C-X-C motif) ligand 6 (granulocyte chemota...    56   5e-09
gi|5453577 chemokine (C-X-C motif) ligand 13 (B-cell chemoattrac...    51   2e-07
gi|4504155 chemokine (C-X-C motif) ligand 2 [Homo sapiens]             50   5e-07
gi|4506849 chemokine (C-X-C motif) ligand 5 precursor [Homo sapi...    48   1e-06
gi|4505981 pro-platelet basic protein precursor [Homo sapiens]         48   1e-06
gi|4504153 chemokine (C-X-C motif) ligand 1 [Homo sapiens]             47   3e-06
gi|4505733 platelet factor 4 (chemokine (C-X-C motif) ligand 4) ...    47   4e-06
gi|4505735 platelet factor 4 variant 1 [Homo sapiens]                  46   6e-06
gi|10834978 interleukin 8 precursor [Homo sapiens]                     43   5e-05
gi|54144650 chemokine (C-X-C motif) ligand 3 [Homo sapiens]            42   1e-04
gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    37   0.003
gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    37   0.003
gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    36   0.008
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]                 31   0.19 
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]                 30   0.41 
gi|122937388 MAX gene associated [Homo sapiens]                        28   2.1  
gi|221219042 pro-platelet basic protein-like 1 [Homo sapiens]          27   3.5  
gi|157885806 chromosome 12 open reading frame 51 [Homo sapiens]        27   3.5  
gi|239757832 PREDICTED: hypothetical protein [Homo sapiens]            26   6.0  
gi|31621309 leucine rich repeat containing 6 [Homo sapiens]            26   6.0  

>gi|149999382 small inducible cytokine B10 precursor [Homo
          sapiens]
          Length = 98

 Score =  196 bits (497), Expect = 4e-51
 Identities = 98/98 (100%), Positives = 98/98 (100%)

Query: 1  MNQTAILICCLIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRV 60
          MNQTAILICCLIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRV
Sbjct: 1  MNQTAILICCLIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRV 60

Query: 61 EIIATMKKKGEKRCLNPESKAIKNLLKAVSKERSKRSP 98
          EIIATMKKKGEKRCLNPESKAIKNLLKAVSKERSKRSP
Sbjct: 61 EIIATMKKKGEKRCLNPESKAIKNLLKAVSKERSKRSP 98


>gi|4505187 small inducible cytokine B9 precursor [Homo sapiens]
          Length = 125

 Score = 69.3 bits (168), Expect = 6e-13
 Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 11 LIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKG 70
          +I L L G+QG P+ R  RC+CIS +   ++ +SL+ L+    S  C ++EIIAT+ K G
Sbjct: 12 IILLVLIGVQGTPVVRKGRCSCISTNQGTIHLQSLKDLKQFAPSPSCEKIEIIATL-KNG 70

Query: 71 EKRCLNPESKAIKNLLKAVSKERSKR 96
           + CLNP+S  +K L+K   K+ S++
Sbjct: 71 VQTCLNPDSADVKELIKKWEKQVSQK 96


>gi|4885589 small inducible cytokine B11 precursor [Homo sapiens]
          Length = 94

 Score = 61.2 bits (147), Expect = 2e-10
 Identities = 29/92 (31%), Positives = 51/92 (55%)

Query: 1  MNQTAILICCLIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRV 60
          M+   + I   + L  + +QG P+ +  RC CI    + V    +EK  I+  S  C ++
Sbjct: 1  MSVKGMAIALAVILCATVVQGFPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKI 60

Query: 61 EIIATMKKKGEKRCLNPESKAIKNLLKAVSKE 92
          E+I T+K+   +RCLNP+SK  + ++K V ++
Sbjct: 61 EVIITLKENKGQRCLNPKSKQARLIIKKVERK 92


>gi|4506851 chemokine (C-X-C motif) ligand 6 (granulocyte
           chemotactic protein 2) [Homo sapiens]
          Length = 114

 Score = 56.2 bits (134), Expect = 5e-09
 Identities = 30/96 (31%), Positives = 60/96 (62%), Gaps = 7/96 (7%)

Query: 7   LICCLIFLTLSG--IQGVPLSRTV---RCTCISISNQPVNPRSLEKLEIIPASQFCPRVE 61
           L+  L+ LT  G      P+S  +   RCTC+ ++ + VNP+++ KL++ PA   C +VE
Sbjct: 21  LLALLLLLTPPGPLASAGPVSAVLTELRCTCLRVTLR-VNPKTIGKLQVFPAGPQCSKVE 79

Query: 62  IIATMKKKGEKRCLNPESKAIKNLLKAVSKERSKRS 97
           ++A++ K G++ CL+PE+  +K +++ +    +K++
Sbjct: 80  VVASL-KNGKQVCLDPEAPFLKKVIQKILDSGNKKN 114


>gi|5453577 chemokine (C-X-C motif) ligand 13 (B-cell
           chemoattractant) [Homo sapiens]
          Length = 109

 Score = 50.8 bits (120), Expect = 2e-07
 Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 3/94 (3%)

Query: 7   LICCLIFLTLSGIQGV--PLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIA 64
           L+  L+  +LS +QGV      ++RC C+  S+  +  R +++++I+P    CPR EII 
Sbjct: 8   LLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIV 67

Query: 65  TMKKKGEKRCLNPESKAIKNLLKAVSKERSKRSP 98
             K K    C++P+++ I+ +++ + K  S   P
Sbjct: 68  WKKNKSIV-CVDPQAEWIQRMMEVLRKRSSSTLP 100


>gi|4504155 chemokine (C-X-C motif) ligand 2 [Homo sapiens]
          Length = 107

 Score = 49.7 bits (117), Expect = 5e-07
 Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 7   LICCLIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATM 66
           L+  L+        G PL+  +RC C+  + Q ++ ++++ +++      C + E+IAT+
Sbjct: 20  LLLLLLVAASRRAAGAPLATELRCQCLQ-TLQGIHLKNIQSVKVKSPGPHCAQTEVIATL 78

Query: 67  KKKGEKRCLNPESKAIKNLLKAVSK 91
           K  G+K CLNP S  +K +++ + K
Sbjct: 79  KN-GQKACLNPASPMVKKIIEKMLK 102


>gi|4506849 chemokine (C-X-C motif) ligand 5 precursor [Homo
           sapiens]
          Length = 114

 Score = 48.1 bits (113), Expect = 1e-06
 Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 11/91 (12%)

Query: 8   ICCLIFLTLSGIQGVPLS---------RTVRCTCISISNQPVNPRSLEKLEIIPASQFCP 58
           +C L+ L L   Q  P++         R +RC C+  + Q V+P+ +  L++      C 
Sbjct: 18  LCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQ-TTQGVHPKMISNLQVFAIGPQCS 76

Query: 59  RVEIIATMKKKGEKRCLNPESKAIKNLLKAV 89
           +VE++A++ K G++ CL+PE+  +K +++ +
Sbjct: 77  KVEVVASL-KNGKEICLDPEAPFLKKVIQKI 106


>gi|4505981 pro-platelet basic protein precursor [Homo sapiens]
          Length = 128

 Score = 48.1 bits (113), Expect = 1e-06
 Identities = 22/60 (36%), Positives = 41/60 (68%), Gaps = 2/60 (3%)

Query: 28  VRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIKNLLK 87
           +RC CI  ++  ++P++++ LE+I     C +VE+IAT+ K G K CL+P++  IK +++
Sbjct: 61  LRCMCIKTTSG-IHPKNIQSLEVIGKGTHCNQVEVIATL-KDGRKICLDPDAPRIKKIVQ 118


>gi|4504153 chemokine (C-X-C motif) ligand 1 [Homo sapiens]
          Length = 107

 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 25/87 (28%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 11  LIFLTLSGIQ--GVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKK 68
           L+ L  +G +  G  ++  +RC C+  + Q ++P++++ + +      C + E+IAT+ K
Sbjct: 22  LLLLVAAGRRAAGASVATELRCQCLQ-TLQGIHPKNIQSVNVKSPGPHCAQTEVIATL-K 79

Query: 69  KGEKRCLNPESKAIKNLL-KAVSKERS 94
            G K CLNP S  +K ++ K ++ ++S
Sbjct: 80  NGRKACLNPASPIVKKIIEKMLNSDKS 106


>gi|4505733 platelet factor 4 (chemokine (C-X-C motif) ligand 4)
          [Homo sapiens]
          Length = 101

 Score = 46.6 bits (109), Expect = 4e-06
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 28 VRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIKNLLK 87
          ++C C+  ++Q V PR +  LE+I A   CP  ++IAT+ K G K CL+ ++   K ++K
Sbjct: 39 LQCLCVKTTSQ-VRPRHITSLEVIKAGPHCPTAQLIATL-KNGRKICLDLQAPLYKKIIK 96


>gi|4505735 platelet factor 4 variant 1 [Homo sapiens]
          Length = 104

 Score = 46.2 bits (108), Expect = 6e-06
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 28 VRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIKNLLK 87
          ++C C+  ++Q V PR +  LE+I A   CP  ++IAT+ K G K CL+ ++   K ++K
Sbjct: 42 LQCLCVKTTSQ-VRPRHITSLEVIKAGPHCPTAQLIATL-KNGRKICLDLQALLYKKIIK 99


>gi|10834978 interleukin 8 precursor [Homo sapiens]
          Length = 99

 Score = 43.1 bits (100), Expect = 5e-05
 Identities = 21/93 (22%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 2  NQTAILICCLIFLTLSGIQGVPLSRT---VRCTCISISNQPVNPRSLEKLEIIPASQFCP 58
          ++ A+ +     ++ +  +G  L R+   +RC CI   ++P +P+ +++L +I +   C 
Sbjct: 3  SKLAVALLAAFLISAALCEGAVLPRSAKELRCQCIKTYSKPFHPKFIKELRVIESGPHCA 62

Query: 59 RVEIIATMKKKGEKRCLNPESKAIKNLLKAVSK 91
            EII  +   G + CL+P+   ++ +++   K
Sbjct: 63 NTEIIVKL-SDGRELCLDPKENWVQRVVEKFLK 94


>gi|54144650 chemokine (C-X-C motif) ligand 3 [Homo sapiens]
          Length = 107

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 7   LICCLIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATM 66
           L+  L+        G  +   +RC C+  + Q ++ ++++ + +      C + E+IAT+
Sbjct: 20  LLLLLLVAASRRAAGASVVTELRCQCLQ-TLQGIHLKNIQSVNVRSPGPHCAQTEVIATL 78

Query: 67  KKKGEKRCLNPESKAIKNLLKAVSKERS 94
           K  G+K CLNP S  ++ +++ +  + S
Sbjct: 79  KN-GKKACLNPASPMVQKIIEKILNKGS 105


>gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal
          cell-derived factor 1) isoform beta [Homo sapiens]
          Length = 93

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 3/95 (3%)

Query: 1  MNQTAILICCLIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRV 60
          MN   +++  L+   L    G P+S + RC C    +  V   +++ L+I+        +
Sbjct: 1  MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESH-VARANVKHLKILNTPNCA--L 57

Query: 61 EIIATMKKKGEKRCLNPESKAIKNLLKAVSKERSK 95
          +I+A +K    + C++P+ K I+  L+    +R K
Sbjct: 58 QIVARLKNNNRQVCIDPKLKWIQEYLEKALNKRFK 92


>gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal
          cell-derived factor 1) isoform gamma [Homo sapiens]
          Length = 119

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 1  MNQTAILICCLIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRV 60
          MN   +++  L+   L    G P+S + RC C    +  V   +++ L+I+        +
Sbjct: 1  MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESH-VARANVKHLKILNTPNCA--L 57

Query: 61 EIIATMKKKGEKRCLNPESKAIKNLL-KAVSKER 93
          +I+A +K    + C++P+ K I+  L KA++K R
Sbjct: 58 QIVARLKNNNRQVCIDPKLKWIQEYLEKALNKGR 91


>gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal
          cell-derived factor 1) isoform alpha [Homo sapiens]
          Length = 89

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 1  MNQTAILICCLIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRV 60
          MN   +++  L+   L    G P+S + RC C    +  V   +++ L+I+        +
Sbjct: 1  MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESH-VARANVKHLKILNTPNCA--L 57

Query: 61 EIIATMKKKGEKRCLNPESKAIKNLL-KAVSK 91
          +I+A +K    + C++P+ K I+  L KA++K
Sbjct: 58 QIVARLKNNNRQVCIDPKLKWIQEYLEKALNK 89


>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
          Length = 114

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/84 (20%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 14 LTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKR 73
          LT   ++GV    + R TC+S++ Q +    ++   I   S     +  +  + K+G K 
Sbjct: 14 LTAYIVEGVGSEVSHRRTCVSLTTQRLPVSRIKTYTITEGS-----LRAVIFITKRGLKV 68

Query: 74 CLNPESKAIKNLLKAVSKERSKRS 97
          C +P++  ++++++++ ++ + R+
Sbjct: 69 CADPQATWVRDVVRSMDRKSNTRN 92


>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
          Length = 114

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 16/84 (19%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 14 LTLSGIQGVPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKR 73
          LT   ++GV    + + TC+S++ Q +    ++   I   S     +  +  + K+G K 
Sbjct: 14 LTAYIVEGVGSEVSDKRTCVSLTTQRLPVSRIKTYTITEGS-----LRAVIFITKRGLKV 68

Query: 74 CLNPESKAIKNLLKAVSKERSKRS 97
          C +P++  ++++++++ ++ + R+
Sbjct: 69 CADPQATWVRDVVRSMDRKSNTRN 92


>gi|122937388 MAX gene associated [Homo sapiens]
          Length = 3114

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 14   LTLSGIQGVP--LSRTVRCTCISISNQPVNPRSLEK----LEIIPASQFCPRVEIIATMK 67
            + LSGI G P    R      I ++   V+P ++++    L +IP  Q  P +  ++  +
Sbjct: 1771 IILSGINGSPPVSQRPENAAQIPVATPQVSPNTVKRAGPRLLLIPVQQGSPTLRPVSNTQ 1830

Query: 68   KKGEKRCLNP 77
             +G +  L P
Sbjct: 1831 LQGHRMVLQP 1840


>gi|221219042 pro-platelet basic protein-like 1 [Homo sapiens]
          Length = 126

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 57  CPRVEIIATMKKKGEKRCLNPESKAIKNLLK 87
           C +V++IA M K G K  L+PE+  IK +++
Sbjct: 87  CNKVQVIA-MLKDGRKMYLDPEAPRIKKIVQ 116


>gi|157885806 chromosome 12 open reading frame 51 [Homo sapiens]
          Length = 3996

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 16/53 (30%), Positives = 22/53 (41%)

Query: 45  LEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIKNLLKAVSKERSKRS 97
           L +L + P  Q CP ++    +        L P    I NLLK V  E  + S
Sbjct: 318 LWQLLMAPKDQICPEIQKEVCLAISSGLNILYPGETEINNLLKLVLTEGERNS 370


>gi|239757832 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 503

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 39  PVNPRSLEKLEIIPASQFCPRVEIIATMKKKG 70
           PV+P   E+ +  P +Q CPRV +    + +G
Sbjct: 470 PVHPPRPERQQQPPGAQGCPRVMLCVAPRNRG 501


>gi|31621309 leucine rich repeat containing 6 [Homo sapiens]
          Length = 466

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 36  SNQPVNPRS--LEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAI 82
           S +  N RS  +EKLE+ P+    P V  I   KK   +R   PE K I
Sbjct: 402 SREQTNTRSKHMEKLEVDPSKHSFPDVTNIVQEKKHTPRR--RPEPKII 448


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,483,211
Number of Sequences: 37866
Number of extensions: 129814
Number of successful extensions: 376
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 349
Number of HSP's gapped (non-prelim): 23
length of query: 98
length of database: 18,247,518
effective HSP length: 69
effective length of query: 29
effective length of database: 15,634,764
effective search space: 453408156
effective search space used: 453408156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.