Guide to the Human Genome
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Name: ATP13A2 Sequence: fasta or formatted (1180aa) NCBI GI: 13435129
Description:

ATPase type 13A2 isoform 1

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Other entries for this name:
alt prot [1175aa] ATPase type 13A2 isoform 2
alt prot [1158aa] ATPase type 13A2 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         97           3
 C cysteine            2.3         27           1
 D aspartate           3.4         40           2
 E glutamate           4.5         53           3
 F phenylalanine       3.3         39           1
 G glycine             6.9         81           2
 H histidine           1.7         20           1
 I isoleucine          3.8         45           2
 K lysine              3.1         36           2
 L leucine            13.8        163           4
 M methionine          2.5         29           2
 N asparagine          1.9         22           1
 P proline             7.5         89           2
 Q glutamine           4.7         56           2
 R arginine            5.6         66           2
 S serine              7.2         85           3
 T threonine           5.7         67           3
 V valine              9.9        117           3
 W tryptophan          1.3         15           1
 Y tyrosine            2.8         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase type 13A2 isoform 1 
ATP13A2               0.994   ATPase type 13A2 isoform 2 
ATP13A2               0.866   ATPase type 13A2 isoform 3 
ATP13A3               0.352   ATPase type 13A3 
ATP13A4               0.319   ATPase type 13A4 
ATP13A5               0.319   ATPase type 13A5 
ATP13A1               0.102   ATPase type 13A1 
ATP1A1                0.042   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A1                0.042   Na+/K+ -ATPase alpha 1 subunit isoform d 
ATP1A1                0.042   Na+/K+ -ATPase alpha 1 subunit isoform a 
ATP1A4                0.037   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP12A                0.034   hydrogen/potassium-exchanging ATPase 12A 
ATP2B2                0.031   plasma membrane calcium ATPase 2 isoform 1 
ATP2C2                0.031   ATPase, Ca++ transporting, type 2C, member 2 
ATP2B2                0.030   plasma membrane calcium ATPase 2 isoform 2 
ATP2B3                0.029   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.029   plasma membrane calcium ATPase 3 isoform 3a 
ATP2C1                0.029   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.029   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.029   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C1                0.029   calcium-transporting ATPase 2C1 isoform 1a 
ATP2B1                0.028   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.028   plasma membrane calcium ATPase 1 isoform 1b 
ATP10D                0.027   ATPase, class V, type 10D 
ATP2B4                0.026   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.026   plasma membrane calcium ATPase 4 isoform 4b 
ATP2A3                0.024   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.024   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.024   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.024   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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