Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 149588534
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149588534 ataxin 7-like 3 isoform b [Homo sapiens]
(347 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149588534 ataxin 7-like 3 isoform b [Homo sapiens] 711 0.0
gi|149588870 ataxin 7-like 3 isoform a [Homo sapiens] 704 0.0
gi|210147443 hypothetical protein LOC552889 [Homo sapiens] 99 7e-21
gi|163937854 ataxin 7-like 1 isoform 1 [Homo sapiens] 47 3e-05
gi|211971080 ataxin 7-like 1 isoform 3 [Homo sapiens] 47 3e-05
gi|93277115 ataxin 7-like 2 [Homo sapiens] 42 8e-04
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 40 0.002
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 40 0.002
gi|189491742 ataxin 7 isoform b [Homo sapiens] 40 0.004
gi|4506797 ataxin 7 isoform a [Homo sapiens] 40 0.004
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 39 0.005
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 37 0.026
gi|209977084 REST corepressor 3 isoform c [Homo sapiens] 37 0.034
gi|209977082 REST corepressor 3 isoform b [Homo sapiens] 37 0.034
gi|209977080 REST corepressor 3 isoform a [Homo sapiens] 37 0.034
gi|8922733 REST corepressor 3 isoform d [Homo sapiens] 37 0.034
gi|42734375 ankyrin repeat and sterile alpha motif domain contai... 37 0.034
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] 36 0.045
gi|203097003 Rho GTPase activating protein 21 [Homo sapiens] 36 0.058
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 35 0.076
gi|41055989 M-phase phosphoprotein 8 [Homo sapiens] 35 0.13
gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens] 35 0.13
gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens] 35 0.13
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens] 35 0.13
gi|52426743 cisplatin resistance-associated overexpressed protei... 35 0.13
gi|19923485 cisplatin resistance-associated overexpressed protei... 35 0.13
gi|50301232 synaptopodin 2-like isoform b [Homo sapiens] 35 0.13
gi|42718015 retinoblastoma binding protein 8 isoform a [Homo sap... 34 0.22
gi|4506441 retinoblastoma binding protein 8 isoform a [Homo sapi... 34 0.22
gi|110431370 espin [Homo sapiens] 33 0.29
>gi|149588534 ataxin 7-like 3 isoform b [Homo sapiens]
Length = 347
Score = 711 bits (1836), Expect = 0.0
Identities = 347/347 (100%), Positives = 347/347 (100%)
Query: 1 MKMEEMSLSGLDNSKLEAIAQEIYADLVEDSCLGFCFEVHRAVKCGYFFLDDTDPDSMKD 60
MKMEEMSLSGLDNSKLEAIAQEIYADLVEDSCLGFCFEVHRAVKCGYFFLDDTDPDSMKD
Sbjct: 1 MKMEEMSLSGLDNSKLEAIAQEIYADLVEDSCLGFCFEVHRAVKCGYFFLDDTDPDSMKD 60
Query: 61 FEIVDQPGLDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRI 120
FEIVDQPGLDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRI
Sbjct: 61 FEIVDQPGLDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRI 120
Query: 121 ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSNS 180
ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSNS
Sbjct: 121 ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSNS 180
Query: 181 DPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRIY 240
DPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRIY
Sbjct: 181 DPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRIY 240
Query: 241 FLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSENQGWGLGT 300
FLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSENQGWGLGT
Sbjct: 241 FLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSENQGWGLGT 300
Query: 301 NSSESRKTKKKKSHLSLVGTASGLGSNKKKKPKPPAPPTPSIYDDIN 347
NSSESRKTKKKKSHLSLVGTASGLGSNKKKKPKPPAPPTPSIYDDIN
Sbjct: 301 NSSESRKTKKKKSHLSLVGTASGLGSNKKKKPKPPAPPTPSIYDDIN 347
>gi|149588870 ataxin 7-like 3 isoform a [Homo sapiens]
Length = 354
Score = 704 bits (1818), Expect = 0.0
Identities = 347/354 (98%), Positives = 347/354 (98%), Gaps = 7/354 (1%)
Query: 1 MKMEEMSLSGLDNSKLEAIAQEIYADLVEDSCLGFCFEVHRAVKCGYFFLDDTDPDSMKD 60
MKMEEMSLSGLDNSKLEAIAQEIYADLVEDSCLGFCFEVHRAVKCGYFFLDDTDPDSMKD
Sbjct: 1 MKMEEMSLSGLDNSKLEAIAQEIYADLVEDSCLGFCFEVHRAVKCGYFFLDDTDPDSMKD 60
Query: 61 FEIVDQPGLDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRI 120
FEIVDQPGLDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRI
Sbjct: 61 FEIVDQPGLDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRI 120
Query: 121 ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDK-------NPNSPRRSKSLKHK 173
ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDK NPNSPRRSKSLKHK
Sbjct: 121 ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKLWYLPFQNPNSPRRSKSLKHK 180
Query: 174 NGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQ 233
NGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQ
Sbjct: 181 NGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQ 240
Query: 234 RRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSEN 293
RRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSEN
Sbjct: 241 RRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSEN 300
Query: 294 QGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNKKKKPKPPAPPTPSIYDDIN 347
QGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNKKKKPKPPAPPTPSIYDDIN
Sbjct: 301 QGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNKKKKPKPPAPPTPSIYDDIN 354
>gi|210147443 hypothetical protein LOC552889 [Homo sapiens]
Length = 97
Score = 98.6 bits (244), Expect = 7e-21
Identities = 45/61 (73%), Positives = 53/61 (86%)
Query: 3 MEEMSLSGLDNSKLEAIAQEIYADLVEDSCLGFCFEVHRAVKCGYFFLDDTDPDSMKDFE 62
MEE+SL+ LD +KLEAIAQEIY DL+EDSCLGFCFEVHRAVKCGYF+L+ + S+KDF
Sbjct: 1 MEEISLANLDTNKLEAIAQEIYVDLIEDSCLGFCFEVHRAVKCGYFYLEFAETGSVKDFG 60
Query: 63 I 63
I
Sbjct: 61 I 61
>gi|163937854 ataxin 7-like 1 isoform 1 [Homo sapiens]
Length = 861
Score = 46.6 bits (109), Expect = 3e-05
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 27/176 (15%)
Query: 171 KHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHT 230
KH+NG +++ P++ +S P + CGV+ TKK CTRSL C H+
Sbjct: 271 KHQNGTKNSNKPYRR-----LSEREFDPNK-------HCGVLDPETKKPCTRSLTCKTHS 318
Query: 231 DEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKT 290
RR V +L E ++ + ++ D + L++ + ++ PS SG ++
Sbjct: 319 LSHRRAVPGRKKQFDLLLAEHKAK--SREKEVKDKEHLLT-----STREILPSQSGPAQD 371
Query: 291 S---ENQGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNKKKK-----PKPPAPP 338
S + G + K++ S L +A+ + S+ P+PP PP
Sbjct: 372 SLLGSSGSSGPEPKVASPAKSRPPNSVLPRPSSANSISSSTSSNHSGHTPEPPLPP 427
>gi|211971080 ataxin 7-like 1 isoform 3 [Homo sapiens]
Length = 738
Score = 46.6 bits (109), Expect = 3e-05
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 27/176 (15%)
Query: 171 KHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHT 230
KH+NG +++ P++ +S P + CGV+ TKK CTRSL C H+
Sbjct: 147 KHQNGTKNSNKPYRR-----LSEREFDPNK-------HCGVLDPETKKPCTRSLTCKTHS 194
Query: 231 DEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKT 290
RR V +L E ++ + ++ D + L++ + ++ PS SG ++
Sbjct: 195 LSHRRAVPGRKKQFDLLLAEHKAK--SREKEVKDKEHLLT-----STREILPSQSGPAQD 247
Query: 291 S---ENQGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNKKKK-----PKPPAPP 338
S + G + K++ S L +A+ + S+ P+PP PP
Sbjct: 248 SLLGSSGSSGPEPKVASPAKSRPPNSVLPRPSSANSISSSTSSNHSGHTPEPPLPP 303
>gi|93277115 ataxin 7-like 2 [Homo sapiens]
Length = 722
Score = 42.0 bits (97), Expect = 8e-04
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 205 LTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVR 238
L QCGVI+ TKK+CTR L C H+ QRR V+
Sbjct: 239 LNRQCGVINPETKKICTRLLTCKIHSVHQRREVQ 272
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 40.4 bits (93), Expect = 0.002
Identities = 56/216 (25%), Positives = 85/216 (39%), Gaps = 37/216 (17%)
Query: 123 SNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKS-DKNPNSPRRSKSLKHKNGELSNSD 181
+ + KS S + +D+ +Y +++ ++ KS DKNP R L+ +N + S+ +
Sbjct: 1492 TGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETKSVDKNPCKDREKHVLEARNNKESSGN 1551
Query: 182 PFKYNNSTGISYETLGPEELRSLLTTQCGVISEHT---KKMCTRSLRCPQHTDEQRRTVR 238
Y L P E + G I + T K + S R +D R T
Sbjct: 1552 KLLY---------ILNPPETQVEKEQITGQIDKSTVKPKPQLSHSSRLS--SDLTRETDE 1600
Query: 239 IYFL-------GPSAVLPEVESSLDNDSFDMTDS---------------QALISRLQWDG 276
F S V + E S N S D+ D Q ISR Q
Sbjct: 1601 AAFEPDYNESDSESNVSVKEEESSGNISKDLKDKIVEKAKESLDTAAVVQVGISRNQSHS 1660
Query: 277 SSDLSPSDSGSSKTSENQGWGLGTNSSESRKTKKKK 312
S +SPS S S S+ + +S+ES+ +KKKK
Sbjct: 1661 SPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKK 1696
Score = 29.3 bits (64), Expect = 5.4
Identities = 22/82 (26%), Positives = 33/82 (40%)
Query: 108 MGRNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRS 167
+G+ +S I N SN + E + E ++ I E + KS KN S +
Sbjct: 1308 VGKPASVIKNVSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKSSKNSASSEKG 1367
Query: 168 KSLKHKNGELSNSDPFKYNNST 189
K+ L +P K NST
Sbjct: 1368 KTKDRDYSVLEKENPEKRKNST 1389
Score = 29.3 bits (64), Expect = 5.4
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 106 LGMGRNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPR 165
+G+ RN S ++ ++ S + + S S + + S S+KK KK++ K+ +
Sbjct: 1651 VGISRNQSH-SSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKK 1709
Query: 166 RSKSLKHKNGEL 177
K KH E+
Sbjct: 1710 HKKHKKHAGTEV 1721
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 40.4 bits (93), Expect = 0.002
Identities = 56/216 (25%), Positives = 85/216 (39%), Gaps = 37/216 (17%)
Query: 123 SNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKS-DKNPNSPRRSKSLKHKNGELSNSD 181
+ + KS S + +D+ +Y +++ ++ KS DKNP R L+ +N + S+ +
Sbjct: 1526 TGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETKSVDKNPCKDREKHVLEARNNKESSGN 1585
Query: 182 PFKYNNSTGISYETLGPEELRSLLTTQCGVISEHT---KKMCTRSLRCPQHTDEQRRTVR 238
Y L P E + G I + T K + S R +D R T
Sbjct: 1586 KLLY---------ILNPPETQVEKEQITGQIDKSTVKPKPQLSHSSRLS--SDLTRETDE 1634
Query: 239 IYFL-------GPSAVLPEVESSLDNDSFDMTDS---------------QALISRLQWDG 276
F S V + E S N S D+ D Q ISR Q
Sbjct: 1635 AAFEPDYNESDSESNVSVKEEESSGNISKDLKDKIVEKAKESLDTAAVVQVGISRNQSHS 1694
Query: 277 SSDLSPSDSGSSKTSENQGWGLGTNSSESRKTKKKK 312
S +SPS S S S+ + +S+ES+ +KKKK
Sbjct: 1695 SPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKK 1730
Score = 29.3 bits (64), Expect = 5.4
Identities = 22/82 (26%), Positives = 33/82 (40%)
Query: 108 MGRNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRS 167
+G+ +S I N SN + E + E ++ I E + KS KN S +
Sbjct: 1342 VGKPASVIKNVSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKSSKNSASSEKG 1401
Query: 168 KSLKHKNGELSNSDPFKYNNST 189
K+ L +P K NST
Sbjct: 1402 KTKDRDYSVLEKENPEKRKNST 1423
Score = 29.3 bits (64), Expect = 5.4
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 106 LGMGRNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPR 165
+G+ RN S ++ ++ S + + S S + + S S+KK KK++ K+ +
Sbjct: 1685 VGISRNQSH-SSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKK 1743
Query: 166 RSKSLKHKNGEL 177
K KH E+
Sbjct: 1744 HKKHKKHAGTEV 1755
>gi|189491742 ataxin 7 isoform b [Homo sapiens]
Length = 945
Score = 39.7 bits (91), Expect = 0.004
Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Query: 209 CGVISEHTKKMCTRSLRCPQHTDEQRRTVRIYFLGPSAVLPEVES-SLDNDSFDMTDSQA 267
CGVI TKK CTRSL C H+ QRR V+ +L E ++ + + + DSQ
Sbjct: 347 CGVIDLDTKKPCTRSLTCKTHSLTQRRAVQGRRKRFDVLLAEHKNKTREKELIRHPDSQQ 406
Query: 268 LISRLQWDGSSDLSPSDSGSSKTSENQGWGLGTNSSESRKTKKKKSHLSLV----GTASG 323
L+ D P+ +S+ G+ + S+ K K H + G +
Sbjct: 407 PPQPLR-----DPHPAPPRTSQEPHQNPHGVIPSESKPFVASKPKPHTPSLPRPPGCPAQ 461
Query: 324 LGSNKKKKPKP----PAPPTPS 341
G + P P P PP P+
Sbjct: 462 QGGSAPIDPPPVHESPHPPLPA 483
>gi|4506797 ataxin 7 isoform a [Homo sapiens]
Length = 892
Score = 39.7 bits (91), Expect = 0.004
Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Query: 209 CGVISEHTKKMCTRSLRCPQHTDEQRRTVRIYFLGPSAVLPEVES-SLDNDSFDMTDSQA 267
CGVI TKK CTRSL C H+ QRR V+ +L E ++ + + + DSQ
Sbjct: 347 CGVIDLDTKKPCTRSLTCKTHSLTQRRAVQGRRKRFDVLLAEHKNKTREKELIRHPDSQQ 406
Query: 268 LISRLQWDGSSDLSPSDSGSSKTSENQGWGLGTNSSESRKTKKKKSHLSLV----GTASG 323
L+ D P+ +S+ G+ + S+ K K H + G +
Sbjct: 407 PPQPLR-----DPHPAPPRTSQEPHQNPHGVIPSESKPFVASKPKPHTPSLPRPPGCPAQ 461
Query: 324 LGSNKKKKPKP----PAPPTPS 341
G + P P P PP P+
Sbjct: 462 QGGSAPIDPPPVHESPHPPLPA 483
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 39.3 bits (90), Expect = 0.005
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 25/185 (13%)
Query: 122 NSNNMNKSES-DQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSNS 180
+S++ N S+S D D+ D +D+ S S+ + K +SD + + + S + + NS
Sbjct: 595 SSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNS 654
Query: 181 DPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRIY 240
D +NS+ S + + S ++ S+ + + +
Sbjct: 655 DSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSN----------------- 697
Query: 241 FLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSENQGWGLGT 300
S+ + S D+DS D +DS S D S S S SS +S++ +
Sbjct: 698 ----SSESSDSSDSSDSDSSDSSDSSNSNSS---DSDSSNSSDSSDSSNSSDSSDSSDSS 750
Query: 301 NSSES 305
NSS+S
Sbjct: 751 NSSDS 755
Score = 38.9 bits (89), Expect = 0.007
Identities = 44/208 (21%), Positives = 78/208 (37%), Gaps = 13/208 (6%)
Query: 107 GMGRNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRR 166
G G N + ++ + + S+SD D+ + +D+ S S+ SD + +
Sbjct: 528 GNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDS 587
Query: 167 SKSLKHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRC 226
S S + + SNS ++ + S ++ + +S + S+ K +
Sbjct: 588 SDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNS 647
Query: 227 PQHTDEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLS-PSDS 285
+D S SS +DS D +DS S SSD S SDS
Sbjct: 648 SDSSDN------------SDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDS 695
Query: 286 GSSKTSENQGWGLGTNSSESRKTKKKKS 313
+S S + ++SS+S + S
Sbjct: 696 SNSSESSDSSDSSDSDSSDSSDSSNSNS 723
Score = 38.1 bits (87), Expect = 0.012
Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 18/205 (8%)
Query: 111 NSSRIANRRIANSNNMNKSESDQEDNDDINDN-DWSYGSEKKAKKRKSDKNPNSPRRSKS 169
+SS +N ++ ++ + + SD D+ D +D+ D S S+ SD + +S S
Sbjct: 745 DSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSS 804
Query: 170 LKHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQH 229
+ + S+S +NS+ S + + S ++ S+ + +
Sbjct: 805 NSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNS 864
Query: 230 TDEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSK 289
+D + +SS +DS D +DS S D S + SDS SS
Sbjct: 865 SDSSDSS---------------DSSNSSDSSDSSDSNE--SSNSSDSSDSSNSSDSDSSD 907
Query: 290 TSENQGWGLGTNSSESRKTKKKKSH 314
+S + +NSS+S ++ +
Sbjct: 908 SSNSSDSSDSSNSSDSSESSNSSDN 932
Score = 37.7 bits (86), Expect = 0.015
Identities = 43/206 (20%), Positives = 76/206 (36%), Gaps = 2/206 (0%)
Query: 111 NSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSL 170
NSS +N ++ ++ + SD D+ D +D+D S S+ SD + +S S
Sbjct: 822 NSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSD 881
Query: 171 KHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHT 230
+ E SNS ++++ S + S ++ SE + + ++
Sbjct: 882 SSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNS 941
Query: 231 DEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKT 290
+ + S+ +SS +DS D S + S D S SDS S
Sbjct: 942 SDSSDSSDSSNSSDSS--NSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSD 999
Query: 291 SENQGWGLGTNSSESRKTKKKKSHLS 316
S N ++ S S+ S
Sbjct: 1000 SSNSSDSSDSSDSSDSSNSSDSSNSS 1025
Score = 37.0 bits (84), Expect = 0.026
Identities = 42/221 (19%), Positives = 78/221 (35%), Gaps = 8/221 (3%)
Query: 111 NSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSL 170
NSS ++ ++ ++ + + SD D+ D +D+ S S + S + NS S S
Sbjct: 646 NSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSS 705
Query: 171 KHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHT 230
+ + S+S +NS+ S + + S +
Sbjct: 706 DSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSS 765
Query: 231 DEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKT 290
D + S +SS +DS D ++S D S+ SDS S
Sbjct: 766 DSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSS--------DSSNSSDSSDSSDSSD 817
Query: 291 SENQGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNKKKK 331
S++ +NSS+S + ++ G S+ +
Sbjct: 818 SDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNR 858
Score = 36.6 bits (83), Expect = 0.034
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 7/191 (3%)
Query: 121 ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSN- 179
++S++ + S+S N + +D+D S S+ SD + +S + S + + SN
Sbjct: 705 SDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNS 764
Query: 180 ---SDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRT 236
SD ++S+ S + + S ++ S+ + + +D +
Sbjct: 765 SDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSS 824
Query: 237 VRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPS--DSGSSKTSENQ 294
S +SS +DS D +DS + +R SSD S S S SS +S++
Sbjct: 825 DSSNSSDSSDSSNSSDSSDSSDSSDGSDSDS-SNRSDSSNSSDSSDSSDSSNSSDSSDSS 883
Query: 295 GWGLGTNSSES 305
+NSS+S
Sbjct: 884 DSNESSNSSDS 894
Score = 36.6 bits (83), Expect = 0.034
Identities = 43/196 (21%), Positives = 75/196 (38%), Gaps = 4/196 (2%)
Query: 111 NSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSL 170
NSS +N ++ ++ + +D N +D S S SD + S S +
Sbjct: 799 NSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNR 858
Query: 171 KHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHT 230
+ +SD +NS+ S + E S ++ S+ + S +
Sbjct: 859 SDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNS---SDSS 915
Query: 231 DEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTD-SQALISRLQWDGSSDLSPSDSGSSK 289
D + S +SS +DS D +D S + S D S+ SDS SS
Sbjct: 916 DSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSD 975
Query: 290 TSENQGWGLGTNSSES 305
+S++ ++SS+S
Sbjct: 976 SSDSSNSSDSSDSSDS 991
Score = 35.8 bits (81), Expect = 0.058
Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 2/196 (1%)
Query: 111 NSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSL 170
N S +N ++ ++ + + SD D+ D N++ S S + SD + +S S
Sbjct: 857 NRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSD 916
Query: 171 KHKNGELSNSDPFKYN-NSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQH 229
+ + S S N NS+ S + + S ++ S+ + +
Sbjct: 917 SSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDS 976
Query: 230 TDEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSK 289
+D + S +SS +DS D +DS + SSD S + S SS
Sbjct: 977 SDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSD-SSNSSDSSD 1035
Query: 290 TSENQGWGLGTNSSES 305
+S++ ++SS+S
Sbjct: 1036 SSDSSDSSDSSDSSDS 1051
Score = 34.7 bits (78), Expect = 0.13
Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 6/195 (3%)
Query: 111 NSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSL 170
+SS ++ ++ +N + + SD D+ + +D+D S S S+ + +S + S
Sbjct: 872 DSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSD 931
Query: 171 KHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHT 230
+ + SNS ++S+ S + + S ++ S+ + S +
Sbjct: 932 NSNSSDSSNS-----SDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSS 986
Query: 231 DEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKT 290
D + S +SS +DS + +DS SSD S S S SS +
Sbjct: 987 DSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDS-SDSSDS 1045
Query: 291 SENQGWGLGTNSSES 305
S++ +NSS+S
Sbjct: 1046 SDSSDSSDSSNSSDS 1060
Score = 33.9 bits (76), Expect = 0.22
Identities = 47/205 (22%), Positives = 77/205 (37%), Gaps = 23/205 (11%)
Query: 122 NSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSL----------- 170
+S++ N S+SD D+ + +D+ S S ++ S N NS S S
Sbjct: 894 SSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNS 953
Query: 171 --KHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQ 228
+ + SNS +NS+ S + + S ++ S+ + + S
Sbjct: 954 SDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNS--SDSSDSSD 1011
Query: 229 HTDEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPS----- 283
+D + S +SS +DS D +DS SSD S S
Sbjct: 1012 SSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSD 1071
Query: 284 ---DSGSSKTSENQGWGLGTNSSES 305
S SS +SE+ +NSS+S
Sbjct: 1072 SSDSSDSSDSSESSDSSDSSNSSDS 1096
Score = 32.7 bits (73), Expect = 0.49
Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 2/185 (1%)
Query: 121 ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSNS 180
+++NN + + + NDD + +D G + SD + +S S + S+S
Sbjct: 519 SDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSS 578
Query: 181 DPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRIY 240
D ++ + S ++ + S ++ S+ + + + E +
Sbjct: 579 DSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSS-DSD 637
Query: 241 FLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSENQGWGLGT 300
S+ +SS ++DS D ++S SSD S S S SS +S++ +
Sbjct: 638 SKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSD-SSSSSDSSNSSDSSDSSDSS 696
Query: 301 NSSES 305
NSSES
Sbjct: 697 NSSES 701
Score = 32.7 bits (73), Expect = 0.49
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 5/198 (2%)
Query: 111 NSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSL 170
+SS ++ +NS++ + S + + +D + +D S S+ SD + +S + S
Sbjct: 961 DSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSD 1020
Query: 171 KHKNGELSNS-DPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQH 229
+ + SNS D ++S+ S + + S ++ S+ + + S
Sbjct: 1021 SSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDS--SDSSDSSDS 1078
Query: 230 TDEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPS--DSGS 287
+D + S +SS +DS D +DS SSD S S S S
Sbjct: 1079 SDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDS 1138
Query: 288 SKTSENQGWGLGTNSSES 305
S +S++ ++SS+S
Sbjct: 1139 SNSSDSSDSSESSDSSDS 1156
Score = 32.3 bits (72), Expect = 0.64
Identities = 37/187 (19%), Positives = 72/187 (38%), Gaps = 2/187 (1%)
Query: 121 ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSN- 179
++S+N + S + ++ +D S S+ + N NS S + + SN
Sbjct: 681 SDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNS 740
Query: 180 SDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRI 239
SD ++S+ S + + S ++ S+ + + ++ + +
Sbjct: 741 SDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNS 800
Query: 240 YFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLS-PSDSGSSKTSENQGWGL 298
S+ + S D+DS + +DS SSD S SDS S++
Sbjct: 801 SDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSD 860
Query: 299 GTNSSES 305
+NSS+S
Sbjct: 861 SSNSSDS 867
Score = 32.0 bits (71), Expect = 0.84
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 4/187 (2%)
Query: 122 NSNNMNKSESDQEDN--DDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSN 179
+S++ N S+S + N D+ N +D S S+ S+ + +S S + + ++
Sbjct: 914 SSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNS 973
Query: 180 SDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKM-CTRSLRCPQHTDEQRRTVR 238
SD +NS+ S + + S ++ S+ + + S +D +
Sbjct: 974 SDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDS 1033
Query: 239 IYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSENQGWGL 298
S +SS +DS + +DS SSD S S S SS++S++
Sbjct: 1034 SDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDS-SDSSESSDSSDSSN 1092
Query: 299 GTNSSES 305
++SS+S
Sbjct: 1093 SSDSSDS 1099
Score = 30.8 bits (68), Expect = 1.9
Identities = 43/195 (22%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 111 NSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSL 170
NSS +N +++++ + SD D+ D +D+ S S + S + +S S S
Sbjct: 1017 NSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSS 1076
Query: 171 KHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHT 230
+ S SD +NS+ S + + S ++ S+ + + +
Sbjct: 1077 DSSDSSES-SDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDS 1135
Query: 231 DEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKT 290
+ + S ESS +DS D +DS SSD S + S SS +
Sbjct: 1136 SDSSNS--------SDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSD-SSNSSDSSDS 1186
Query: 291 SENQGWGLGTNSSES 305
S++ ++SS+S
Sbjct: 1187 SDSSDSSDSSDSSDS 1201
Score = 30.4 bits (67), Expect = 2.4
Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 11/185 (5%)
Query: 121 ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSNS 180
++S+N + S + +D N +D S S+ SD + +S S +S
Sbjct: 998 SDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSS--------DSS 1049
Query: 181 DPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRIY 240
D +NS+ S + + S ++ SE + + S +D +
Sbjct: 1050 DSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDS--SDSSNSSDSSDSSDSSDSSD 1107
Query: 241 FLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSENQGWGLGT 300
S +SS +DS D +DS SSD S S S SS +S++ +
Sbjct: 1108 SSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSES-SDSSDSSDSSDSSDSS 1166
Query: 301 NSSES 305
+SS+S
Sbjct: 1167 DSSDS 1171
Score = 29.3 bits (64), Expect = 5.4
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 8/191 (4%)
Query: 122 NSNNMNKSES-DQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSN- 179
+S++ N S+S D D+ D +D+ S S ++ S + NS S S + S+
Sbjct: 1051 SSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSD 1110
Query: 180 ----SDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKM-CTRSLRCPQHTDEQR 234
SD +NS+ S + + S ++ SE + + S +D
Sbjct: 1111 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSD 1170
Query: 235 RTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSENQ 294
+ S +SS +DS D +DS SSD S S S SS +S++
Sbjct: 1171 SSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS-SDSSDSSDSS 1229
Query: 295 GWGLGTNSSES 305
++SS+S
Sbjct: 1230 DSNESSDSSDS 1240
Score = 28.9 bits (63), Expect = 7.1
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 121 ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLK-HKNGELSN 179
++SN + S + +D N +D S S+ + SD N S +SKS + NG S+
Sbjct: 1229 SDSNESSDSSDSSDSSDSSNSSDSSDSSD--SSDSTSDSNDESDSQSKSGNGNNNGSDSD 1286
Query: 180 SD 181
SD
Sbjct: 1287 SD 1288
Score = 28.5 bits (62), Expect = 9.3
Identities = 43/208 (20%), Positives = 72/208 (34%), Gaps = 15/208 (7%)
Query: 121 ANSNNMNKSESDQEDNDDINDNDWSYGS-EKKAKKRKSDKNPNSPRRSKSLKHKNGELSN 179
++ +N N + + DN+ + D SY S E K SD S S N SN
Sbjct: 468 SDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSN 527
Query: 180 SDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRI 239
+ N+ S G + ++ S+ + + S +D
Sbjct: 528 GNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSD--- 584
Query: 240 YFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSENQGWGLG 299
S+ + +SS ++S D +DS D S SDS SK+ ++
Sbjct: 585 ---SDSSDSSDSDSSDSSNSSDSSDSS--------DSSDSSDSSDSSDSKSDSSKSESDS 633
Query: 300 TNSSESRKTKKKKSHLSLVGTASGLGSN 327
++S + S S + S SN
Sbjct: 634 SDSDSKSDSSDSNSSDSSDNSDSSDSSN 661
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 37.0 bits (84), Expect = 0.026
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 121 ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSK-SLKHKNGELSN 179
++S++ + S SD + + D +D++ + +E+K+KKRK NS + K K K + S
Sbjct: 198 SSSSSDSDSSSDSQSSSDSSDSESA--TEEKSKKRKKKHRKNSRKHKKEKKKRKKSKKSA 255
Query: 180 SDPFKYNNSTGISYETLGPEEL 201
S + N T+ PEE+
Sbjct: 256 SSESEAENLEAQPQSTVRPEEI 277
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 110 RNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKR-KSDKNPNSPRRSK 168
RN S NR+ + +S+ ++ D +++ + K KKR KS S +SK
Sbjct: 410 RNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSK 469
Query: 169 SLKHKNGELSNSDPFKYNNSTGISYETLGPEELRS 203
S + + N + + S G +E + +E +S
Sbjct: 470 SKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQS 504
Score = 31.2 bits (69), Expect = 1.4
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 253 SSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSENQGWGLGTNSSESRKTKKKK 312
SS +DS +DSQ+ SSD S S+S + + S+ + NS + +K KKK+
Sbjct: 198 SSSSSDSDSSSDSQS---------SSDSSDSESATEEKSKKRKKKHRKNSRKHKKEKKKR 248
Query: 313 SHLSLVGTASGLGSNKKKKPKPPAPP 338
++ N + +P+ P
Sbjct: 249 KKSKKSASSESEAENLEAQPQSTVRP 274
>gi|209977084 REST corepressor 3 isoform c [Homo sapiens]
Length = 449
Score = 36.6 bits (83), Expect = 0.034
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 118 RRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSP-------RRSKSL 170
R++AN +N S+ D E+ ++ ND Y +K+AKK + + P R +SL
Sbjct: 203 RKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSL 262
Query: 171 KHKN 174
+H++
Sbjct: 263 QHRH 266
>gi|209977082 REST corepressor 3 isoform b [Homo sapiens]
Length = 436
Score = 36.6 bits (83), Expect = 0.034
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 118 RRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSP-------RRSKSL 170
R++AN +N S+ D E+ ++ ND Y +K+AKK + + P R +SL
Sbjct: 203 RKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSL 262
Query: 171 KHKN 174
+H++
Sbjct: 263 QHRH 266
>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
Length = 553
Score = 36.6 bits (83), Expect = 0.034
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 118 RRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSP-------RRSKSL 170
R++AN +N S+ D E+ ++ ND Y +K+AKK + + P R +SL
Sbjct: 203 RKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSL 262
Query: 171 KHKN 174
+H++
Sbjct: 263 QHRH 266
>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
Length = 495
Score = 36.6 bits (83), Expect = 0.034
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 118 RRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSP-------RRSKSL 170
R++AN +N S+ D E+ ++ ND Y +K+AKK + + P R +SL
Sbjct: 145 RKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSL 204
Query: 171 KHKN 174
+H++
Sbjct: 205 QHRH 208
>gi|42734375 ankyrin repeat and sterile alpha motif domain
containing 3 [Homo sapiens]
Length = 656
Score = 36.6 bits (83), Expect = 0.034
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 82 KECVCPNCSRSIAASRFAPHLEK---CLGMGRNSSRIANRRIANSNNMNKSESDQEDNDD 138
++ P R + +S + E+ C +G S ++ +A + ++ SE+ E N+D
Sbjct: 316 RDVTSPINERDVESSSSSSSREEHAFCANLGPVQSSSSSEGLARAQGLS-SEASVESNED 374
Query: 139 INDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSNSDPFKYNNSTGISYETLGP 198
+D+ + K+AK KNP+S ++ + G L+ S P + Y GP
Sbjct: 375 -SDHACKSSARKQAKSYMKTKNPDSQWPPRAATDREGFLAESSP----QTQRAPYS--GP 427
Query: 199 EELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRIYFLGPSAVLPEVESSLDND 258
++L +LL Q G C + L Q +EQ +RI+ + L E+ +L
Sbjct: 428 QDLAALL-EQIG---------CLKYL---QVFEEQDVDLRIFLTLTESDLKEIGITLFGP 474
Query: 259 SFDMTDSQA 267
MT + A
Sbjct: 475 KRKMTSAIA 483
>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
Length = 352
Score = 36.2 bits (82), Expect = 0.045
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 6/131 (4%)
Query: 80 KSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIANSNNMNKSESDQEDNDDI 139
KS++ NCS S + R A G S + A RR +S++ + S S +
Sbjct: 150 KSRKDTSRNCSASTSQGRKA---STAPGAEERSKQKARRRTRSSSSSSSSSSSSSSSSSS 206
Query: 140 NDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSNSDPFKYNNSTGIS--YETLG 197
+ + S KK K K DK ++ K LK K E + + + + + + G
Sbjct: 207 SSSSSSSDGRKKRGKYK-DKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQWHRSAG 265
Query: 198 PEELRSLLTTQ 208
EE +LT +
Sbjct: 266 EEEDGPVLTDE 276
>gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]
Length = 1958
Score = 35.8 bits (81), Expect = 0.058
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 243 GPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSDLSPSDSGSSKTSENQG-WGLGTN 301
G L V+ DS + + L++ + G S SDS +S +++++G WG G
Sbjct: 1343 GAEEPLTTVQEESTVDSQPVPNIDHLLTNIGRTGVSPGDVSDSATSDSTKSKGSWGSG-- 1400
Query: 302 SSESRKTKKKKSHLSLVGTASGLGSNKKKKPKPPAPPTPS 341
K + S LV + S K+KKPK A P+ S
Sbjct: 1401 -------KDQYSRELLVSSIFAAASRKRKKPKEKAQPSSS 1433
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 35.4 bits (80), Expect = 0.076
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 103 EKCLGMGRNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPN 162
EK L +SS+ R+ +S S +D + + S EKK KR+ K
Sbjct: 78 EKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNR 137
Query: 163 SPRRSKSLKHKNGELSNSDPFKYNNSTGISYETLGPEELRSL 204
S + S+S H++ S K S ET +++RSL
Sbjct: 138 SYKSSQSSTHESESESKESVKKKKKSKD---ETEKEKDVRSL 176
>gi|41055989 M-phase phosphoprotein 8 [Homo sapiens]
Length = 860
Score = 34.7 bits (78), Expect = 0.13
Identities = 54/229 (23%), Positives = 89/229 (38%), Gaps = 28/229 (12%)
Query: 118 RRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGEL 177
+R++ +N++ ++ SD + + + D S +KK +++ +K+P+ ++ K+ K +
Sbjct: 123 QRLSLNNDIFEANSDSDQQSETKE-DTSPKKKKKKLRQREEKSPDDLKKKKAKAGKLKDK 181
Query: 178 SNSDPFKYNNSTGISYETL-----GPEELRSLLTTQCGVISE-----HTKKMCTRSLRCP 227
S D S T EEL+ + + E KK R L+
Sbjct: 182 SKPDLESSLESLVFDLRTKKRISEAKEELKESKKPKKDEVKETKELKKVKKGEIRDLKTK 241
Query: 228 QHTD--EQRRTVRIYFLGPSAVLPEVESSLDNDS-FDMTDSQALISRLQWDGSSDLSPSD 284
D E R+T + F+ E ESS+ NDS F DS+ L SD
Sbjct: 242 TREDPKENRKTKKEKFVESQV---ESESSVLNDSPFPEDDSEGL--------HSDSREEK 290
Query: 285 SGSSKTSENQGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNKKKKPK 333
+ E G +G E K S +S G KKK P+
Sbjct: 291 QNTKSARERAGQDMGL---EHGFEKPLDSAMSAEEDTDVRGRRKKKTPR 336
>gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens]
Length = 2540
Score = 34.7 bits (78), Expect = 0.13
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 113 SRIANRRIANSNNMNKSESDQEDNDDIN------DN--DWSYGSEKKAKKRKSDKNPNSP 164
SR N + N + MNK +ED +N DN D+S S+ + ++ N +
Sbjct: 336 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 395
Query: 165 RRSKSLKHKNGELSNSDPFKYNNSTGISYETL 196
+ LK+KN N + K +N+ ETL
Sbjct: 396 KPENELKNKNTSKINGEEGKPHNNEKAGEETL 427
>gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens]
Length = 2303
Score = 34.7 bits (78), Expect = 0.13
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 113 SRIANRRIANSNNMNKSESDQEDNDDIN------DN--DWSYGSEKKAKKRKSDKNPNSP 164
SR N + N + MNK +ED +N DN D+S S+ + ++ N +
Sbjct: 117 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 176
Query: 165 RRSKSLKHKNGELSNSDPFKYNNSTGISYETL 196
+ LK+KN N + K +N+ ETL
Sbjct: 177 KPENELKNKNTSKINGEEGKPHNNEKAGEETL 208
>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
Length = 977
Score = 34.7 bits (78), Expect = 0.13
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 247 VLPEVESSLDNDSFDMTDSQALISRLQWDGSS-DLSPSDSGSSKTSENQGWGLGTNSSE 304
V P ES LD ++F +D+++L ++ WD D+ + +GS + SE QG GLG SE
Sbjct: 327 VPPTSESELDEEAF--SDARSLTNQSDWDSPYLDMELARAGS-RASEGQGSGLGGQLSE 382
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 34.7 bits (78), Expect = 0.13
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 110 RNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYG---SEKKAKKRKSDKNPNSPRR 166
R+SSR ++RR + S + +S S + D S SE+K + R D+ + R
Sbjct: 298 RHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRD 357
Query: 167 SKSLKHKN 174
KS KH++
Sbjct: 358 RKSYKHRS 365
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 34.7 bits (78), Expect = 0.13
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 110 RNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYG---SEKKAKKRKSDKNPNSPRR 166
R+SSR ++RR + S + +S S + D S SE+K + R D+ + R
Sbjct: 298 RHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRD 357
Query: 167 SKSLKHKN 174
KS KH++
Sbjct: 358 RKSYKHRS 365
>gi|50301232 synaptopodin 2-like isoform b [Homo sapiens]
Length = 753
Score = 34.7 bits (78), Expect = 0.13
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 247 VLPEVESSLDNDSFDMTDSQALISRLQWDGSS-DLSPSDSGSSKTSENQGWGLGTNSSE 304
V P ES LD ++F +D+++L ++ WD D+ + +GS + SE QG GLG SE
Sbjct: 103 VPPTSESELDEEAF--SDARSLTNQSDWDSPYLDMELARAGS-RASEGQGSGLGGQLSE 158
>gi|42718015 retinoblastoma binding protein 8 isoform a [Homo
sapiens]
Length = 897
Score = 33.9 bits (76), Expect = 0.22
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 138 DINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKN----GELSNSDPFKYNNSTGISY 193
D+ D GS+ K D + + LK K GE S+++ K N+S +
Sbjct: 669 DVTVIDTKDGSQSKLGGETVDMDCTLVSETVLLKMKKQEQKGEKSSNEERKMNDSLEDMF 728
Query: 194 ETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRIYFLGPSAVLPEVES 253
+ EE S L ++ +++ T + + H D+Q + + F+ P E E+
Sbjct: 729 DRTTHEEYESCLADSFSQAADEEEELSTATKKLHTHGDKQDKVKQKAFVEPYFKGDERET 788
Query: 254 SLDN 257
SL N
Sbjct: 789 SLQN 792
>gi|4506441 retinoblastoma binding protein 8 isoform a [Homo
sapiens]
Length = 897
Score = 33.9 bits (76), Expect = 0.22
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 138 DINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKN----GELSNSDPFKYNNSTGISY 193
D+ D GS+ K D + + LK K GE S+++ K N+S +
Sbjct: 669 DVTVIDTKDGSQSKLGGETVDMDCTLVSETVLLKMKKQEQKGEKSSNEERKMNDSLEDMF 728
Query: 194 ETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRIYFLGPSAVLPEVES 253
+ EE S L ++ +++ T + + H D+Q + + F+ P E E+
Sbjct: 729 DRTTHEEYESCLADSFSQAADEEEELSTATKKLHTHGDKQDKVKQKAFVEPYFKGDERET 788
Query: 254 SLDN 257
SL N
Sbjct: 789 SLQN 792
>gi|110431370 espin [Homo sapiens]
Length = 854
Score = 33.5 bits (75), Expect = 0.29
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 10/122 (8%)
Query: 220 CTRSLRCPQHTDEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDGSSD 279
CTR LR ++ + R + PSA E+E+ + ++ + L +D SS
Sbjct: 320 CTRYLRTVENLSVEHRVLS---RDPSA---ELEAKQPDSGMSSPNTTVSVQPLNFDLSSP 373
Query: 280 ---LSPSDSGSSKTSENQGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNKKKKPKPPA 336
LS DS SS S +G S +R + S++ ++ GL KP PP
Sbjct: 374 TSTLSNYDSCSSSHSSIKGQHPPCGLSSARAADIQ-SYMDMLNPELGLPRGTIGKPTPPP 432
Query: 337 PP 338
PP
Sbjct: 433 PP 434
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,400,254
Number of Sequences: 37866
Number of extensions: 667464
Number of successful extensions: 4466
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 3908
Number of HSP's gapped (non-prelim): 496
length of query: 347
length of database: 18,247,518
effective HSP length: 103
effective length of query: 244
effective length of database: 14,347,320
effective search space: 3500746080
effective search space used: 3500746080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.