| Name: LOC552889 | Sequence: fasta or formatted (97aa) | NCBI GI: 210147443 | |
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Description: hypothetical protein LOC552889
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.2 6 1 C cysteine 5.2 5 1 D aspartate 6.2 6 1 E glutamate 11.3 11 2 F phenylalanine 6.2 6 1 G glycine 8.2 8 1 H histidine 1.0 1 1 I isoleucine 5.2 5 1 K lysine 4.1 4 1 L leucine 10.3 10 1 M methionine 1.0 1 1 N asparagine 3.1 3 1 P proline 7.2 7 2 Q glutamine 6.2 6 2 R arginine 3.1 3 1 S serine 5.2 5 1 T threonine 2.1 2 1 V valine 5.2 5 1 W tryptophan 0.0 0 0 Y tyrosine 3.1 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC552889 ATXN7L3 0.413 ataxin 7-like 3 isoform b ATXN7L3 0.413 ataxin 7-like 3 isoform a LOC390748 0.017 similar to poly(A)binding protein nuclear-like 1 [H... CDKN1B 0.017 cyclin-dependent kinase inhibitor 1B CAMK1 0.011 calcium/calmodulin-dependent protein kinase I LRRTM4 0.011 leucine rich repeat transmembrane neuronal 4 isofor... LRRTM4 0.011 leucine rich repeat transmembrane neuronal 4 isofor... DHX16 0.011 DEAH (Asp-Glu-Ala-His) box polypeptide 16 TRPM5 0.011 transient receptor potential cation channel, subfami... ESRP1 0.011 RNA binding motif protein 35A isoform 5 ESRP1 0.011 RNA binding motif protein 35A isoform 3 ESRP1 0.011 RNA binding motif protein 35A isoform 4 ESRP1 0.011 RNA binding motif protein 35A isoform 2 ESRP1 0.011 RNA binding motif protein 35A isoform 1 KCNN1 0.006 potassium intermediate/small conductance calcium-act... IRAK4 0.006 interleukin-1 receptor-associated kinase 4 isoform ... IRAK4 0.006 interleukin-1 receptor-associated kinase 4 isoform ... IRAK4 0.006 interleukin-1 receptor-associated kinase 4 isoform ... IRAK4 0.006 interleukin-1 receptor-associated kinase 4 isoform ... IRAK4 0.006 interleukin-1 receptor-associated kinase 4 isoform ... LOC100288367 0.006 PREDICTED: hypothetical protein XP_002343418 isofor... LOC100288367 0.006 PREDICTED: hypothetical protein XP_002343419 isofor... ADAMTS14 0.006 ADAM metallopeptidase with thrombospondin type 1 mot... ADAMTS14 0.006 ADAM metallopeptidase with thrombospondin type 1 mo... CNOT4 0.006 CCR4-NOT transcription complex, subunit 4 isoform a ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
