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Search of human proteins with 149408130
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149408130 ret finger protein-like 1 [Homo sapiens]
(317 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149408130 ret finger protein-like 1 [Homo sapiens] 658 0.0
gi|149408135 ret finger protein-like 3 isoform 1 [Homo sapiens] 598 e-171
gi|148728184 ret finger protein-like 2 isoform 1 [Homo sapiens] 587 e-168
gi|5730013 ret finger protein-like 3 isoform 2 [Homo sapiens] 542 e-154
gi|227116303 ret finger protein-like 2 isoform 2 [Homo sapiens] 537 e-153
gi|227116308 ret finger protein-like 2 isoform 3 [Homo sapiens] 533 e-152
gi|227116306 ret finger protein-like 2 isoform 3 [Homo sapiens] 533 e-152
gi|222446629 ret finger protein-like 4A [Homo sapiens] 345 4e-95
gi|153791360 ret finger protein-like 4B [Homo sapiens] 153 2e-37
gi|4557743 Mediterranean fever protein [Homo sapiens] 150 1e-36
gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo ... 150 1e-36
gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo... 150 1e-36
gi|5730009 ret finger protein [Homo sapiens] 149 2e-36
gi|222418658 butyrophilin, subfamily 3, member A1 isoform c [Hom... 145 4e-35
gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo... 145 4e-35
gi|15208660 tripartite motif protein 21 [Homo sapiens] 142 5e-34
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens] 136 3e-32
gi|31542779 tripartite motif family-like 1 [Homo sapiens] 135 6e-32
gi|21630277 tripartite motif-containing 11 [Homo sapiens] 134 1e-31
gi|31881693 butyrophilin, subfamily 2, member A2 isoform b [Homo... 133 2e-31
gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo ... 133 2e-31
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 133 2e-31
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 133 2e-31
gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precur... 131 7e-31
gi|5454014 tripartite motif-containing 38 [Homo sapiens] 124 8e-29
gi|37622899 ring finger protein 137 [Homo sapiens] 124 1e-28
gi|63054855 erythroblast membrane-associated protein precursor [... 123 2e-28
gi|19923536 erythroblast membrane-associated protein precursor [... 123 2e-28
gi|37595541 tripartite motif-containing 69 isoform b [Homo sapiens] 122 4e-28
gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens] 122 4e-28
>gi|149408130 ret finger protein-like 1 [Homo sapiens]
Length = 317
Score = 658 bits (1698), Expect = 0.0
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 60
MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC
Sbjct: 1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 60
Query: 61 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM 120
FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM
Sbjct: 61 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM 120
Query: 121 RKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH 180
RKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH
Sbjct: 121 RKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH 180
Query: 181 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR 240
YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR
Sbjct: 181 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR 240
Query: 241 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICP 300
KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICP
Sbjct: 241 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICP 300
Query: 301 VINPGTTDAPVHPGEAK 317
VINPGTTDAPVHPGEAK
Sbjct: 301 VINPGTTDAPVHPGEAK 317
>gi|149408135 ret finger protein-like 3 isoform 1 [Homo sapiens]
Length = 317
Score = 598 bits (1542), Expect = e-171
Identities = 291/317 (91%), Positives = 298/317 (94%)
Query: 1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 60
MKRLSLVTTNRLSP GNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGC VC
Sbjct: 1 MKRLSLVTTNRLSPQGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCTVC 60
Query: 61 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM 120
KCINSLQKEPHGEDLLCCCCSMVSQ+NKIRP+ QLERL SHIKELEPKLKKILQMNPRM
Sbjct: 61 LKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNRQLERLVSHIKELEPKLKKILQMNPRM 120
Query: 121 RKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH 180
RKFQVDMTLDADTANNFLLISDDLRSVRSG ITQNRQDLAERFDVS+CILGSPRFTCGRH
Sbjct: 121 RKFQVDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRH 180
Query: 181 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR 240
YWEVDVGTSTEWDLGVCRESVH KG+I LTTE GFWTVSLRDGSRLSASTVPLTFL VDR
Sbjct: 181 YWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDR 240
Query: 241 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICP 300
KLQRVGIFLDMGMQNVSFFDAE GSHVYTFRSVSAEEPL F AP PPNGD+ VLSICP
Sbjct: 241 KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGDQGVLSICP 300
Query: 301 VINPGTTDAPVHPGEAK 317
++N GTTDAPV PGEAK
Sbjct: 301 LMNSGTTDAPVRPGEAK 317
>gi|148728184 ret finger protein-like 2 isoform 1 [Homo sapiens]
Length = 317
Score = 587 bits (1514), Expect = e-168
Identities = 288/317 (90%), Positives = 296/317 (93%)
Query: 1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 60
MKRLSLVTTNRLSPHGNF LCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC
Sbjct: 1 MKRLSLVTTNRLSPHGNFFTLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 60
Query: 61 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM 120
KCINSLQKEPHGEDLLCCC SMVS+KNKIR + QLERLASHIKELEPKLKKILQMNPRM
Sbjct: 61 LKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRM 120
Query: 121 RKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH 180
RKFQVDMTLDA+TANNFLLISDDLRSVRSG I QNRQDLAERFDVS+CILGSPRFTCGRH
Sbjct: 121 RKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRH 180
Query: 181 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR 240
WEVDVGTSTEWDLGVCRESVHRKGRI LTTE GFWTVSLRDG RLSA+TVPLTFLFVDR
Sbjct: 181 CWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDR 240
Query: 241 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICP 300
KLQRVGIFLDMGMQNVSFFDAE GSHVYTFRSVSAEEPL F AP PPNGD+ VLSICP
Sbjct: 241 KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICP 300
Query: 301 VINPGTTDAPVHPGEAK 317
++N GTTDAPV PGEAK
Sbjct: 301 LMNSGTTDAPVRPGEAK 317
>gi|5730013 ret finger protein-like 3 isoform 2 [Homo sapiens]
Length = 288
Score = 542 bits (1397), Expect = e-154
Identities = 263/288 (91%), Positives = 270/288 (93%)
Query: 30 MAALFQEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKNK 89
MAALFQEASSCPVCSDYLEKPMSLECGC VC KCINSLQKEPHGEDLLCCCCSMVSQ+NK
Sbjct: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
Query: 90 IRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 149
IRP+ QLERL SHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS
Sbjct: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
Query: 150 GCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHL 209
G ITQNRQDLAERFDVS+CILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVH KG+I L
Sbjct: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
Query: 210 TTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYT 269
TTE GFWTVSLRDGSRLSASTVPLTFL VDRKLQRVGIFLDMGMQNVSFFDAE GSHVYT
Sbjct: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
Query: 270 FRSVSAEEPLHLFFAPPSPPNGDKSVLSICPVINPGTTDAPVHPGEAK 317
FRSVSAEEPL F AP PPNGD+ VLSICP++N GTTDAPV PGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
>gi|227116303 ret finger protein-like 2 isoform 2 [Homo sapiens]
Length = 378
Score = 537 bits (1383), Expect = e-153
Identities = 263/290 (90%), Positives = 271/290 (93%)
Query: 28 VDMAALFQEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQK 87
VDMAALFQEASSCPVCSDYLEKPMSLECGCAVC KCINSLQKEPHGEDLLCCC SMVS+K
Sbjct: 89 VDMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRK 148
Query: 88 NKIRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSV 147
NKIR + QLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDA+TANNFLLISDDLRSV
Sbjct: 149 NKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSV 208
Query: 148 RSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRI 207
RSG I QNRQDLAERFDVS+CILGSPRFTCGRH WEVDVGTSTEWDLGVCRESVHRKGRI
Sbjct: 209 RSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRI 268
Query: 208 HLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHV 267
LTTE GFWTVSLRDG RLSA+TVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAE GSHV
Sbjct: 269 QLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHV 328
Query: 268 YTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICPVINPGTTDAPVHPGEAK 317
YTFRSVSAEEPL F AP PPNGD+ VLSICP++N GTTDAPV PGEAK
Sbjct: 329 YTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 378
>gi|227116308 ret finger protein-like 2 isoform 3 [Homo sapiens]
Length = 288
Score = 533 bits (1373), Expect = e-152
Identities = 261/288 (90%), Positives = 269/288 (93%)
Query: 30 MAALFQEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKNK 89
MAALFQEASSCPVCSDYLEKPMSLECGCAVC KCINSLQKEPHGEDLLCCC SMVS+KNK
Sbjct: 1 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 60
Query: 90 IRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 149
IR + QLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDA+TANNFLLISDDLRSVRS
Sbjct: 61 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 120
Query: 150 GCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHL 209
G I QNRQDLAERFDVS+CILGSPRFTCGRH WEVDVGTSTEWDLGVCRESVHRKGRI L
Sbjct: 121 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 180
Query: 210 TTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYT 269
TTE GFWTVSLRDG RLSA+TVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAE GSHVYT
Sbjct: 181 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
Query: 270 FRSVSAEEPLHLFFAPPSPPNGDKSVLSICPVINPGTTDAPVHPGEAK 317
FRSVSAEEPL F AP PPNGD+ VLSICP++N GTTDAPV PGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
>gi|227116306 ret finger protein-like 2 isoform 3 [Homo sapiens]
Length = 288
Score = 533 bits (1373), Expect = e-152
Identities = 261/288 (90%), Positives = 269/288 (93%)
Query: 30 MAALFQEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKNK 89
MAALFQEASSCPVCSDYLEKPMSLECGCAVC KCINSLQKEPHGEDLLCCC SMVS+KNK
Sbjct: 1 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 60
Query: 90 IRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 149
IR + QLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDA+TANNFLLISDDLRSVRS
Sbjct: 61 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 120
Query: 150 GCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHL 209
G I QNRQDLAERFDVS+CILGSPRFTCGRH WEVDVGTSTEWDLGVCRESVHRKGRI L
Sbjct: 121 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 180
Query: 210 TTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYT 269
TTE GFWTVSLRDG RLSA+TVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAE GSHVYT
Sbjct: 181 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
Query: 270 FRSVSAEEPLHLFFAPPSPPNGDKSVLSICPVINPGTTDAPVHPGEAK 317
FRSVSAEEPL F AP PPNGD+ VLSICP++N GTTDAPV PGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
>gi|222446629 ret finger protein-like 4A [Homo sapiens]
Length = 287
Score = 345 bits (884), Expect = 4e-95
Identities = 165/282 (58%), Positives = 212/282 (75%)
Query: 30 MAALFQEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKNK 89
MA F++ CPVC LE+ + L+CG A C +C+NSLQKEP GE LLC CS+VSQK+
Sbjct: 1 MAEHFKQIIRCPVCLKDLEEAVQLKCGYACCLQCLNSLQKEPDGEGLLCRFCSVVSQKDD 60
Query: 90 IRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 149
I+P ++L L S IKELEPKLK +L MNPRMRKFQVDMT D DTANN+L+IS+DLRS RS
Sbjct: 61 IKPKYKLRALVSIIKELEPKLKSVLTMNPRMRKFQVDMTFDVDTANNYLIISEDLRSFRS 120
Query: 150 GCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHL 209
G ++QNR++ AERFD ++C+LG+PRFT GRHYWEVDVGTS WD+GVC+ESV+R+G+I L
Sbjct: 121 GDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVGTSQVWDVGVCKESVNRQGKIVL 180
Query: 210 TTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYT 269
++E GF TV R+G +ASTVP+T L+V +L RVGIFLD+GM++++F++ G H+YT
Sbjct: 181 SSEHGFLTVGCREGKVFAASTVPMTPLWVSPQLHRVGIFLDVGMRSIAFYNVSDGCHIYT 240
Query: 270 FRSVSAEEPLHLFFAPPSPPNGDKSVLSICPVINPGTTDAPV 311
F + EP FFA D+S+LSIC VINP APV
Sbjct: 241 FIEIPVCEPWRPFFAHKRGSQDDQSILSICSVINPSAASAPV 282
>gi|153791360 ret finger protein-like 4B [Homo sapiens]
Length = 263
Score = 153 bits (387), Expect = 2e-37
Identities = 99/272 (36%), Positives = 145/272 (53%), Gaps = 10/272 (3%)
Query: 30 MAALFQEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKNK 89
MA Q SCPVC D+ +SL C CF CI E H +C C V +
Sbjct: 1 MAKRLQAELSCPVCLDFFSCSISLSCTHVFCFDCIQRYILENHDFRAMCPLCRDVVKVPA 60
Query: 90 IRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 149
+ WQ+ L K+ +L++ L + +R F+ D+TLDA TA++ L+ S+DLRS +
Sbjct: 61 LE-EWQVSVLTLMTKQHNSRLEQSLHVREELRHFREDVTLDAATASSLLVFSNDLRSAQC 119
Query: 150 GCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHL 209
I DL + ++ C+LG+P F+ G+HYWEV+VG W LGVC+E RK L
Sbjct: 120 KKI---HHDLTKDPRLA-CVLGTPCFSSGQHYWEVEVGEVKSWSLGVCKEPADRKSN-DL 174
Query: 210 TTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYT 269
E GFW +S++ G+ + A+T L + +L+RVGIFLD ++ + FFD + +YT
Sbjct: 175 FPEHGFW-ISMKAGA-IHANT-HLERIPASPRLRRVGIFLDADLEEIQFFDVDNNVLIYT 231
Query: 270 FRSVSAEEPLHLFFAPPSPPNGDK-SVLSICP 300
+ E L FF G+ +VL+ICP
Sbjct: 232 HDGFFSLELLCPFFCLELLGEGESGNVLTICP 263
>gi|4557743 Mediterranean fever protein [Homo sapiens]
Length = 781
Score = 150 bits (379), Expect = 1e-36
Identities = 79/182 (43%), Positives = 109/182 (59%), Gaps = 1/182 (0%)
Query: 125 VDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEV 184
V++ LDA+TA L+ SDDL+SVR G + D +RFD I +LGSP F GR YWEV
Sbjct: 598 VNVILDAETAYPNLIFSDDLKSVRLGNKWERLPDGPQRFDSCIIVLGSPSFLSGRRYWEV 657
Query: 185 DVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQR 244
+VG T W LG C+ S+ RKG + L+ E G+W V + + AS+VP T L + +R
Sbjct: 658 EVGDKTAWILGACKTSISRKGNMTLSPENGYWVVIMMKENEYQASSVPPTRLLIKEPPKR 717
Query: 245 VGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSV-LSICPVIN 303
VGIF+D + ++SF++ SH+YTF S S PL F+P + G + L+ICPV
Sbjct: 718 VGIFVDYRVGSISFYNVTARSHIYTFASCSFSGPLQPIFSPGTRDGGKNTAPLTICPVGG 777
Query: 304 PG 305
G
Sbjct: 778 QG 779
>gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo
sapiens]
Length = 584
Score = 150 bits (379), Expect = 1e-36
Identities = 93/244 (38%), Positives = 129/244 (52%), Gaps = 31/244 (12%)
Query: 86 QKNKIRPSWQLER------LASHIKELEPKLKKILQMNPRMRKFQ--------------- 124
QK KI S + ER + E E L++ LQ + RK Q
Sbjct: 274 QKEKIALSRETEREREMKEMGYAATEQEISLREKLQEELKWRKIQYMARGEKSLAYHEWK 333
Query: 125 ------VDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCG 178
D+ LD DTAN LL+S+D RSV+ ++ D ERF+ C+LG FT G
Sbjct: 334 MALFKPADVILDPDTANAILLVSEDQRSVQRAEEPRDLPDNPERFEWRYCVLGCENFTSG 393
Query: 179 RHYWEVDVGTSTEWDLGVCRESVHR-KGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLF 237
RHYWEV+VG EW +GVC ++V R KG + +T E G+WT+ L DG++ A T P T L
Sbjct: 394 RHYWEVEVGDRKEWHIGVCSKNVERKKGWVKMTPENGYWTMGLTDGNKYRALTEPRTNLK 453
Query: 238 VDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLS 297
+ ++VGIFLD +SF++A GSH+YTF S EPL+ F + + + L+
Sbjct: 454 LPEPPRKVGIFLDYETGEISFYNATDGSHIYTFPHASFSEPLYPVFRILTL---EPTALT 510
Query: 298 ICPV 301
ICP+
Sbjct: 511 ICPI 514
>gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo
sapiens]
Length = 542
Score = 150 bits (379), Expect = 1e-36
Identities = 93/244 (38%), Positives = 129/244 (52%), Gaps = 31/244 (12%)
Query: 86 QKNKIRPSWQLER------LASHIKELEPKLKKILQMNPRMRKFQ--------------- 124
QK KI S + ER + E E L++ LQ + RK Q
Sbjct: 232 QKEKIALSRETEREREMKEMGYAATEQEISLREKLQEELKWRKIQYMARGEKSLAYHEWK 291
Query: 125 ------VDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCG 178
D+ LD DTAN LL+S+D RSV+ ++ D ERF+ C+LG FT G
Sbjct: 292 MALFKPADVILDPDTANAILLVSEDQRSVQRAEEPRDLPDNPERFEWRYCVLGCENFTSG 351
Query: 179 RHYWEVDVGTSTEWDLGVCRESVHR-KGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLF 237
RHYWEV+VG EW +GVC ++V R KG + +T E G+WT+ L DG++ A T P T L
Sbjct: 352 RHYWEVEVGDRKEWHIGVCSKNVERKKGWVKMTPENGYWTMGLTDGNKYRALTEPRTNLK 411
Query: 238 VDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLS 297
+ ++VGIFLD +SF++A GSH+YTF S EPL+ F + + + L+
Sbjct: 412 LPEPPRKVGIFLDYETGEISFYNATDGSHIYTFPHASFSEPLYPVFRILTL---EPTALT 468
Query: 298 ICPV 301
ICP+
Sbjct: 469 ICPI 472
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 149 bits (377), Expect = 2e-36
Identities = 81/205 (39%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
Query: 97 ERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNR 156
E L ++++ ++KI ++ + + VD+TLD DTA L++SD+LR VR + Q+
Sbjct: 289 ESLKQFTEKMQSDMEKIQELR-EAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDL 347
Query: 157 QDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFW 216
D ERF++ C+LGSP F GRHYWEV+VG +W +GVC +SV RKG + + GFW
Sbjct: 348 PDNPERFNLFPCVLGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFW 407
Query: 217 TVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAE 276
VSL G A T P+T L + LQRVGIFLD VSF++ H +TF +
Sbjct: 408 AVSLWYGKEYWALTSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFC 467
Query: 277 EPLHLFFAPPSPPNGDKSVLSICPV 301
P+ +F+ + L ICP+
Sbjct: 468 GPVRPYFSLSYSGGKSAAPLIICPM 492
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 30 MAALFQEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKNK 89
+A Q+ ++CPVC Y +PM L+CG +C C+ ++ C C +
Sbjct: 6 VAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAE-TNVSCPQCRETFPQRH 64
Query: 90 IRPSWQLERLASHIKEL 106
+RP+ L + +K+L
Sbjct: 65 MRPNRHLANVTQLVKQL 81
>gi|222418658 butyrophilin, subfamily 3, member A1 isoform c [Homo
sapiens]
Length = 461
Score = 145 bits (367), Expect = 4e-35
Identities = 75/175 (42%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Query: 126 DMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVD 185
D+ LD TAN LL+S+D RSV+ Q+ D ERF+ C+LG F GRHYWEV+
Sbjct: 289 DVILDPKTANPILLVSEDQRSVQRAKEPQDLPDNPERFNWHYCVLGCESFISGRHYWEVE 348
Query: 186 VGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRV 245
VG EW +GVC ++V RKG + +T E GFWT+ L DG++ T P T L + + ++V
Sbjct: 349 VGDRKEWHIGVCSKNVQRKGWVKMTPENGFWTMGLTDGNKYRTLTEPRTNLKLPKPPKKV 408
Query: 246 GIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICP 300
G+FLD ++SF++A GSH++TF VS E L+ F + + + L+ICP
Sbjct: 409 GVFLDYETGDISFYNAVDGSHIHTFLDVSFSEALYPVFRILTL---EPTALTICP 460
>gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo
sapiens]
Length = 513
Score = 145 bits (367), Expect = 4e-35
Identities = 75/175 (42%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Query: 126 DMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVD 185
D+ LD TAN LL+S+D RSV+ Q+ D ERF+ C+LG F GRHYWEV+
Sbjct: 341 DVILDPKTANPILLVSEDQRSVQRAKEPQDLPDNPERFNWHYCVLGCESFISGRHYWEVE 400
Query: 186 VGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRV 245
VG EW +GVC ++V RKG + +T E GFWT+ L DG++ T P T L + + ++V
Sbjct: 401 VGDRKEWHIGVCSKNVQRKGWVKMTPENGFWTMGLTDGNKYRTLTEPRTNLKLPKPPKKV 460
Query: 246 GIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICP 300
G+FLD ++SF++A GSH++TF VS E L+ F + + + L+ICP
Sbjct: 461 GVFLDYETGDISFYNAVDGSHIHTFLDVSFSEALYPVFRILTL---EPTALTICP 512
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 142 bits (357), Expect = 5e-34
Identities = 91/225 (40%), Positives = 124/225 (55%), Gaps = 15/225 (6%)
Query: 93 SWQLERLASHIKELE-----PKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSV 147
SW L+ L EL P LKK+L R V +TLD DTAN +L++S+D R V
Sbjct: 256 SWNLKDLDITSPELRSVCHVPGLKKML------RTCAVHITLDPDTANPWLILSEDRRQV 309
Query: 148 RSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRI 207
R G Q+ ERFD +LG+ F G+HYWEVDV WDLGVCR+SV RKG
Sbjct: 310 RLGDTQQSIPGNEERFDSYPMVLGAQHFHSGKHYWEVDVTGKEAWDLGVCRDSVRRKGHF 369
Query: 208 HLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFD-AEGGSH 266
L+++ GFWT+ L + + A T P T L + +VGIFLD VSF++ + GS
Sbjct: 370 LLSSKSGFWTIWLWNKQKYEAGTYPQTPLHLQVPPCQVGIFLDYEAGMVSFYNITDHGSL 429
Query: 267 VYTFRSVSAEEPLHLFFAPPSPPNGDKSV-LSICP--VINPGTTD 308
+Y+F + PL FF+P G + L++CP + + G+TD
Sbjct: 430 IYSFSECAFTGPLRPFFSPGFNDGGKNTAPLTLCPLNIGSQGSTD 474
Score = 50.4 bits (119), Expect = 2e-06
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 36 EASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQ 95
E +CP+C D +P+S+ECG + C +CI+ + K G +C C +RP+ Q
Sbjct: 12 EEVTCPICLDPFVEPVSIECGHSFCQECISQVGK---GGGSVCPVCRQRFLLKNLRPNRQ 68
Query: 96 LERLASHIKELEPKLKK 112
L + +++KE+ + ++
Sbjct: 69 LANMVNNLKEISQEARE 85
>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
Length = 526
Score = 136 bits (342), Expect = 3e-32
Identities = 79/177 (44%), Positives = 104/177 (58%), Gaps = 4/177 (2%)
Query: 125 VDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEV 184
VD+TLD DTA+ L + +D +SVR Q + ERFD C+LG FT GRHYWEV
Sbjct: 303 VDVTLDPDTAHPHLFLYEDSKSVRLEDSRQKLPEKTERFDSWPCVLGRETFTSGRHYWEV 362
Query: 185 DVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQR 244
+VG T+W +GVCRE+V +KG +T E GFW V L G+ A T T L + +R
Sbjct: 363 EVGDRTDWAIGVCRENVMKKGFDPMTPENGFWAVELY-GNGYWALTPLRTPLPLAGPPRR 421
Query: 245 VGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICPV 301
VGIFLD ++SF++ GS +YTF +V+ PL FF S K L+ICP+
Sbjct: 422 VGIFLDYESGDISFYNMNDGSDIYTFSNVTFSGPLRPFFCLWS---SGKKPLTICPI 475
>gi|31542779 tripartite motif family-like 1 [Homo sapiens]
Length = 468
Score = 135 bits (339), Expect = 6e-32
Identities = 76/195 (38%), Positives = 112/195 (57%), Gaps = 2/195 (1%)
Query: 107 EPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVS 166
E L +I M +RKF ++TLD TAN +L++S+DL+SV+ G Q D ERFD S
Sbjct: 268 ELSLCRITGMKEMLRKFSTEITLDPATANAYLVLSEDLKSVKYGGSRQQLPDNPERFDQS 327
Query: 167 ICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRL 226
+LG+ FT GRHYWEV+VG TEW++G+C++SV RKG + F + L+ G
Sbjct: 328 ATVLGTQIFTSGRHYWEVEVGNKTEWEVGICKDSVSRKGNLPKPPGDLFSLIGLKIGDDY 387
Query: 227 SA-STVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAP 285
S + PL V + +VG+FLD +++F++ S +Y+F S +E L F+P
Sbjct: 388 SLWVSSPLKGQHVREPVCKVGVFLDYESGHIAFYNGTDESLIYSFPQASFQEALRPIFSP 447
Query: 286 PSPPNG-DKSVLSIC 299
P G + L+IC
Sbjct: 448 CLPNEGTNTDPLTIC 462
Score = 42.0 bits (97), Expect = 7e-04
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 29 DMAALFQEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKN 88
D+ +E +C +C DY P++ ECG + C C+ +E H L C C +
Sbjct: 5 DLMENLREELTCFICLDYFSSPVTTECGHSFCLVCLLRSWEE-HNTPLSCPECWRTLEGP 63
Query: 89 KIRPSWQLERLASHIKELEPKL 110
+ + +L RLAS ++L ++
Sbjct: 64 HFQSNERLGRLASIARQLRSQV 85
>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
Length = 468
Score = 134 bits (336), Expect = 1e-31
Identities = 82/192 (42%), Positives = 111/192 (57%), Gaps = 7/192 (3%)
Query: 120 MRKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGR 179
+R+F+ D+TLD DTAN L++S+D RSV+ G + Q D ERFD C+LG RFT GR
Sbjct: 282 LRRFRGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGR 341
Query: 180 HYWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVD 239
HYWEV+VG T W LGVCRE+V+RK + L+ GFW + GS ++S L L
Sbjct: 342 HYWEVEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFL-GSYYNSSERALAPL--R 398
Query: 240 RKLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSIC 299
+RVGIFLD ++SF+ A GS ++ F + L F SP + + ++IC
Sbjct: 399 DPPRRVGIFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLF---SPLSSSPTPMTIC 455
Query: 300 -PVINPGTTDAP 310
P G T AP
Sbjct: 456 RPKGGSGDTLAP 467
Score = 52.4 bits (124), Expect = 5e-07
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 27 AVDMAALFQEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQ 86
A D++ QE ++C +C DY P+ +CG C +CI +P G C C +S
Sbjct: 3 APDLSTNLQEEATCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEG-PYACPECRELSP 61
Query: 87 KNKIRPSWQLERLASHIKELEP 108
+ +RP+ L ++A + L P
Sbjct: 62 QRNLRPNRPLAKMAEMARRLHP 83
>gi|31881693 butyrophilin, subfamily 2, member A2 isoform b [Homo
sapiens]
Length = 407
Score = 133 bits (335), Expect = 2e-31
Identities = 82/224 (36%), Positives = 118/224 (52%), Gaps = 8/224 (3%)
Query: 79 CCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFL 138
CC + ++ KI + ++ KE+ +L++ L+ R D+ LD DTA+ L
Sbjct: 168 CCIKKLQREKKILSGEK--KVEQEEKEIAQQLQEELRWR-RTFLHAADVVLDPDTAHPEL 224
Query: 139 LISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCR 198
+S+D RSVR G Q D ERFD C+LG F G+HYWEV+V W +GVCR
Sbjct: 225 FLSEDRRSVRRGPYRQRVPDNPERFDSQPCVLGWESFASGKHYWEVEVENVMVWTVGVCR 284
Query: 199 ESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSF 258
SV RKG + L + GFWT+ + G++ A + P L + L RVG+FLD +VSF
Sbjct: 285 HSVERKGEVLLIPQNGFWTLEM-FGNQYRALSSPERILPLKESLCRVGVFLDYEAGDVSF 343
Query: 259 FDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICPVI 302
++ SH+YT + P+ FF S D S + ICP +
Sbjct: 344 YNMRDRSHIYTCPRSAFTVPVRPFFRLGS----DDSPIFICPAL 383
>gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo
sapiens]
Length = 523
Score = 133 bits (335), Expect = 2e-31
Identities = 82/224 (36%), Positives = 118/224 (52%), Gaps = 8/224 (3%)
Query: 79 CCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFL 138
CC + ++ KI + ++ KE+ +L++ L+ R D+ LD DTA+ L
Sbjct: 284 CCIKKLQREKKILSGEK--KVEQEEKEIAQQLQEELRWR-RTFLHAADVVLDPDTAHPEL 340
Query: 139 LISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCR 198
+S+D RSVR G Q D ERFD C+LG F G+HYWEV+V W +GVCR
Sbjct: 341 FLSEDRRSVRRGPYRQRVPDNPERFDSQPCVLGWESFASGKHYWEVEVENVMVWTVGVCR 400
Query: 199 ESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSF 258
SV RKG + L + GFWT+ + G++ A + P L + L RVG+FLD +VSF
Sbjct: 401 HSVERKGEVLLIPQNGFWTLEM-FGNQYRALSSPERILPLKESLCRVGVFLDYEAGDVSF 459
Query: 259 FDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICPVI 302
++ SH+YT + P+ FF S D S + ICP +
Sbjct: 460 YNMRDRSHIYTCPRSAFTVPVRPFFRLGS----DDSPIFICPAL 499
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 133 bits (334), Expect = 2e-31
Identities = 78/206 (37%), Positives = 114/206 (55%), Gaps = 11/206 (5%)
Query: 81 CSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLI 140
C V S +LE+ S+ L+KIL ++ D+TLD +TA+ L++
Sbjct: 269 CEKVKTMEVTSVSIELEKNFSNFPRQYFALRKIL------KQLIADVTLDPETAHPNLVL 322
Query: 141 SDDLRSVRSGCITQNRQDLAE---RFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVC 197
S+D +SV+ + +DL + RF C+L + FT GRHYWEV+VG T W +GVC
Sbjct: 323 SEDRKSVKF--VETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVC 380
Query: 198 RESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVS 257
R+SV RKG + E G+W V L +G + +A+T P T L + K +RVGIFLD +S
Sbjct: 381 RDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLS 440
Query: 258 FFDAEGGSHVYTFRSVSAEEPLHLFF 283
F++ SH+YTF E+ LF+
Sbjct: 441 FYNVTDRSHIYTFTDTFTEKLWPLFY 466
Score = 49.7 bits (117), Expect = 3e-06
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 35 QEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSW 94
Q +SC VC +YL++P+ +ECG C CI ++ D C C S+ +RP+
Sbjct: 24 QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVCRKTSRYRSLRPNR 82
Query: 95 QLERLASHIKELEPKLKKI 113
QL + K+L+ +KI
Sbjct: 83 QLGSMVEIAKQLQAVKRKI 101
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 133 bits (334), Expect = 2e-31
Identities = 78/206 (37%), Positives = 114/206 (55%), Gaps = 11/206 (5%)
Query: 81 CSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLI 140
C V S +LE+ S+ L+KIL ++ D+TLD +TA+ L++
Sbjct: 299 CEKVKTMEVTSVSIELEKNFSNFPRQYFALRKIL------KQLIADVTLDPETAHPNLVL 352
Query: 141 SDDLRSVRSGCITQNRQDLAE---RFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVC 197
S+D +SV+ + +DL + RF C+L + FT GRHYWEV+VG T W +GVC
Sbjct: 353 SEDRKSVKF--VETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVC 410
Query: 198 RESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVS 257
R+SV RKG + E G+W V L +G + +A+T P T L + K +RVGIFLD +S
Sbjct: 411 RDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLS 470
Query: 258 FFDAEGGSHVYTFRSVSAEEPLHLFF 283
F++ SH+YTF E+ LF+
Sbjct: 471 FYNVTDRSHIYTFTDTFTEKLWPLFY 496
Score = 49.7 bits (117), Expect = 3e-06
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 35 QEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSW 94
Q +SC VC +YL++P+ +ECG C CI ++ D C C S+ +RP+
Sbjct: 24 QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVCRKTSRYRSLRPNR 82
Query: 95 QLERLASHIKELEPKLKKI 113
QL + K+L+ +KI
Sbjct: 83 QLGSMVEIAKQLQAVKRKI 101
>gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precursor
[Homo sapiens]
Length = 527
Score = 131 bits (330), Expect = 7e-31
Identities = 93/253 (36%), Positives = 132/253 (52%), Gaps = 20/253 (7%)
Query: 58 AVCFKCINSLQKEPHGEDLLCCCCSMVSQKNKIR-PSWQLERLASHIKELEPKLKKILQM 116
AVC IN LQKE + +L + +I + ER+ KE E ++K+ LQ
Sbjct: 263 AVCIYWINKLQKE---KKILSGEKEFERETREIALKELEKERVQ---KEEELQVKEKLQE 316
Query: 117 NPRMRK---FQVDMTLDADTANNFLLISDDLRSVRSGC----ITQNRQDLAERFDVSICI 169
R R+ VD+ LD DTA+ L +S+D RSVR C + ++ D ERFD C+
Sbjct: 317 ELRWRRTFLHAVDVVLDPDTAHPDLFLSEDRRSVRR-CPFRHLGESVPDNPERFDSQPCV 375
Query: 170 LGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSAS 229
LG F G+HYWEV+V EW +GVCR+SV RKG + L + GFWT+ + G + S
Sbjct: 376 LGRESFASGKHYWEVEVENVIEWTVGVCRDSVERKGEVLLIPQNGFWTLEMHKGQYRAVS 435
Query: 230 TVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPP 289
+ P L + L RVG+FLD +VSF++ SH+YT + P+ FF
Sbjct: 436 S-PDRILPLKESLCRVGVFLDYEAGDVSFYNMRDRSHIYTCPRSAFSVPVRPFFR----L 490
Query: 290 NGDKSVLSICPVI 302
+ S + ICP +
Sbjct: 491 GCEDSPIFICPAL 503
>gi|5454014 tripartite motif-containing 38 [Homo sapiens]
Length = 465
Score = 124 bits (312), Expect = 8e-29
Identities = 72/188 (38%), Positives = 97/188 (51%), Gaps = 6/188 (3%)
Query: 111 KKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICIL 170
K + +R QV +TLD DTA++ L++S+D R V G +N+ + RF C+L
Sbjct: 278 KLYFDVKKMLRSHQVSVTLDPDTAHHELILSEDRRQVTRGYTQENQDTSSRRFTAFPCVL 337
Query: 171 GSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSAST 230
G FT GR Y+EVDVG T WDLGVC E+V R + + GFWT+ L A T
Sbjct: 338 GCEGFTSGRRYFEVDVGEGTGWDLGVCMENVQRGTGMKQEPQSGFWTLRLCKKKGYVALT 397
Query: 231 VPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPS--- 287
P T L + + VGIFLD VSF++ G H++TF S + L +F
Sbjct: 398 SPPTSLHLHEQPLLVGIFLDYEAGVVSFYNGNTGCHIFTFPKASFSDTLRPYFQVYQYSP 457
Query: 288 ---PPNGD 292
PP GD
Sbjct: 458 LFLPPPGD 465
Score = 45.4 bits (106), Expect = 6e-05
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 36 EASSCPVCSDYLEKPMSLECGCAVCFKCI-----NSLQKEPHGEDLLCCCCSMVSQKNKI 90
E ++C +C + P+S+ CG + C CI N QK+ E C C + +
Sbjct: 12 EEATCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFHMDSL 71
Query: 91 RPSWQLERLASHIKELEPKL 110
RP+ QL L +KE + ++
Sbjct: 72 RPNKQLGSLIEALKETDQEM 91
>gi|37622899 ring finger protein 137 [Homo sapiens]
Length = 485
Score = 124 bits (310), Expect = 1e-28
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 3/209 (1%)
Query: 93 SWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRSGCI 152
SW L++ EL+ + +L + ++ + D+ LD DTA + L++S+D + V G
Sbjct: 272 SWSLQQPEPISLELKTDCR-VLGLREILKTYAADVRLDPDTAYSRLIVSEDRKRVHYGDT 330
Query: 153 TQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHLTTE 212
Q D ERF +LGS + GRHYWEV+VG +EW LGVC+++V RK ++L+
Sbjct: 331 NQKLPDNPERFYRYNIVLGSQCISSGRHYWEVEVGDRSEWGLGVCKQNVDRKEVVYLSPH 390
Query: 213 RGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFD-AEGGSHVYTFR 271
GFW + LR G+ A T L + +RVGIF+D ++SF++ + GSH++TF
Sbjct: 391 YGFWVIRLRKGNEYRAGTDEYPILSLPVPPRRVGIFVDYEAHDISFYNVTDCGSHIFTFP 450
Query: 272 SVSAEEPLHLFFAP-PSPPNGDKSVLSIC 299
L +F+P S + + L+IC
Sbjct: 451 RYPFPGRLLPYFSPCYSIGTNNTAPLAIC 479
Score = 54.7 bits (130), Expect = 1e-07
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 36 EASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGED----LLCCCCSMVSQKNKIR 91
E +CP+C +L +PMS++CG + C C++ L + P GE C C Q +R
Sbjct: 12 EEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIP-GESQNWGYTCPLCRAPVQPRNLR 70
Query: 92 PSWQLERLASHIKEL 106
P+WQL + ++ L
Sbjct: 71 PNWQLANVVEKVRLL 85
>gi|63054855 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 123 bits (308), Expect = 2e-28
Identities = 81/207 (39%), Positives = 110/207 (53%), Gaps = 6/207 (2%)
Query: 98 RLASHIKELEPKLK-KILQMNPRMRKFQ---VDMTLDADTANNFLLISDDLRSVRSGCIT 153
+L +K+L +LK K N R+ + V +TLD DTA+ L++S+D R VR G
Sbjct: 207 KLHKAVKKLRSELKLKRAAANSGWRRARLHFVAVTLDPDTAHPKLILSEDQRCVRLGDRR 266
Query: 154 QNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHLTTER 213
Q D +RFD + ILGS FT G HYWEV VG T+W LGVC ESV RKG++ +
Sbjct: 267 QPVPDNPQRFDFVVSILGSEYFTTGCHYWEVYVGDKTKWILGVCSESVSRKGKVTASPAN 326
Query: 214 GFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSV 273
G W + G+ A T P T + + VGIFLD +SF++ SH++TF +
Sbjct: 327 GHWLLRQSRGNEYEALTSPQTSFRLKEPPRCVGIFLDYEAGVISFYNVTNKSHIFTF-TH 385
Query: 274 SAEEPLHLFFAPPSPPNGDKSV-LSIC 299
+ PL FF P G + L IC
Sbjct: 386 NFSGPLRPFFEPCLHDGGKNTAPLVIC 412
>gi|19923536 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 123 bits (308), Expect = 2e-28
Identities = 81/207 (39%), Positives = 110/207 (53%), Gaps = 6/207 (2%)
Query: 98 RLASHIKELEPKLK-KILQMNPRMRKFQ---VDMTLDADTANNFLLISDDLRSVRSGCIT 153
+L +K+L +LK K N R+ + V +TLD DTA+ L++S+D R VR G
Sbjct: 207 KLHKAVKKLRSELKLKRAAANSGWRRARLHFVAVTLDPDTAHPKLILSEDQRCVRLGDRR 266
Query: 154 QNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHLTTER 213
Q D +RFD + ILGS FT G HYWEV VG T+W LGVC ESV RKG++ +
Sbjct: 267 QPVPDNPQRFDFVVSILGSEYFTTGCHYWEVYVGDKTKWILGVCSESVSRKGKVTASPAN 326
Query: 214 GFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSV 273
G W + G+ A T P T + + VGIFLD +SF++ SH++TF +
Sbjct: 327 GHWLLRQSRGNEYEALTSPQTSFRLKEPPRCVGIFLDYEAGVISFYNVTNKSHIFTF-TH 385
Query: 274 SAEEPLHLFFAPPSPPNGDKSV-LSIC 299
+ PL FF P G + L IC
Sbjct: 386 NFSGPLRPFFEPCLHDGGKNTAPLVIC 412
>gi|37595541 tripartite motif-containing 69 isoform b [Homo sapiens]
Length = 341
Score = 122 bits (306), Expect = 4e-28
Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Query: 127 MTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDV 186
+TLD TA+ L++S SV G I + D ERFD S+ +LGS FT G+ YWEV+V
Sbjct: 166 LTLDPKTAHPNLVLSKSQTSVWHGDIKKIMPDDPERFDSSVAVLGSRGFTSGKWYWEVEV 225
Query: 187 GTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVG 246
T+W +GV RES+ RKG LT E+GFW + LR+ + L A +P L + L +VG
Sbjct: 226 AKKTKWTVGVVRESIIRKGSCPLTPEQGFWLLRLRNQTDLKALDLPSFSLTLTNNLDKVG 285
Query: 247 IFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAP 285
I+LD +SF++A+ +H+YTF + E+ L+ +F P
Sbjct: 286 IYLDYEGGQLSFYNAKTMTHIYTFSNTFMEK-LYPYFCP 323
>gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens]
Length = 500
Score = 122 bits (306), Expect = 4e-28
Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Query: 127 MTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDV 186
+TLD TA+ L++S SV G I + D ERFD S+ +LGS FT G+ YWEV+V
Sbjct: 325 LTLDPKTAHPNLVLSKSQTSVWHGDIKKIMPDDPERFDSSVAVLGSRGFTSGKWYWEVEV 384
Query: 187 GTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVG 246
T+W +GV RES+ RKG LT E+GFW + LR+ + L A +P L + L +VG
Sbjct: 385 AKKTKWTVGVVRESIIRKGSCPLTPEQGFWLLRLRNQTDLKALDLPSFSLTLTNNLDKVG 444
Query: 247 IFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAP 285
I+LD +SF++A+ +H+YTF + E+ L+ +F P
Sbjct: 445 IYLDYEGGQLSFYNAKTMTHIYTFSNTFMEK-LYPYFCP 482
Score = 43.9 bits (102), Expect = 2e-04
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 40 CPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERL 99
CP+C+D+ P+ L CG C CI + ++ C C M+ Q N + L++L
Sbjct: 41 CPLCNDWFRDPLMLSCGHNFCEACIQDFWR-LQAKETFCPECKMLCQYNNCTFNPVLDKL 99
Query: 100 ASHIKELE------------PKLKKILQMNPRMRKFQV-DMTLDADTANNFLLISD 142
IK+L LK + + ++ FQ D L + FL ISD
Sbjct: 100 VEKIKKLPLLKGHPQCPEHGENLKLFSKPDGKLICFQCKDARLSVGQSKEFLQISD 155
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,871,744
Number of Sequences: 37866
Number of extensions: 577041
Number of successful extensions: 2011
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1592
Number of HSP's gapped (non-prelim): 293
length of query: 317
length of database: 18,247,518
effective HSP length: 102
effective length of query: 215
effective length of database: 14,385,186
effective search space: 3092814990
effective search space used: 3092814990
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.