Guide to the Human Genome
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Name: RFPL4A Sequence: fasta or formatted (287aa) NCBI GI: 222446629
Description:

ret finger protein-like 4A

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         14           2
 C cysteine            4.9         14           2
 D aspartate           5.6         16           2
 E glutamate           5.9         17           2
 F phenylalanine       4.9         14           2
 G glycine             5.9         17           1
 H histidine           2.1          6           1
 I isoleucine          5.6         16           2
 K lysine              6.3         18           1
 L leucine             8.4         24           2
 M methionine          2.1          6           1
 N asparagine          2.8          8           2
 P proline             4.9         14           1
 Q glutamine           4.5         13           1
 R arginine            5.9         17           1
 S serine              9.1         26           2
 T threonine           3.8         11           1
 V valine              9.1         26           2
 W tryptophan          1.4          4           1
 Y tyrosine            2.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ret finger protein-like 4A 
RFPL1                 0.566   ret finger protein-like 1 
RFPL3                 0.552   ret finger protein-like 3 isoform 1 
RFPL3                 0.552   ret finger protein-like 3 isoform 2 
RFPL2                 0.531   ret finger protein-like 2 isoform 3 
RFPL2                 0.531   ret finger protein-like 2 isoform 3 
RFPL2                 0.531   ret finger protein-like 2 isoform 1 
RFPL2                 0.531   ret finger protein-like 2 isoform 2 
TRIM27                0.230   ret finger protein 
TRIM21                0.214   tripartite motif protein 21 
RFPL4B                0.204   ret finger protein-like 4B 
TRIM11                0.202   tripartite motif-containing 11 
BTN3A3                0.198   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A3                0.198   butyrophilin, subfamily 3, member A3 isoform b [Homo...
BTN1A1                0.195   butyrophilin, subfamily 1, member A1 
MEFV                  0.193   Mediterranean fever protein 
TRIM39                0.193   tripartite motif-containing 39 isoform 2 
TRIML1                0.191   tripartite motif family-like 1 
TRIM39                0.191   tripartite motif-containing 39 isoform 1 
BTN3A1                0.191   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTN3A1                0.191   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN2A1                0.189   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTN2A2                0.189   butyrophilin, subfamily 2, member A2 isoform b [Homo...
BTN2A2                0.189   butyrophilin, subfamily 2, member A2 isoform a 
ERMAP                 0.188   erythroblast membrane-associated protein precursor [...
ERMAP                 0.188   erythroblast membrane-associated protein precursor [...
TRIM38                0.181   tripartite motif-containing 38 
TRIM68                0.177   ring finger protein 137 
TRIM58                0.175   tripartite motif-containing 58 
TRIM50                0.145   tripartite motif protein 50A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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