Guide to the Human Genome
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Name: RFPL2 Sequence: fasta or formatted (288aa) NCBI GI: 227116308
Description:

ret finger protein-like 2 isoform 3

Not currently referenced in the text

Other entries for this name:
alt prot {317aa} ret finger protein-like 2 isoform 1
alt prot {378aa} ret finger protein-like 2 isoform 2
alt mRNA {288aa} ret finger protein-like 2 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         14           2
 C cysteine            4.9         14           3
 D aspartate           5.6         16           2
 E glutamate           5.9         17           2
 F phenylalanine       4.5         13           2
 G glycine             6.2         18           2
 H histidine           1.7          5           1
 I isoleucine          3.5         10           1
 K lysine              4.5         13           2
 L leucine            10.8         31           2
 M methionine          3.1          9           1
 N asparagine          3.8         11           2
 P proline             5.2         15           2
 Q glutamine           3.8         11           1
 R arginine            8.7         25           2
 S serine              9.0         26           2
 T threonine           4.9         14           2
 V valine              7.3         21           1
 W tryptophan          1.0          3           1
 Y tyrosine            0.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ret finger protein-like 2 isoform 3 
RFPL2                 1.000   ret finger protein-like 2 isoform 3 
RFPL2                 1.000   ret finger protein-like 2 isoform 1 
RFPL2                 1.000   ret finger protein-like 2 isoform 2 
RFPL3                 0.943   ret finger protein-like 3 isoform 1 
RFPL3                 0.943   ret finger protein-like 3 isoform 2 
RFPL1                 0.901   ret finger protein-like 1 
RFPL4A                0.532   ret finger protein-like 4A 
TRIM27                0.222   ret finger protein 
BTN3A3                0.220   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A3                0.220   butyrophilin, subfamily 3, member A3 isoform b [Homo...
RFPL4B                0.216   ret finger protein-like 4B 
MEFV                  0.213   Mediterranean fever protein 
BTN3A1                0.213   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTN3A1                0.213   butyrophilin, subfamily 3, member A1 isoform a [Homo...
TRIML1                0.206   tripartite motif family-like 1 
TRIM21                0.204   tripartite motif protein 21 
BTN1A1                0.193   butyrophilin, subfamily 1, member A1 
BTN2A2                0.193   butyrophilin, subfamily 2, member A2 isoform b [Homo...
BTN2A2                0.193   butyrophilin, subfamily 2, member A2 isoform a 
BTN2A1                0.193   butyrophilin, subfamily 2, member A1 isoform 1 precur...
TRIM11                0.190   tripartite motif-containing 11 
TRIM39                0.188   tripartite motif-containing 39 isoform 2 
TRIM39                0.188   tripartite motif-containing 39 isoform 1 
ERMAP                 0.179   erythroblast membrane-associated protein precursor [...
ERMAP                 0.179   erythroblast membrane-associated protein precursor [...
TRIM38                0.177   tripartite motif-containing 38 
TRIM69                0.172   tripartite motif-containing 69 isoform b 
TRIM69                0.172   tripartite motif-containing 69 isoform a 
TRIM68                0.167   ring finger protein 137 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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