Guide to the Human Genome
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Name: FAM75B Sequence: fasta or formatted (182aa) NCBI GI: 149363676
Description:

hypothetical protein LOC404770

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         14           2
 C cysteine            3.3          6           1
 D aspartate           4.9          9           1
 E glutamate           6.0         11           2
 F phenylalanine       1.1          2           1
 G glycine             6.6         12           1
 H histidine           2.2          4           2
 I isoleucine          2.2          4           2
 K lysine              3.3          6           1
 L leucine            16.5         30           4
 M methionine          1.6          3           1
 N asparagine          0.5          1           1
 P proline            14.8         27           2
 Q glutamine           3.8          7           1
 R arginine            4.9          9           1
 S serine              9.9         18           2
 T threonine           5.5         10           2
 V valine              1.6          3           1
 W tryptophan          2.7          5           2
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC404770 
FAM75C1               0.579   family with sequence similarity 75, member C1 [Homo...
FAM75A6               0.540   hypothetical protein LOC389730 
FAM75A7               0.540   hypothetical protein LOC26165 
FAM75A3               0.538   hypothetical protein LOC727830 
FAM75A1               0.538   hypothetical protein LOC647060 
FAM75A4               0.529   PREDICTED: family with sequence similarity 75, memb...
FAM75A4               0.529   PREDICTED: family with sequence similarity 75, memb...
FAM75A5               0.529   hypothetical protein LOC727905 
FAM75A2               0.526   hypothetical protein LOC642265 
C9orf79               0.123   chromosome 9 open reading frame 79 
FLJ46321              0.067   hypothetical protein LOC389763 
FLJ44082              0.058   hypothetical protein LOC389762 
FLJ43859              0.058   hypothetical protein LOC389761 
LOC729569             0.053   PREDICTED: hypothetical protein 
MED15                 0.045   mediator complex subunit 15 isoform a 
MED15                 0.039   mediator complex subunit 15 isoform b 
MBD6                  0.039   methyl-CpG binding domain protein 6 
MKL1                  0.039   megakaryoblastic leukemia 1 protein 
LOC100289470          0.036   PREDICTED: hypothetical protein XP_002342626 
SON                   0.033   SON DNA-binding protein isoform F 
SON                   0.033   SON DNA-binding protein isoform B 
DCST2                 0.033   DC-STAMP domain containing 2 
LOC285679             0.033   hypothetical protein LOC285679 
NRG2                  0.031   neuregulin 2 isoform 2 
NRG2                  0.031   neuregulin 2 isoform 4 
NRG2                  0.031   neuregulin 2 isoform 3 
NRG2                  0.031   neuregulin 2 isoform 1 
PRRT3                 0.031   proline-rich transmembrane protein 3 
FLJ22184              0.028   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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