Guide to the Human Genome
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Name: FLJ46321 Sequence: fasta or formatted (1576aa) NCBI GI: 48717285
Description:

hypothetical protein LOC389763

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         55           2
 C cysteine            1.8         29           1
 D aspartate           4.2         66           1
 E glutamate           5.5         87           5
 F phenylalanine       4.3         68           2
 G glycine             5.1         81           2
 H histidine           3.9         62           2
 I isoleucine          4.1         64           2
 K lysine              6.0         95           2
 L leucine            10.2        161           2
 M methionine          1.5         23           2
 N asparagine          3.4         53           2
 P proline             8.9        140           4
 Q glutamine           6.0         95           2
 R arginine            5.5         86           3
 S serine             13.1        206           2
 T threonine           5.6         89           2
 V valine              5.4         85           2
 W tryptophan          1.1         18           2
 Y tyrosine            0.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC389763 
FLJ43859              0.525   hypothetical protein LOC389761 
FLJ44082              0.524   hypothetical protein LOC389762 
FAM75A5               0.075   hypothetical protein LOC727905 
FAM75A4               0.075   PREDICTED: family with sequence similarity 75, memb...
FAM75A7               0.074   hypothetical protein LOC26165 
FAM75A2               0.074   hypothetical protein LOC642265 
FAM75A3               0.074   hypothetical protein LOC727830 
FAM75A4               0.074   PREDICTED: family with sequence similarity 75, memb...
FAM75A1               0.074   hypothetical protein LOC647060 
FAM75A6               0.074   hypothetical protein LOC389730 
C9orf79               0.055   chromosome 9 open reading frame 79 
FAM75C1               0.041   family with sequence similarity 75, member C1 [Homo...
C9orf144B             0.023   hypothetical protein LOC259308 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.009   PREDICTED: hypothetical protein LOC80164 
FAM75B                0.008   hypothetical protein LOC404770 
MYPOP                 0.007   Myb protein P42POP 
MLL2                  0.007   myeloid/lymphoid or mixed-lineage leukemia 2 
SETD1A                0.007   SET domain containing 1A 
MUC7                  0.007   mucin 7, secreted precursor 
MUC7                  0.007   mucin 7, secreted precursor 
MUC7                  0.007   mucin 7, secreted precursor 
LOC284297             0.006   hypothetical protein LOC284297 
RAPH1                 0.006   Ras association and pleckstrin homology domains 1 is...
PHC3                  0.006   polyhomeotic like 3 
SRCAP                 0.006   Snf2-related CBP activator protein 
PRR12                 0.006   proline rich 12 
ENAH                  0.006   enabled homolog isoform a 
ENAH                  0.006   enabled homolog isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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