Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 148839378
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo
sapiens]
(294 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens] 613 e-176
gi|22779877 connexin 46 [Homo sapiens] 208 5e-54
gi|55953076 connexin 50 [Homo sapiens] 198 5e-51
gi|62865885 connexin 37 [Homo sapiens] 187 1e-47
gi|32483412 connexin 40 [Homo sapiens] 182 2e-46
gi|6631083 connexin 40 [Homo sapiens] 182 2e-46
gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens] 180 2e-45
gi|14211941 gap junction protein, alpha 10 [Homo sapiens] 177 1e-44
gi|122939172 connexin 45 [Homo sapiens] 173 1e-43
gi|69122473 connexin 45 [Homo sapiens] 173 1e-43
gi|4504001 connexin 43 [Homo sapiens] 171 5e-43
gi|148233402 gap junction protein, beta 1, 32kDa [Homo sapiens] 154 9e-38
gi|4504005 gap junction protein, beta 1, 32kDa [Homo sapiens] 154 9e-38
gi|145699105 connexin40.1 [Homo sapiens] 153 2e-37
gi|42558283 gap junction protein beta 2 [Homo sapiens] 149 3e-36
gi|23397464 gap junction protein, beta 4 [Homo sapiens] 149 4e-36
gi|159032020 gap junction protein, beta 6 [Homo sapiens] 147 1e-35
gi|158966714 gap junction protein, beta 6 [Homo sapiens] 147 1e-35
gi|158966717 gap junction protein, beta 6 [Homo sapiens] 147 1e-35
gi|40254837 gap junction protein, beta 6 [Homo sapiens] 147 1e-35
gi|38348412 gap junction protein, beta 7, 25kDa [Homo sapiens] 137 9e-33
gi|54607056 connexin 31 [Homo sapiens] 135 4e-32
gi|13128960 connexin 31 [Homo sapiens] 135 4e-32
gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens] 130 1e-30
gi|10835079 gap junction protein, beta 5, 31.1kDa [Homo sapiens] 129 2e-30
gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens] 129 4e-30
gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens] 111 7e-25
gi|169171704 PREDICTED: similar to hCG1770601 [Homo sapiens] 87 2e-17
gi|169171845 PREDICTED: similar to hCG1770601 [Homo sapiens] 87 2e-17
gi|169171183 PREDICTED: similar to hCG1770601 [Homo sapiens] 87 2e-17
>gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens]
Length = 294
Score = 613 bits (1581), Expect = e-176
Identities = 294/294 (100%), Positives = 294/294 (100%)
Query: 1 MGEWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPG 60
MGEWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPG
Sbjct: 1 MGEWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPG 60
Query: 61 CRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEA 120
CRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEA
Sbjct: 61 CRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEA 120
Query: 121 QCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLYGFRVAPHFACAGPPCPHTVDCF 180
QCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLYGFRVAPHFACAGPPCPHTVDCF
Sbjct: 121 QCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLYGFRVAPHFACAGPPCPHTVDCF 180
Query: 181 VSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWKGRPRAGERDNRCNRAHEEAQKLLPP 240
VSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWKGRPRAGERDNRCNRAHEEAQKLLPP
Sbjct: 181 VSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWKGRPRAGERDNRCNRAHEEAQKLLPP 240
Query: 241 PPPPPPPPALPSRRPGPEPCAPPAYAHPAPASLRECGSGRGKASPATGRRDLAI 294
PPPPPPPPALPSRRPGPEPCAPPAYAHPAPASLRECGSGRGKASPATGRRDLAI
Sbjct: 241 PPPPPPPPALPSRRPGPEPCAPPAYAHPAPASLRECGSGRGKASPATGRRDLAI 294
>gi|22779877 connexin 46 [Homo sapiens]
Length = 435
Score = 208 bits (529), Expect = 5e-54
Identities = 120/308 (38%), Positives = 162/308 (52%), Gaps = 20/308 (6%)
Query: 1 MGEWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPG 60
MG+W+FLG LL+ Q S ++G++WL V+ IFRILVL V+ DEQ +F CNT QPG
Sbjct: 1 MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQPG 60
Query: 61 CRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMH-----RAGKEAGGAEAAAQCAP 115
C CYDRAFP+SH RFW I+ +S P ++++ + +H KE E + +P
Sbjct: 61 CENVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLHIVRMEEKKKEREEEEQLKRESP 120
Query: 116 GLPEAQCAPCALRARRAR--------RCYLLSVALRLLAELTFLGGQALLYGFRVAPHFA 167
E + R R R R Y+ ++ + L E+ F+ GQ LYGF + P +
Sbjct: 121 SPKEPPQDNPSSRDDRGRVRMAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGFELKPLYR 180
Query: 168 CAGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWKGRPRAGERDNRC 227
C PCP+TVDCF+SRPTEKT+F++F AV S LL++ E+ HL WK + + G
Sbjct: 181 CDRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHLGWK-KLKQGVTSRLG 239
Query: 228 NRAHEEAQKLLPPPPPPPPPPALPSRRPGPEPCAPPAYAH-PAPASLRECGSGRGKASPA 286
A E PPP PP SR P PP YAH AP G PA
Sbjct: 240 PDASEAPLGTADPPPLPP-----SSRPPAVAIGFPPYYAHTAAPLGQARAVGYPGAPPPA 294
Query: 287 TGRRDLAI 294
+ LA+
Sbjct: 295 ADFKLLAL 302
>gi|55953076 connexin 50 [Homo sapiens]
Length = 433
Score = 198 bits (503), Expect = 5e-51
Identities = 98/231 (42%), Positives = 141/231 (61%), Gaps = 15/231 (6%)
Query: 1 MGEWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPG 60
MG+W+FLG++L+ V S ++GR+WL V+ IFRIL+L T V+ DEQ +FVCNT QPG
Sbjct: 1 MGDWSFLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAAEFVWGDEQSDFVCNTQQPG 60
Query: 61 CRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMH-------RAGKEAG--GAEAAA 111
C CYD AFP+SH R W+ I+ +S P +++V +++H R +EA G +A
Sbjct: 61 CENVCYDEAFPISHIRLWVLQIIFVSTPSLMYVGHAVHYVRMEEKRKSREAEELGQQAGT 120
Query: 112 QCAPGLPEAQCAPCALRARRAR------RCYLLSVALRLLAELTFLGGQALLYGFRVAPH 165
P + + + ++ R R Y+ + + L E+ F+ G LYGFR+ P
Sbjct: 121 NGGPDQGSVKKSSGSKGTKKFRLEGTLLRTYICHIIFKTLFEVGFIVGHYFLYGFRILPL 180
Query: 166 FACAGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWKG 216
+ C+ PCP+ VDCFVSRPTEKT+F+LF +V +S L+V ELGHL KG
Sbjct: 181 YRCSRWPCPNVVDCFVSRPTEKTIFILFMLSVASVSLFLNVMELGHLGLKG 231
>gi|62865885 connexin 37 [Homo sapiens]
Length = 333
Score = 187 bits (475), Expect = 1e-47
Identities = 97/232 (41%), Positives = 136/232 (58%), Gaps = 19/232 (8%)
Query: 1 MGEWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPG 60
MG+W FL LLD VQ S +VG++WL V+ IFRIL+L G +V+ DEQ +F CNT QPG
Sbjct: 1 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG 60
Query: 61 CRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFV--VYSMHRAGKEAGGAEAAAQCAPGL- 117
C CYD+AFP+SH R+W+ L +S P ++++ V + R + E + P
Sbjct: 61 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD 120
Query: 118 PEAQCAPCALRARRAR----------------RCYLLSVALRLLAELTFLGGQALLYGFR 161
P+ + A A+ + A+ Y+ SV + + E FL GQ LYG+
Sbjct: 121 PQVERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGWT 180
Query: 162 VAPHFACAGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLL 213
+ P F C PCP+ VDCFVSRPTEKT+F++F VGL+S +L++ EL HLL
Sbjct: 181 MEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLL 232
>gi|32483412 connexin 40 [Homo sapiens]
Length = 358
Score = 182 bits (463), Expect = 2e-46
Identities = 93/233 (39%), Positives = 135/233 (57%), Gaps = 19/233 (8%)
Query: 1 MGEWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPG 60
MG+W+FLG+ L+ V S +VG++WL V+ IFR+LVL T + + DEQ +F C+T+QPG
Sbjct: 1 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG 60
Query: 61 CRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMH-------------RAGKEAGGA 107
C+ CYD+AFP+SH R+W+ I+ +S P ++++ ++MH KE G+
Sbjct: 61 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS 120
Query: 108 EAAAQCAPGLPEAQC-----APCALRARRARRCYLLSVALRLLAELTFLGGQALLYGFRV 162
+ E C AL+ Y+ S+ +R E+ F+ GQ +YG +
Sbjct: 121 GSYEYPVAEKAELSCWEEGNGRIALQG-TLLNTYVCSILIRTTMEVGFIVGQYFIYGIFL 179
Query: 163 APHFACAGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWK 215
C PCPH V+C+VSRPTEK VF++F AV LS LLS+AEL HL WK
Sbjct: 180 TTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWK 232
>gi|6631083 connexin 40 [Homo sapiens]
Length = 358
Score = 182 bits (463), Expect = 2e-46
Identities = 93/233 (39%), Positives = 135/233 (57%), Gaps = 19/233 (8%)
Query: 1 MGEWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPG 60
MG+W+FLG+ L+ V S +VG++WL V+ IFR+LVL T + + DEQ +F C+T+QPG
Sbjct: 1 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG 60
Query: 61 CRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMH-------------RAGKEAGGA 107
C+ CYD+AFP+SH R+W+ I+ +S P ++++ ++MH KE G+
Sbjct: 61 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS 120
Query: 108 EAAAQCAPGLPEAQC-----APCALRARRARRCYLLSVALRLLAELTFLGGQALLYGFRV 162
+ E C AL+ Y+ S+ +R E+ F+ GQ +YG +
Sbjct: 121 GSYEYPVAEKAELSCWEEGNGRIALQG-TLLNTYVCSILIRTTMEVGFIVGQYFIYGIFL 179
Query: 163 APHFACAGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWK 215
C PCPH V+C+VSRPTEK VF++F AV LS LLS+AEL HL WK
Sbjct: 180 TTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWK 232
>gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens]
Length = 515
Score = 180 bits (456), Expect = 2e-45
Identities = 91/254 (35%), Positives = 142/254 (55%), Gaps = 21/254 (8%)
Query: 1 MGEWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPG 60
MG+W LG L+ V + S ++G++WL ++ IFR+LVL V+ DEQ F+CNT QPG
Sbjct: 1 MGDWNLLGDTLEEVHIHSTMIGKIWLTILFIFRMLVLGVAAEDVWNDEQSGFICNTEQPG 60
Query: 61 CRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAG-KEAGGAEAAAQCAPGLPE 119
CR CYD+AFP+S R+W+ ++ +S+P ++++ ++++R E AQ L E
Sbjct: 61 CRNVCYDQAFPISLIRYWVLQVIFVSSPSLVYMGHALYRLRVLEEERQRMKAQLRVELEE 120
Query: 120 AQCAP-----------CALRARRARRC---------YLLSVALRLLAELTFLGGQALLYG 159
+ C L R+ + Y++ + R + E+ F+ GQ LLYG
Sbjct: 121 VEFEMPRDRRRLEQELCQLEKRKLNKAPLRGTLLCTYVIHIFTRSVVEVGFMIGQYLLYG 180
Query: 160 FRVAPHFACAGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWKGRPR 219
F + P F C G PCP+ +DCFVSRPTEKT+F+LF ++ +S L++ E+ HL +K R
Sbjct: 181 FHLEPLFKCHGHPCPNIIDCFVSRPTEKTIFLLFMQSIATISLFLNILEIFHLGFKKIKR 240
Query: 220 AGERDNRCNRAHEE 233
+ + H E
Sbjct: 241 GLWGKYKLKKEHNE 254
>gi|14211941 gap junction protein, alpha 10 [Homo sapiens]
Length = 543
Score = 177 bits (449), Expect = 1e-44
Identities = 90/233 (38%), Positives = 136/233 (58%), Gaps = 21/233 (9%)
Query: 1 MGEWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPG 60
MG+W LG +L+ V S +VG++WL ++ IFR+LVL V++DEQ F CNT QPG
Sbjct: 1 MGDWNLLGGILEEVHSHSTIVGKIWLTILFIFRMLVLRVAAEDVWDDEQSAFACNTRQPG 60
Query: 61 CRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHR-----AGKEAGGAEAAAQCAP 115
C CYD AFP+S RFW+ I+ +S+P ++++ ++++R ++ + AQ
Sbjct: 61 CNNICYDDAFPISLIRFWVLQIIFVSSPSLVYMGHALYRLRAFEKDRQRKKSHLRAQMEN 120
Query: 116 ---GLPEAQCAPCALRARRAR-------------RCYLLSVALRLLAELTFLGGQALLYG 159
L E Q LR + R Y+L + R + E+ F+ GQ +LYG
Sbjct: 121 PDLDLEEQQRIDRELRRLEEQKRIHKVPLKGCLLRTYVLHILTRSVLEVGFMIGQYILYG 180
Query: 160 FRVAPHFACAGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHL 212
F++ P + C PPCP+ VDCFVSRPTEKT+F+LF ++ +S LL++ E+ HL
Sbjct: 181 FQMHPLYKCTQPPCPNAVDCFVSRPTEKTIFMLFMHSIAAISLLLNILEIFHL 233
>gi|122939172 connexin 45 [Homo sapiens]
Length = 396
Score = 173 bits (439), Expect = 1e-43
Identities = 93/252 (36%), Positives = 137/252 (54%), Gaps = 44/252 (17%)
Query: 4 WAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQ 63
W+FL LL+ + S VG++WL V+++FRI++ A G +++ DEQ +FVCNT QPGC
Sbjct: 3 WSFLTRLLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCEN 62
Query: 64 TCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLP----- 118
CYD P+SH RFW+F I+L++ P V+++ Y++H+ K G EA + A P
Sbjct: 63 VCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIAKMEHG-EADKKAARSKPYAMRW 121
Query: 119 ---------------------------------EAQCAPCALRARRAR-----RCYLLSV 140
++Q P RR R + Y+L +
Sbjct: 122 KQHRALEETEEDNEEDPMMYPEMELESDKENKEQSQPKPKHDGRRRIREDGLMKIYVLQL 181
Query: 141 ALRLLAELTFLGGQALLYGFRVAPHFACAGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLL 200
R + E+ FL GQ LYGF+V P + C+ PCPH +DCF+SRPTEKT+F+L + V L
Sbjct: 182 LARTVFEVGFLIGQYFLYGFQVHPFYVCSRLPCPHKIDCFISRPTEKTIFLLIMYGVTGL 241
Query: 201 SALLSVAELGHL 212
LL++ E+ HL
Sbjct: 242 CLLLNIWEMLHL 253
>gi|69122473 connexin 45 [Homo sapiens]
Length = 396
Score = 173 bits (439), Expect = 1e-43
Identities = 93/252 (36%), Positives = 137/252 (54%), Gaps = 44/252 (17%)
Query: 4 WAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQ 63
W+FL LL+ + S VG++WL V+++FRI++ A G +++ DEQ +FVCNT QPGC
Sbjct: 3 WSFLTRLLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCEN 62
Query: 64 TCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLP----- 118
CYD P+SH RFW+F I+L++ P V+++ Y++H+ K G EA + A P
Sbjct: 63 VCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIAKMEHG-EADKKAARSKPYAMRW 121
Query: 119 ---------------------------------EAQCAPCALRARRAR-----RCYLLSV 140
++Q P RR R + Y+L +
Sbjct: 122 KQHRALEETEEDNEEDPMMYPEMELESDKENKEQSQPKPKHDGRRRIREDGLMKIYVLQL 181
Query: 141 ALRLLAELTFLGGQALLYGFRVAPHFACAGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLL 200
R + E+ FL GQ LYGF+V P + C+ PCPH +DCF+SRPTEKT+F+L + V L
Sbjct: 182 LARTVFEVGFLIGQYFLYGFQVHPFYVCSRLPCPHKIDCFISRPTEKTIFLLIMYGVTGL 241
Query: 201 SALLSVAELGHL 212
LL++ E+ HL
Sbjct: 242 CLLLNIWEMLHL 253
>gi|4504001 connexin 43 [Homo sapiens]
Length = 382
Score = 171 bits (434), Expect = 5e-43
Identities = 86/235 (36%), Positives = 130/235 (55%), Gaps = 19/235 (8%)
Query: 1 MGEWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPG 60
MG+W+ LG LLD VQ S G++WL V+ IFRIL+L T + + DEQ F CNT QPG
Sbjct: 1 MGDWSALGKLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPG 60
Query: 61 CRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEA 120
C CYD++FP+SH RFW+ I+ +S P +L++ + + KE + + +
Sbjct: 61 CENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRKEEKLNKKEEELKVAQTDG 120
Query: 121 QCAPCALRARRAR-------------------RCYLLSVALRLLAELTFLGGQALLYGFR 161
L+ + R Y++S+ + + E+ FL Q +YGF
Sbjct: 121 VNVDMHLKQIEIKKFKYGIEEHGKVKMRGGLLRTYIISILFKSIFEVAFLLIQWYIYGFS 180
Query: 162 VAPHFACAGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWKG 216
++ + C PCPH VDCF+SRPTEKT+F++F V L+S L++ EL ++ +KG
Sbjct: 181 LSAVYTCKRDPCPHQVDCFLSRPTEKTIFIIFMLVVSLVSLALNIIELFYVFFKG 235
>gi|148233402 gap junction protein, beta 1, 32kDa [Homo sapiens]
Length = 283
Score = 154 bits (389), Expect = 9e-38
Identities = 86/221 (38%), Positives = 120/221 (54%), Gaps = 1/221 (0%)
Query: 4 WAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQ 63
W L +LL V S +GR+WL V+ IFRI+VL +V+ DE+ F+CNTLQPGC
Sbjct: 3 WTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGCNS 62
Query: 64 TCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEAQCA 123
CYD+ FP+SH R W ++L+S P +L ++ H+ E P E
Sbjct: 63 VCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEVKR 122
Query: 124 PCALRARRARRCYLLSVALRLLAELTFLGGQALLY-GFRVAPHFACAGPPCPHTVDCFVS 182
+ Y++SV RLL E F+ LLY G+ + C PCP+TVDCFVS
Sbjct: 123 HKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCFVS 182
Query: 183 RPTEKTVFVLFYFAVGLLSALLSVAELGHLLWKGRPRAGER 223
RPTEKTVF +F A + +L+VAE+ +L+ + R +R
Sbjct: 183 RPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQR 223
>gi|4504005 gap junction protein, beta 1, 32kDa [Homo sapiens]
Length = 283
Score = 154 bits (389), Expect = 9e-38
Identities = 86/221 (38%), Positives = 120/221 (54%), Gaps = 1/221 (0%)
Query: 4 WAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQ 63
W L +LL V S +GR+WL V+ IFRI+VL +V+ DE+ F+CNTLQPGC
Sbjct: 3 WTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGCNS 62
Query: 64 TCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEAQCA 123
CYD+ FP+SH R W ++L+S P +L ++ H+ E P E
Sbjct: 63 VCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEVKR 122
Query: 124 PCALRARRARRCYLLSVALRLLAELTFLGGQALLY-GFRVAPHFACAGPPCPHTVDCFVS 182
+ Y++SV RLL E F+ LLY G+ + C PCP+TVDCFVS
Sbjct: 123 HKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCFVS 182
Query: 183 RPTEKTVFVLFYFAVGLLSALLSVAELGHLLWKGRPRAGER 223
RPTEKTVF +F A + +L+VAE+ +L+ + R +R
Sbjct: 183 RPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQR 223
>gi|145699105 connexin40.1 [Homo sapiens]
Length = 370
Score = 153 bits (386), Expect = 2e-37
Identities = 88/221 (39%), Positives = 115/221 (52%), Gaps = 29/221 (13%)
Query: 7 LGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQTCY 66
LG L+ + +VG+LW V+ ++ R+LV+ G V++DEQE FVCNTLQPGC CY
Sbjct: 7 LGFLIITLNCNVTMVGKLWFVLTMLLRMLVIVLAGRPVYQDEQERFVCNTLQPGCANVCY 66
Query: 67 DRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEAQCAPCA 126
D PVSH RFWL + + P +F VY +HR GA AA L +C
Sbjct: 67 DVFSPVSHLRFWLIQGVCVLLPSAVFSVYVLHR------GATLAA-----LGPRRCPDPR 115
Query: 127 LRARRARRC------------------YLLSVALRLLAELTFLGGQALLYGFRVAPHFAC 168
A RRC Y++ + LR L E F L+GF F C
Sbjct: 116 EPASGQRRCPRPFGERGGLQVPDFSAGYIIHLLLRTLLEAAFGALHYFLFGFLAPKKFPC 175
Query: 169 AGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLLSALLSVAEL 209
PPC VDC+VSRPTEK++ +LF +AV LS LL +A+L
Sbjct: 176 TRPPCTGVVDCYVSRPTEKSLLMLFLWAVSALSFLLGLADL 216
>gi|42558283 gap junction protein beta 2 [Homo sapiens]
Length = 226
Score = 149 bits (376), Expect = 3e-36
Identities = 82/215 (38%), Positives = 118/215 (54%), Gaps = 6/215 (2%)
Query: 3 EWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCR 62
+W L ++L V S +G++WL V+ IFRI++L V+ DEQ +FVCNTLQPGC+
Sbjct: 2 DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCK 61
Query: 63 QTCYDRAFPVSHYRFWLFHILLLSAPPVLF---VVYSMHRAGKEAGGAEAAAQCAPGLPE 119
CYD FP+SH R W ++ +S P +L V Y H ++ E ++ + E
Sbjct: 62 NVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFIKGEIKSEFKD-IEE 120
Query: 120 AQCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLY-GFRVAPHFACAGPPCPHTVD 178
+ + Y S+ R++ E F+ ++Y GF + C PCP+TVD
Sbjct: 121 IKTQKVRIEGS-LWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVD 179
Query: 179 CFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLL 213
CFVSRPTEKTVF +F AV + LL+V EL +LL
Sbjct: 180 CFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLL 214
>gi|23397464 gap junction protein, beta 4 [Homo sapiens]
Length = 266
Score = 149 bits (375), Expect = 4e-36
Identities = 84/215 (39%), Positives = 117/215 (54%), Gaps = 9/215 (4%)
Query: 4 WAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQ 63
WAFL LL V S ++ R+WL V+ IFR+LV V++DEQ++FVCNT QPGC
Sbjct: 3 WAFLQGLLSGVNKYSTVLSRIWLSVVFIFRVLVYVVAAEEVWDDEQKDFVCNTKQPGCPN 62
Query: 64 TCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEAQCA 123
CYD FPVSH R W ++L++ P +L V++ +R +E AP L +
Sbjct: 63 VCYDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREERERKHHLKHGPNAPSLYD---- 118
Query: 124 PCALRARRARR--CYLLSVALRLLAELTFLGGQALLYGFRVAPH-FACAGPPCPHTVDCF 180
L +R YLLS+ + + FL LY P AC+ PCPHTVDC+
Sbjct: 119 --NLSKKRGGLWWTYLLSLIFKAAVDAGFLYIFHRLYKDYDMPRVVACSVEPCPHTVDCY 176
Query: 181 VSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWK 215
+SRPTEK VF F + LL+++E+ +L+ K
Sbjct: 177 ISRPTEKKVFTYFMVTTAAICILLNLSEVFYLVGK 211
>gi|159032020 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 147 bits (371), Expect = 1e-35
Identities = 83/242 (34%), Positives = 128/242 (52%), Gaps = 10/242 (4%)
Query: 3 EWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCR 62
+W L + + V S +G++W+ V+ IFR+++L V+ DEQE+FVCNTLQPGC+
Sbjct: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
Query: 63 QTCYDRAFPVSHYRFWLFHILLLSAPPVL---FVVYSMHRAGKEAGGAEAAAQCAPGLPE 119
CYD FPVSH R W ++ +S P +L V Y H ++ E + +
Sbjct: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRND-FKDIED 120
Query: 120 AQCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLY-GFRVAPHFACAGPPCPHTVD 178
+ + Y S+ R++ E F+ LY G+ + C PCP+ VD
Sbjct: 121 IKKQKVRIEG-SLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVD 179
Query: 179 CFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLL----WKGRPRAGERDNRCNRAHEEA 234
CF+SRPTEKTVF +F + ++ LL+VAEL +LL ++ RA + N N A +E+
Sbjct: 180 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKES 239
Query: 235 QK 236
++
Sbjct: 240 KQ 241
>gi|158966714 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 147 bits (371), Expect = 1e-35
Identities = 83/242 (34%), Positives = 128/242 (52%), Gaps = 10/242 (4%)
Query: 3 EWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCR 62
+W L + + V S +G++W+ V+ IFR+++L V+ DEQE+FVCNTLQPGC+
Sbjct: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
Query: 63 QTCYDRAFPVSHYRFWLFHILLLSAPPVL---FVVYSMHRAGKEAGGAEAAAQCAPGLPE 119
CYD FPVSH R W ++ +S P +L V Y H ++ E + +
Sbjct: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRND-FKDIED 120
Query: 120 AQCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLY-GFRVAPHFACAGPPCPHTVD 178
+ + Y S+ R++ E F+ LY G+ + C PCP+ VD
Sbjct: 121 IKKQKVRIEG-SLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVD 179
Query: 179 CFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLL----WKGRPRAGERDNRCNRAHEEA 234
CF+SRPTEKTVF +F + ++ LL+VAEL +LL ++ RA + N N A +E+
Sbjct: 180 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKES 239
Query: 235 QK 236
++
Sbjct: 240 KQ 241
>gi|158966717 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 147 bits (371), Expect = 1e-35
Identities = 83/242 (34%), Positives = 128/242 (52%), Gaps = 10/242 (4%)
Query: 3 EWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCR 62
+W L + + V S +G++W+ V+ IFR+++L V+ DEQE+FVCNTLQPGC+
Sbjct: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
Query: 63 QTCYDRAFPVSHYRFWLFHILLLSAPPVL---FVVYSMHRAGKEAGGAEAAAQCAPGLPE 119
CYD FPVSH R W ++ +S P +L V Y H ++ E + +
Sbjct: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRND-FKDIED 120
Query: 120 AQCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLY-GFRVAPHFACAGPPCPHTVD 178
+ + Y S+ R++ E F+ LY G+ + C PCP+ VD
Sbjct: 121 IKKQKVRIEG-SLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVD 179
Query: 179 CFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLL----WKGRPRAGERDNRCNRAHEEA 234
CF+SRPTEKTVF +F + ++ LL+VAEL +LL ++ RA + N N A +E+
Sbjct: 180 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKES 239
Query: 235 QK 236
++
Sbjct: 240 KQ 241
>gi|40254837 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 147 bits (371), Expect = 1e-35
Identities = 83/242 (34%), Positives = 128/242 (52%), Gaps = 10/242 (4%)
Query: 3 EWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCR 62
+W L + + V S +G++W+ V+ IFR+++L V+ DEQE+FVCNTLQPGC+
Sbjct: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
Query: 63 QTCYDRAFPVSHYRFWLFHILLLSAPPVL---FVVYSMHRAGKEAGGAEAAAQCAPGLPE 119
CYD FPVSH R W ++ +S P +L V Y H ++ E + +
Sbjct: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRND-FKDIED 120
Query: 120 AQCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLY-GFRVAPHFACAGPPCPHTVD 178
+ + Y S+ R++ E F+ LY G+ + C PCP+ VD
Sbjct: 121 IKKQKVRIEG-SLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVD 179
Query: 179 CFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLL----WKGRPRAGERDNRCNRAHEEA 234
CF+SRPTEKTVF +F + ++ LL+VAEL +LL ++ RA + N N A +E+
Sbjct: 180 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKES 239
Query: 235 QK 236
++
Sbjct: 240 KQ 241
>gi|38348412 gap junction protein, beta 7, 25kDa [Homo sapiens]
Length = 223
Score = 137 bits (346), Expect = 9e-33
Identities = 77/213 (36%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 4 WAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQ 63
W FL LL V S G +WL V+ +FR+LV V++DEQ+EF CN+ QPGC+
Sbjct: 3 WMFLRDLLSGVNKYSTGTGWIWLAVVFVFRLLVYMVAAEHVWKDEQKEFECNSRQPGCKN 62
Query: 64 TCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEAQCA 123
C+D FP+S R W ++++S P +L V++ + G+E + +PG +
Sbjct: 63 VCFDDFFPISQVRLWALQLIMVSTPSLLVVLHVAYHEGREKRHRK-KLYVSPGTMDG--- 118
Query: 124 PCALRARRARRCYLLSVALRLLAELTFLGGQALLY-GFRVAPHFACAGPPCPHTVDCFVS 182
YL+S+ ++ E+ FL LY GF V C PCP+TVDCF+S
Sbjct: 119 -------GLWYAYLISLIVKTGFEIGFLVLFYKLYDGFSVPYLIKCDLKPCPNTVDCFIS 171
Query: 183 RPTEKTVFVLFYFAVGLLSALLSVAELGHLLWK 215
+PTEKT+F+LF L +L+ EL L+ K
Sbjct: 172 KPTEKTIFILFLVITSCLCIVLNFIELSFLVLK 204
>gi|54607056 connexin 31 [Homo sapiens]
Length = 270
Score = 135 bits (340), Expect = 4e-32
Identities = 84/262 (32%), Positives = 127/262 (48%), Gaps = 31/262 (11%)
Query: 3 EWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCR 62
+W L +LL V S GR+WL V+ +FR+LV V+ DEQ++F CNT QPGC
Sbjct: 2 DWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCT 61
Query: 63 QTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEAQC 122
CYD FP+S+ R W ++ ++ P +L +++ +R +E + QC
Sbjct: 62 NVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGD--------QC 113
Query: 123 APCALRARRARR----CYLLSVALRLLAELTFLG-GQALLYGFRVAPHFACAG-PPCPHT 176
A A + YL S+ +L+ E FL L +GF + CA PCP+
Sbjct: 114 AKLYDNAGKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNI 173
Query: 177 VDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHL--------LWKGRPRAG------- 221
VDC+++RPTEK +F F + +L++ EL +L L K +PR G
Sbjct: 174 VDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSA 233
Query: 222 ERDNRCNRAHE--EAQKLLPPP 241
R + C H+ EA ++ P P
Sbjct: 234 SRASTCRCHHKLVEAGEVDPDP 255
>gi|13128960 connexin 31 [Homo sapiens]
Length = 270
Score = 135 bits (340), Expect = 4e-32
Identities = 84/262 (32%), Positives = 127/262 (48%), Gaps = 31/262 (11%)
Query: 3 EWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCR 62
+W L +LL V S GR+WL V+ +FR+LV V+ DEQ++F CNT QPGC
Sbjct: 2 DWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCT 61
Query: 63 QTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEAQC 122
CYD FP+S+ R W ++ ++ P +L +++ +R +E + QC
Sbjct: 62 NVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGD--------QC 113
Query: 123 APCALRARRARR----CYLLSVALRLLAELTFLG-GQALLYGFRVAPHFACAG-PPCPHT 176
A A + YL S+ +L+ E FL L +GF + CA PCP+
Sbjct: 114 AKLYDNAGKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNI 173
Query: 177 VDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHL--------LWKGRPRAG------- 221
VDC+++RPTEK +F F + +L++ EL +L L K +PR G
Sbjct: 174 VDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSA 233
Query: 222 ERDNRCNRAHE--EAQKLLPPP 241
R + C H+ EA ++ P P
Sbjct: 234 SRASTCRCHHKLVEAGEVDPDP 255
>gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens]
Length = 321
Score = 130 bits (328), Expect = 1e-30
Identities = 57/104 (54%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 1 MGEWAFLGSLLDA-VQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQP 59
MGEW L LL+A VQ S ++GR+ L V++IFRIL++A VG V++DEQ FVCNTLQP
Sbjct: 1 MGEWTILERLLEAAVQQHSTMIGRILLTVVVIFRILIVAIVGETVYDDEQTMFVCNTLQP 60
Query: 60 GCRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKE 103
GC Q CYDRAFP+SH R+W+F I+++ P + F+ YS+H++ K+
Sbjct: 61 GCNQACYDRAFPISHIRYWVFQIIMVCTPSLCFITYSVHQSAKQ 104
Score = 82.0 bits (201), Expect = 6e-16
Identities = 40/82 (48%), Positives = 53/82 (64%)
Query: 134 RCYLLSVALRLLAELTFLGGQALLYGFRVAPHFACAGPPCPHTVDCFVSRPTEKTVFVLF 193
R Y++ V R E+ FL GQ LYGF V + C PC V+C+VSRPTEKTVF++F
Sbjct: 197 RFYIIQVVFRNALEIGFLVGQYFLYGFSVPGLYECNRYPCIKEVECYVSRPTEKTVFLVF 256
Query: 194 YFAVGLLSALLSVAELGHLLWK 215
FAV + +L++AEL HL W+
Sbjct: 257 MFAVSGICVVLNLAELNHLGWR 278
>gi|10835079 gap junction protein, beta 5, 31.1kDa [Homo sapiens]
Length = 273
Score = 129 bits (325), Expect = 2e-30
Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 13/217 (5%)
Query: 4 WAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQ 63
W+ LL V S GR+WL ++ IFR+LV V+ D+ ++F CNT QPGC
Sbjct: 3 WSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGCSN 62
Query: 64 TCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEAQCA 123
C+D FPVSH R W ++L++ P +L V++ +R +E EA + + L
Sbjct: 63 VCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRL------ 116
Query: 124 PCALRARRARR----CYLLSVALRLLAELTFLGGQALLY-GFRVAPHFACAGPPCPHTVD 178
L + R Y+ S+ + ++ FL Y + + P C PCP+ VD
Sbjct: 117 --YLNPGKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVD 174
Query: 179 CFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWK 215
CF+S+P+EK +F LF A + LL++ EL +L+ K
Sbjct: 175 CFISKPSEKNIFTLFMVATAAICILLNLVELIYLVSK 211
>gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens]
Length = 279
Score = 129 bits (323), Expect = 4e-30
Identities = 86/252 (34%), Positives = 127/252 (50%), Gaps = 25/252 (9%)
Query: 6 FLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQTC 65
FL LL +S VGRL L V+L FR+++LA G V+ DEQ EFVC+T QPGC+ C
Sbjct: 5 FLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAAC 64
Query: 66 YDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRA---------GKEAGGAEAAAQCAPG 116
+D P+S RFW+F ++L++ P L++ ++++ GKE E Q G
Sbjct: 65 FDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKE---EETLIQGREG 121
Query: 117 LPEAQCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLYGFRVAPHFACAGPPCPHT 176
+ A + R Y+ + RL+ E LG Q LYGF++ FAC PC +
Sbjct: 122 NTDVPGA----GSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGS 177
Query: 177 VDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHL-------LWKGRPRAGE--RDNRC 227
+ C +SRP+EKT+F+ F V L + EL L WK + + + +
Sbjct: 178 ITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKYFLTSES 237
Query: 228 NRAHEEAQKLLP 239
R H++A LP
Sbjct: 238 TRRHKKATDSLP 249
>gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens]
Length = 439
Score = 111 bits (278), Expect = 7e-25
Identities = 45/99 (45%), Positives = 69/99 (69%)
Query: 4 WAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQ 63
W+FL LL+ + S VG++WL V+++FRI++ A G A++ DEQ +F CNT QPGC
Sbjct: 6 WSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQPGCDN 65
Query: 64 TCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGK 102
CYD P+SH RFW+F I+++S P V+++ Y++HR +
Sbjct: 66 VCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLAR 104
Score = 105 bits (262), Expect = 5e-23
Identities = 65/164 (39%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 103 EAGGAEAAAQCAPGLPEAQCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLYGFRV 162
+A GA+ A PG ++ R Y+ + R E+ FL GQ LLYGF V
Sbjct: 180 KAVGADGKAAGTPGPTGQHDGRRRIQREGLMRVYVAQLVARAAFEVAFLVGQYLLYGFEV 239
Query: 163 APHFACAGPPCPHTVDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLLWKGRPRAGE 222
P F C+ PCPH VDCFVSRPTEKTVF+L + V L LL++ E+ H L G +
Sbjct: 240 RPFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAH-LGLGSAQDAV 298
Query: 223 RDNRCNRAHEEAQKLLPPPPPPPPPPALPSRRPGPEPCAPPAYA 266
R R A P P P PPP A P+ G PP Y+
Sbjct: 299 RGRRGPPAS------APAPAPRPPPCAFPAAAAG--LACPPDYS 334
>gi|169171704 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 86.7 bits (213), Expect = 2e-17
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 10 LLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQTCYDRA 69
LL S VGRL V+L FR+++LA G V+ DEQ EFVC+T QPGC+ C+D
Sbjct: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
Query: 70 FPVSHYRFWLFHILLLSAPPVLFVVYSMHRAG 101
P+S RFW+F ++L++ P VL++ Y+ +G
Sbjct: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESG 119
>gi|169171845 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 86.7 bits (213), Expect = 2e-17
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 10 LLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQTCYDRA 69
LL S VGRL V+L FR+++LA G V+ DEQ EFVC+T QPGC+ C+D
Sbjct: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
Query: 70 FPVSHYRFWLFHILLLSAPPVLFVVYSMHRAG 101
P+S RFW+F ++L++ P VL++ Y+ +G
Sbjct: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESG 119
>gi|169171183 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 86.7 bits (213), Expect = 2e-17
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 10 LLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQTCYDRA 69
LL S VGRL V+L FR+++LA G V+ DEQ EFVC+T QPGC+ C+D
Sbjct: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
Query: 70 FPVSHYRFWLFHILLLSAPPVLFVVYSMHRAG 101
P+S RFW+F ++L++ P VL++ Y+ +G
Sbjct: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESG 119
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.141 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,570,862
Number of Sequences: 37866
Number of extensions: 991423
Number of successful extensions: 36590
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 589
Number of HSP's that attempted gapping in prelim test: 15524
Number of HSP's gapped (non-prelim): 11870
length of query: 294
length of database: 18,247,518
effective HSP length: 101
effective length of query: 193
effective length of database: 14,423,052
effective search space: 2783649036
effective search space used: 2783649036
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.