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Search of human proteins with 148839376
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens]
(590 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens] 1212 0.0
gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens] 1020 0.0
gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens] 322 8e-88
gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens] 138 2e-32
gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 66 1e-10
gi|28559069 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 66 1e-10
gi|77176455 DNA cytosine methyltransferase 3 alpha isoform b [Ho... 66 1e-10
gi|110349719 titin isoform N2-A [Homo sapiens] 62 1e-09
gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [H... 62 1e-09
gi|28559063 DNA cytosine-5 methyltransferase 3 beta isoform 3 [H... 62 1e-09
gi|28559061 DNA cytosine-5 methyltransferase 3 beta isoform 2 [H... 62 1e-09
gi|5901940 DNA cytosine-5 methyltransferase 3 beta isoform 1 [Ho... 62 1e-09
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens] 54 4e-07
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens] 54 4e-07
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens] 54 4e-07
gi|163965366 nascent polypeptide-associated complex alpha subuni... 54 4e-07
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 53 9e-07
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 53 9e-07
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 53 9e-07
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 52 2e-06
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 51 3e-06
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 51 3e-06
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 49 2e-05
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 49 2e-05
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 48 2e-05
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 48 2e-05
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 48 2e-05
gi|41281612 zinc finger protein 828 [Homo sapiens] 48 2e-05
gi|150417989 cyclin K isoform 1 [Homo sapiens] 48 2e-05
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 48 3e-05
>gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens]
Length = 590
Score = 1212 bits (3137), Expect = 0.0
Identities = 590/590 (100%), Positives = 590/590 (100%)
Query: 1 MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDES 60
MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDES
Sbjct: 1 MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDES 60
Query: 61 PVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPY 120
PVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPY
Sbjct: 61 PVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPY 120
Query: 121 FEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEK 180
FEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEK
Sbjct: 121 FEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEK 180
Query: 181 CKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREED 240
CKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREED
Sbjct: 181 CKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREED 240
Query: 241 RAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE 300
RAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE
Sbjct: 241 RAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE 300
Query: 301 SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGY 360
SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGY
Sbjct: 301 SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGY 360
Query: 361 LRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASE 420
LRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASE
Sbjct: 361 LRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASE 420
Query: 421 SACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQSVSEC 480
SACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQSVSEC
Sbjct: 421 SACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQSVSEC 480
Query: 481 ITEDGRTVAVGDIVWGKIHGFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLS 540
ITEDGRTVAVGDIVWGKIHGFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLS
Sbjct: 481 ITEDGRTVAVGDIVWGKIHGFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLS 540
Query: 541 ISKLSPFSEFFKLRFNRKKKGMYRKAITEAANAARHVAPEIRELLTQFET 590
ISKLSPFSEFFKLRFNRKKKGMYRKAITEAANAARHVAPEIRELLTQFET
Sbjct: 541 ISKLSPFSEFFKLRFNRKKKGMYRKAITEAANAARHVAPEIRELLTQFET 590
>gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens]
Length = 499
Score = 1020 bits (2638), Expect = 0.0
Identities = 496/496 (100%), Positives = 496/496 (100%)
Query: 1 MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDES 60
MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDES
Sbjct: 1 MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDES 60
Query: 61 PVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPY 120
PVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPY
Sbjct: 61 PVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPY 120
Query: 121 FEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEK 180
FEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEK
Sbjct: 121 FEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEK 180
Query: 181 CKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREED 240
CKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREED
Sbjct: 181 CKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREED 240
Query: 241 RAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE 300
RAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE
Sbjct: 241 RAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE 300
Query: 301 SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGY 360
SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGY
Sbjct: 301 SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGY 360
Query: 361 LRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASE 420
LRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASE
Sbjct: 361 LRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASE 420
Query: 421 SACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQSVSEC 480
SACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQSVSEC
Sbjct: 421 SACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQSVSEC 480
Query: 481 ITEDGRTVAVGDIVWG 496
ITEDGRTVAVGDIVWG
Sbjct: 481 ITEDGRTVAVGDIVWG 496
>gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens]
Length = 755
Score = 322 bits (824), Expect = 8e-88
Identities = 208/620 (33%), Positives = 338/620 (54%), Gaps = 58/620 (9%)
Query: 6 GCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDESPVNDS 65
G + V ++ ++ ALVV+ GE+ F+G+L+D +K+ G G+P + + D
Sbjct: 159 GSEVRVTLDHIIEDALVVSFRFGEKLFSGVLMDLSKRFGPHGIP----VTVFPKREYKDK 214
Query: 66 HGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAP 125
P + + Q G+ A G P + + P P P L + P P + EGAP
Sbjct: 215 PEAMPLQSNT--FQEGTEVKCEANGAVPDDPS-PVPHPELSLAESLWTSKPPPLFHEGAP 271
Query: 126 FPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTL 185
+P PL++RDTY +PQPPPR IKR +R++ R I++ I+LRPRQVLC+KCK+++
Sbjct: 272 YPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTS--IMNAIKLRPRQVLCDKCKNSV 329
Query: 186 SPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAE 245
A + R GS + K E+ + + ++ K + + + + E
Sbjct: 330 ----------VAEKKEIRKGSSAT-DSSKYEDKKRRNESVTTVNKKLKTDHKVDGKNQNE 378
Query: 246 QVPRSPVIKISYSTPQGKGEVVKIPSRVHGS---LEPFRPQQAPQDDGSQDPEVLD---- 298
R+ V+K+S + +G VVK+ ++ + S L + Q+ D ++ EVL
Sbjct: 379 SQKRNAVVKVS-NIAHSRGRVVKVSAQANTSKAQLSTKKVLQSKNMDHAKAREVLKIAKE 437
Query: 299 --RESRDRPSCAPSASIPKLKLTRPV--PAGADLPPPKIRLKPHRLGDSEHEPVYRAELV 354
++ ++ S + +A K+ TR P+ LPP ++RLKP R + E++ + L
Sbjct: 438 KAQKKQNETSTSKNAH-SKVHFTRRYQNPSSGSLPP-RVRLKPQRYRNEENDSSLKTGLE 495
Query: 355 GELNGYLRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSC----------------PQ-- 396
+G + + C + G A + S + + S PQ
Sbjct: 496 KMRSGKMAPKPQSRCTSTRSAGEAPSENQSPSKGPEEASSEVQDTNEVHVPGDQDEPQTL 555
Query: 397 GPQG-REGLAFLVSCPEGRADCASESACSSDSLDEARSSGSEGTPADTGDLSPGH----- 450
G +G + ++ ++ + ++D +S S CS DS D+ +SS SE + +++ D PG
Sbjct: 556 GKKGSKNNISVYMTLNQKKSDSSSASVCSIDSTDDLKSSNSECSSSESFDFPPGSMHAPS 615
Query: 451 GASAPSVSREARQTVPPLTVRLHTQSVSECITEDGRTVAVGDIVWGKIHGFPWWPARVLD 510
+S S S+E ++ L +++ +++VS+C+T DGRT+ VGDIVW KI+GFPWWPAR+L
Sbjct: 616 TSSTSSSSKEEKKLSNSLKMKVFSKNVSKCVTPDGRTICVGDIVWAKIYGFPWWPARILT 675
Query: 511 ISLGQKEDGEPSWREAKVSWFGSPTTSFLSISKLSPFSEFFKLRFNRKKKGMYRKAITEA 570
I++ +K++G +EA++SWFGSPTTSFL++S+LSPF E F+ RFN+K+KG+YRKAITEA
Sbjct: 676 ITVSRKDNGLLVRQEARISWFGSPTTSFLALSQLSPFLENFQSRFNKKRKGLYRKAITEA 735
Query: 571 ANAARHVAPEIRELLTQFET 590
A AA+ + PE+R LLTQFET
Sbjct: 736 AKAAKQLTPEVRALLTQFET 755
>gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens]
Length = 560
Score = 138 bits (347), Expect = 2e-32
Identities = 105/382 (27%), Positives = 181/382 (47%), Gaps = 32/382 (8%)
Query: 6 GCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDESPVNDS 65
G + V ++ ++ ALVV+ GE+ F+G+L+D +K+ G G+P + + D
Sbjct: 159 GSEVRVTLDHIIEDALVVSFRFGEKLFSGVLMDLSKRFGPHGIP----VTVFPKREYKDK 214
Query: 66 HGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAP 125
P + + Q G+ A G P + + P P P L + P P + EGAP
Sbjct: 215 PEAMPLQSNT--FQEGTEVKCEANGAVPDDPS-PVPHPELSLAESLWTSKPPPLFHEGAP 271
Query: 126 FPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTL 185
+P PL++RDTY +PQPPPR IKR +R++ R I++ I+LRPRQVLC+KCK+++
Sbjct: 272 YPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTS--IMNAIKLRPRQVLCDKCKNSV 329
Query: 186 SPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAE 245
A + R GS + K E+ + + ++ K + + + + E
Sbjct: 330 ----------VAEKKEIRKGSSA-TDSSKYEDKKRRNESVTTVNKKLKTDHKVDGKNQNE 378
Query: 246 QVPRSPVIKISYSTPQGKGEVVKIPSRVHGS---LEPFRPQQAPQDDGSQDPEVL----- 297
R+ V+K+S + +G VVK+ ++ + S L + Q+ D ++ EVL
Sbjct: 379 SQKRNAVVKVS-NIAHSRGRVVKVSAQANTSKAQLSTKKVLQSKNMDHAKAREVLKIAKE 437
Query: 298 DRESRDRPSCAPSASIPKLKLTRPV--PAGADLPPPKIRLKPHRLGDSEHEPVYRAELVG 355
+ + + + K+ TR P+ L PP++RLKP R + E++ + L
Sbjct: 438 KAQKKQNETSTSKNAHSKVHFTRRYQNPSSGSL-PPRVRLKPQRYRNEENDSSLKTGLEK 496
Query: 356 ELNGYLRDSSPAPCADGPAGGL 377
+G + + C + GL
Sbjct: 497 MRSGKMAPKPQSRCTSTRSAGL 518
>gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 65.9 bits (159), Expect = 1e-10
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 483 EDGRTVAVGDIVWGKIHGFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLSIS 542
EDGR +G++VWGK+ GF WWP R++ + + R V WFG S + +
Sbjct: 285 EDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTR--WVMWFGDGKFSVVCVE 342
Query: 543 KLSPFSEFFKL--RFNRKKKGMYRKAITEAANAA 574
KL P S F + K+ MYRKAI E A
Sbjct: 343 KLMPLSSFCSAFHQATYNKQPMYRKAIYEVLQVA 376
>gi|28559069 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 65.9 bits (159), Expect = 1e-10
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 483 EDGRTVAVGDIVWGKIHGFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLSIS 542
EDGR +G++VWGK+ GF WWP R++ + + R V WFG S + +
Sbjct: 285 EDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTR--WVMWFGDGKFSVVCVE 342
Query: 543 KLSPFSEFFKL--RFNRKKKGMYRKAITEAANAA 574
KL P S F + K+ MYRKAI E A
Sbjct: 343 KLMPLSSFCSAFHQATYNKQPMYRKAIYEVLQVA 376
>gi|77176455 DNA cytosine methyltransferase 3 alpha isoform b [Homo
sapiens]
Length = 723
Score = 65.9 bits (159), Expect = 1e-10
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 483 EDGRTVAVGDIVWGKIHGFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLSIS 542
EDGR +G++VWGK+ GF WWP R++ + + R V WFG S + +
Sbjct: 96 EDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTR--WVMWFGDGKFSVVCVE 153
Query: 543 KLSPFSEFFKL--RFNRKKKGMYRKAITEAANAA 574
KL P S F + K+ MYRKAI E A
Sbjct: 154 KLMPLSSFCSAFHQATYNKQPMYRKAIYEVLQVA 187
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 62.4 bits (150), Expect = 1e-09
Identities = 85/359 (23%), Positives = 131/359 (36%), Gaps = 73/359 (20%)
Query: 50 PLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPP----PARGVQPPETTRPEPPPPL 105
P A +P+V + V + R PEE ++ PP P + V P +PE PPP
Sbjct: 10465 PPAKVPEVPKKIVVEEKVRVPEEPRVPPTKVPEVLPPKEVVPEKKVPVPPAKKPEAPPPK 10524
Query: 106 VPPLPAGSLP----PYPPYFEGAPFPHPLWLRDTYKLWVPQ-------------PPPRTI 148
VP P +P P PP P P + + K VP+ PPP
Sbjct: 10525 VPEAPKEVVPEKKVPVPP--PKKPEVPPTKVPEVPKAAVPEKKVPEAIPPKPESPPPEVP 10582
Query: 149 KRTRRRLSRNRDPG------RLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPA----AP 198
+ + + + P + + P++V+ EK K + PP+ PP P
Sbjct: 10583 EAPKEVVPEKKVPAAPPKKPEVTPVKVPEAPKEVVPEK-KVPVPPPKKPEVPPTKVPEVP 10641
Query: 199 RARRRLGSGPDRELRKPEEP---------------------ENGEPTAAATARRSKRERR 237
+ P+ KPE P E EP A ++
Sbjct: 10642 KVAVPEKKVPEAIPPKPESPPPEVFEEPEEVALEEPPAEVVEEPEPAAPPQVTVPPKKPV 10701
Query: 238 EEDRAPA--EQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPE 295
E +APA + P P +K+ P+ EVV P + + P +P+ P E
Sbjct: 10702 PEKKAPAVVAKKPELPPVKV----PEVPKEVV--PEKKVPLVVPKKPEAPPAKVPEVPKE 10755
Query: 296 VLDRESRDRPSC--APSASIPKL--------KLTRPVPAGADLPPPKIRLKPHRLGDSE 344
V+ + P P A +P++ K PVP A+ PPP++ +P + E
Sbjct: 10756 VVPEKKVAVPKKPEVPPAKVPEVPKKPVLEEKPAVPVPERAESPPPEVYEEPEEIAPEE 10814
Score = 53.9 bits (128), Expect = 4e-07
Identities = 73/316 (23%), Positives = 122/316 (38%), Gaps = 37/316 (11%)
Query: 50 PLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQP--PETTRPEPPPPLVP 107
P A +P+V + V + P++ + ++ P +P P R E PPP V
Sbjct: 10745 PPAKVPEVPKEVVPEKKVAVPKKPEVPPAKVPEVPKKPVLEEKPAVPVPERAESPPPEVY 10804
Query: 108 PLPAGSLP----------PYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSR 157
P P P P E P P + + K +P+ IK+ +
Sbjct: 10805 EEPEEIAPEEEIAPEEEKPVPVAEEEEPEVPPPAVPEEPKKIIPEKKVPVIKKPEAPPPK 10864
Query: 158 NRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARR--RLGSGPDREL-RK 214
+P ++I +L+PR PP P PP + +L + P +++ K
Sbjct: 10865 EPEPEKVIEKP-KLKPR------------PPPPPPAPPKEDVKEKIFQLKAIPKKKVPEK 10911
Query: 215 PEEPENGEPTAAATARRSKRERR---EEDRAPAEQVPRSPVIKISYSTPQGKGEVVKIPS 271
P+ PE E T K+ R+ E P E+V V++ + K E P
Sbjct: 10912 PQVPEKVELTPLKVPGGEKKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVE----PK 10967
Query: 272 RVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAGADLPPP 331
++ +P P+ P ++ EV R+R P+ +P++K P+PA P P
Sbjct: 10968 KLEKVKKPAVPEPPPPKP-VEEVEVPTVTKRERKIPEPT-KVPEIKPAIPLPAPEPKPKP 11025
Query: 332 KIRLKPHRLGDSEHEP 347
+ +K + E EP
Sbjct: 11026 EAEVKTIKPPPVEPEP 11041
Score = 46.2 bits (108), Expect = 8e-05
Identities = 75/341 (21%), Positives = 127/341 (37%), Gaps = 55/341 (16%)
Query: 49 PPLAPLPQVDESPVNDSHGRAP-----EEGDAEVMQLGSSSPPPARGVQPPETTRPEPPP 103
PP A +P+V + PV + P E A+V ++ P P + V P + E PP
Sbjct: 9999 PPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVPEV-PKKPVPEKKVPVPAPKKVEAPP 10057
Query: 104 PLVPPLPAGSLP------PYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSR 157
VP +P +P P P E P P K P P P + + L
Sbjct: 10058 AKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVP-------KKREPVPVPVALPQEEEVLFE 10110
Query: 158 NR-DPGRLIL---STIRLRPRQVLCEK----CKSTLSPPEASPGPPAAPRARRRLGSGPD 209
P +L + +VL E+ + PPE PP P+
Sbjct: 10111 EEIVPEEEVLPEEEEVLPEEEEVLPEEEEVLPEEEEIPPEEEEVPPEEEYVPEEEEFVPE 10170
Query: 210 RELRKPEEPENGEPTAAATARRSKRERR----EEDRAPAEQVPRSP--VIKISYSTPQGK 263
E+ +P+ P ++ E++ +++ AP +VP P V + P+ +
Sbjct: 10171 EEVLPEVKPKVPVPAPVPEIKKKVTEKKVVIPKKEEAPPAKVPEVPKKVEEKRIILPK-E 10229
Query: 264 GEVVKIPSRVHGSLEPFRPQQAPQDDGSQD----------PEVLDRESRDRPSCAP---- 309
EV+ + EP ++ P++ S + PEV+ + + P+ P
Sbjct: 10230 EEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPRVPEVIKKAVPEAPTPVPKKVE 10289
Query: 310 ------SASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSE 344
S IP+ K+ PV + PP K+ P ++ + +
Sbjct: 10290 APPAKVSKKIPEEKVPVPVQK-KEAPPAKVPEVPKKVPEKK 10329
Score = 45.4 bits (106), Expect = 1e-04
Identities = 70/308 (22%), Positives = 116/308 (37%), Gaps = 49/308 (15%)
Query: 50 PLAP--LPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPE-----TTRPEPP 102
P AP +P+V + PV + P E + P +GV E T R E P
Sbjct: 9338 PAAPPKVPEVPKKPVPEEKIPVPVAKKKEAPP--AKVPEVQKGVVTEEKITIVTQREESP 9395
Query: 103 PPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPG 162
PP VP +P +P E P P + VP PPP+ ++ + +
Sbjct: 9396 PPAVPEIPKKKVPE-----ERKPVPRK-------EEEVP-PPPKVPALPKKPVPEEKVAV 9442
Query: 163 RLILSTIRLRPRQVLCEKC----KSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEP 218
+ ++ PR + +K K ++ + S P R S + EE
Sbjct: 9443 PVPVAKKAPPPRAEVSKKTVVEEKRFVAEEKLSFAVPQRVEVTRHEVSAEEEWSYSEEE- 9501
Query: 219 ENGEPTAAATARRSKRERREEDRAPAEQVPRSP---VI--KISYSTPQGKGEVVKIPSRV 273
E + + R +RE EE +V P V+ K+ + + + E ++ R
Sbjct: 9502 ---EGVSISVYREEEREEEEEAEVTEYEVMEEPEEYVVEEKLHIISKRVEAEPAEVTERQ 9558
Query: 274 HGS--LEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAGADLPPP 331
L+P P + + ++ PE AP +P+ K+ PVP +PPP
Sbjct: 9559 EKKIVLKPKIPAKIEEPPPAKVPE------------APKKIVPEKKVPAPVPKKEKVPPP 9606
Query: 332 KIRLKPHR 339
K+ +P +
Sbjct: 9607 KVPEEPKK 9614
Score = 37.0 bits (84), Expect = 0.051
Identities = 59/282 (20%), Positives = 98/282 (34%), Gaps = 36/282 (12%)
Query: 85 PPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPP 144
PPPA+ + P+ PE P P PP P P P K+ P P
Sbjct: 9575 PPPAKVPEAPKKIVPEKKVPAPVPKKEKVPPPKVPEEPKKPVPEKKVPPKVIKMEEPLPA 9634
Query: 145 PRTIKRTRRRLSRNRDPGRLILST---------IRLRPRQVLCEKCKSTLSPPEASPGPP 195
K T R + ++ L+ T + P++ + E+ L P P
Sbjct: 9635 ----KVTERHMQITQEEKVLVAVTKKEAPPKARVPEEPKRAVPEEKVLKLKPKREEEPPA 9690
Query: 196 AAPRARRRLGSG-------------PDRELRKPEEPENG---EPTAAATARRSKRERREE 239
R+R+ P +E+ EE E E A + R + E EE
Sbjct: 9691 KVTEFRKRVVKEEKVSIEAPKREPQPIKEVTIMEEKERAYTLEEEAVSVQREEEYEEYEE 9750
Query: 240 -DRAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLD 298
D E+ P + + E + EP +P P ++P +
Sbjct: 9751 YDYKEFEEY--EPTEEYDQYEEYEEREYERYEEHEEYITEPEKP--IPVKPVPEEP--VP 9804
Query: 299 RESRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRL 340
+ + P+ ++P+ K+ P+P PPPK+ +P ++
Sbjct: 9805 TKPKAPPAKVLKKAVPEEKVPVPIPKKLKPPPPKVPEEPKKV 9846
Score = 35.8 bits (81), Expect = 0.11
Identities = 70/299 (23%), Positives = 108/299 (36%), Gaps = 59/299 (19%)
Query: 97 TRPEPPPPL--VPPLPAGSLPPYPPYF--------EGAPFPHPLWLRDTYKLWVPQPP-- 144
T PE P P+ VP P + P PP E P P P L+ P PP
Sbjct: 9787 TEPEKPIPVKPVPEEPVPTKPKAPPAKVLKKAVPEEKVPVPIPKKLK-------PPPPKV 9839
Query: 145 ---PRTIKRTRRRLS---RNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAP 198
P+ + + R+S R ++ + + ++P++V+ E+ K + E +P P P
Sbjct: 9840 PEEPKKVFEEKIRISITKREKEQVTEPAAKVPMKPKRVVAEE-KVPVPRKEVAP-PVRVP 9897
Query: 199 RARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERRE----EDRAPA-----EQVPR 249
+ L P+ + E + E E E E+ P +VPR
Sbjct: 9898 EVPKELE--PEEVAFEEEVVTHVEEYLVEEEEEYIHEEEEFITEEEVVPVIPVKVPEVPR 9955
Query: 250 SPVIKISYSTPQGKG---------EVVKIPSRVHGSLEPFR----PQQAPQDDGSQDPEV 296
PV + P K EV K P L P + P + P+ PE
Sbjct: 9956 KPVPEEKKPVPVPKKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEE 10015
Query: 297 LDRESRDRPSCAPSASIPKL--------KLTRPVPAGADLPPPKIRLKPHRLGDSEHEP 347
+ AP A +P++ K+ P P + PP K+ P +L E +P
Sbjct: 10016 KVPVPVPKKVEAPPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKP 10074
Score = 33.5 bits (75), Expect = 0.56
Identities = 55/281 (19%), Positives = 93/281 (33%), Gaps = 43/281 (15%)
Query: 85 PPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQ-- 142
P P P + E PP VP +P P P P + + K VP+
Sbjct: 9957 PVPEEKKPVPVPKKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEK 10016
Query: 143 ---PPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPR 199
P P+ ++ ++ P++ + EK +P + P P
Sbjct: 10017 VPVPVPKKVEAPPAKVPE--------------VPKKPVPEKKVPVPAPKKVEAPPAKVPE 10062
Query: 200 ARRRLGSGPDR--------ELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSP 251
++L + E P+ P+ EP A + E E+ E VP
Sbjct: 10063 VPKKLIPEEKKPTPVPKKVEAPPPKVPKKREPVPVPVALPQEEEVLFEE----EIVPEEE 10118
Query: 252 VIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQ---APQDDGSQDPEVLDRESRDRPSCA 308
V+ + EV+ V E P++ P+++ + E E P
Sbjct: 10119 VLPEEEEVLPEEEEVLPEEEEVLPEEEEIPPEEEEVPPEEEYVPEEEEFVPEEEVLPEVK 10178
Query: 309 PSASIP------KLKLTRP---VPAGADLPPPKIRLKPHRL 340
P +P K K+T +P + PP K+ P ++
Sbjct: 10179 PKVPVPAPVPEIKKKVTEKKVVIPKKEEAPPAKVPEVPKKV 10219
Score = 33.5 bits (75), Expect = 0.56
Identities = 47/181 (25%), Positives = 67/181 (37%), Gaps = 34/181 (18%)
Query: 187 PPEASPGPPAAPRARRRLGSGPDRELRKPEE------PENGEPTAAATARRSKRERREED 240
P E P P P+ + + +KPEE P+ +P A K+
Sbjct: 9959 PEEKKPVP--VPKKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKP----- 10011
Query: 241 RAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE 300
P E+VP PV K + P EV K P V P + + ++ PEV
Sbjct: 10012 -VPEEKVP-VPVPKKVEAPPAKVPEVPKKP--VPEKKVPVPAPKKVEAPPAKVPEV---- 10063
Query: 301 SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLG-----DSEHEPVYRAELVG 355
P IP+ K PVP + PPPK+ K + E E ++ E+V
Sbjct: 10064 --------PKKLIPEEKKPTPVPKKVEAPPPKVPKKREPVPVPVALPQEEEVLFEEEIVP 10115
Query: 356 E 356
E
Sbjct: 10116 E 10116
Score = 33.1 bits (74), Expect = 0.73
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 24/140 (17%)
Query: 209 DRELRKPEEPENGEPTAAATARRSKRERREED-RAPAEQVPRSPVIKISYSTPQGKGEVV 267
+ ++R PEEP PT K E+ P + P +P K+ P+ EVV
Sbjct: 10479 EEKVRVPEEPRV-PPTKVPEVLPPKEVVPEKKVPVPPAKKPEAPPPKV----PEAPKEVV 10533
Query: 268 KIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAGAD 327
P + P P + P+ ++ PEV P A++P+ K+ +P +
Sbjct: 10534 --PEKK----VPVPPPKKPEVPPTKVPEV------------PKAAVPEKKVPEAIPPKPE 10575
Query: 328 LPPPKIRLKPHRLGDSEHEP 347
PPP++ P + + P
Sbjct: 10576 SPPPEVPEAPKEVVPEKKVP 10595
Score = 31.6 bits (70), Expect = 2.1
Identities = 40/173 (23%), Positives = 64/173 (36%), Gaps = 42/173 (24%)
Query: 85 PPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPP 144
P P P + EPP P VP +P +P E P P P P P
Sbjct: 9295 PAPEEVAPVPIPKKVEPPAPKVPEVPKKPVPE-----EKKPVPVP--------KKEPAAP 9341
Query: 145 PRTIKRTRRRLSRNRDPGRLIL------STIRLRPRQVLCEKCKSTLSPPEASPGPPAAP 198
P+ + ++ + + P + + + + V+ E+ + ++ E SP PPA P
Sbjct: 9342 PKVPEVPKKPVPEEKIPVPVAKKKEAPPAKVPEVQKGVVTEEKITIVTQREESP-PPAVP 9400
Query: 199 RARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSP 251
E+ K + PE +P R+EE+ P +VP P
Sbjct: 9401 ------------EIPKKKVPEERKPV----------PRKEEEVPPPPKVPALP 9431
Score = 31.6 bits (70), Expect = 2.1
Identities = 33/125 (26%), Positives = 44/125 (35%), Gaps = 18/125 (14%)
Query: 178 CEKCKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERR 237
C+ K + P PGPP P+ R G P G P E+R
Sbjct: 15585 CKSDKVVIQDPYRLPGPPGKPKVLART-KGSMLVSWTPPLDNGGSPITGYWL-----EKR 15638
Query: 238 EEDRAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQ------APQDDGS 291
EE +V R+P+ K+ KG +P + G FR P + S
Sbjct: 15639 EEGSPYWSRVSRAPITKVGL-----KGVEFNVPRLLEGVKYQFRAMAINAAGIGPPSEPS 15693
Query: 292 QDPEV 296
DPEV
Sbjct: 15694 -DPEV 15697
Score = 31.2 bits (69), Expect = 2.8
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Query: 215 PEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVH 274
P+ PE E +K R+E A +VP+ V++ P+ E P++V
Sbjct: 10440 PKGPEISEKIIPPKKPPTKVVPRKEPPAKVPEVPKKIVVEEKVRVPE---EPRVPPTKVP 10496
Query: 275 GSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAGADLPPPKI 333
L P + P+ P + AP +P+ K+ P P ++PP K+
Sbjct: 10497 EVLPP--KEVVPEKKVPVPPAKKPEAPPPKVPEAPKEVVPEKKVPVPPPKKPEVPPTKV 10553
Score = 29.6 bits (65), Expect = 8.1
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Query: 37 LDCTKKSGLFGLPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPET 96
L+ KK + PP P+ +V+ V + PE ++ P P +P
Sbjct: 10969 LEKVKKPAVPEPPPPKPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPAPEPKPKPEAE 11028
Query: 97 TRPEPPPPLVP-PLPAGSLPPYPPYFEGAPFPHPLWLRDTYK---LWVPQPPPRTIKRTR 152
+ PPP+ P P P + P + A P K VP+ P I+ R
Sbjct: 11029 VKTIKPPPVEPEPTPIAAPVTVPVVGKKAEAKAPKEEAAKPKGPIKGVPKKTPSPIEAER 11088
Query: 153 RRL 155
R+L
Sbjct: 11089 RKL 11091
>gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [Homo
sapiens]
Length = 845
Score = 62.4 bits (150), Expect = 1e-09
Identities = 73/260 (28%), Positives = 100/260 (38%), Gaps = 48/260 (18%)
Query: 349 YRAELVGELNGYLRDSSPAPC-----------ADGPAGGLADLSSGSSGEDDDFKSCPQG 397
Y +L G+ +G D S P ++ PA + +S SS E + P+
Sbjct: 78 YTQDLTGDGDGEDGDGSDTPVMPKLFRETRTRSESPAVRTRNNNSVSSRERH--RPSPRS 135
Query: 398 PQGREGLAFLVSCPEGRADCASESACSSDSLDEARSSGSEGTPAD-----------TGDL 446
+GR+G D + ++ SL R++ S GTP T D
Sbjct: 136 TRGRQG--------RNHVDESPVEFPATRSL-RRRATASAGTPWPSPPSSYLTIDLTDDT 186
Query: 447 SPGHGASAPSVSREARQTVPPLTVRLHTQSVS-------ECITEDGRTVAVGDIVWGKIH 499
HG S + AR + + V +DG+ +GD+VWGKI
Sbjct: 187 EDTHGTPQSSSTPYARLAQDSQQGGMESPQVEADSGDGDSSEYQDGKEFGIGDLVWGKIK 246
Query: 500 GFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLSISK---LSPFSEFFKL-RF 555
GF WWPA V+ K R V WFG S +S K L FS+ F L F
Sbjct: 247 GFSWWPAMVVSWKATSKRQAMSGMR--WVQWFGDGKFSEVSADKLVALGLFSQHFNLATF 304
Query: 556 NRKKKGMYRKAITEAANAAR 575
N K YRKA+ A AR
Sbjct: 305 N--KLVSYRKAMYHALEKAR 322
>gi|28559063 DNA cytosine-5 methyltransferase 3 beta isoform 3 [Homo
sapiens]
Length = 770
Score = 62.4 bits (150), Expect = 1e-09
Identities = 73/260 (28%), Positives = 100/260 (38%), Gaps = 48/260 (18%)
Query: 349 YRAELVGELNGYLRDSSPAPC-----------ADGPAGGLADLSSGSSGEDDDFKSCPQG 397
Y +L G+ +G D S P ++ PA + +S SS E + P+
Sbjct: 66 YTQDLTGDGDGEDGDGSDTPVMPKLFRETRTRSESPAVRTRNNNSVSSRERH--RPSPRS 123
Query: 398 PQGREGLAFLVSCPEGRADCASESACSSDSLDEARSSGSEGTPAD-----------TGDL 446
+GR+G D + ++ SL R++ S GTP T D
Sbjct: 124 TRGRQG--------RNHVDESPVEFPATRSL-RRRATASAGTPWPSPPSSYLTIDLTDDT 174
Query: 447 SPGHGASAPSVSREARQTVPPLTVRLHTQSVS-------ECITEDGRTVAVGDIVWGKIH 499
HG S + AR + + V +DG+ +GD+VWGKI
Sbjct: 175 EDTHGTPQSSSTPYARLAQDSQQGGMESPQVEADSGDGDSSEYQDGKEFGIGDLVWGKIK 234
Query: 500 GFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLSISK---LSPFSEFFKL-RF 555
GF WWPA V+ K R V WFG S +S K L FS+ F L F
Sbjct: 235 GFSWWPAMVVSWKATSKRQAMSGMR--WVQWFGDGKFSEVSADKLVALGLFSQHFNLATF 292
Query: 556 NRKKKGMYRKAITEAANAAR 575
N K YRKA+ A AR
Sbjct: 293 N--KLVSYRKAMYHALEKAR 310
>gi|28559061 DNA cytosine-5 methyltransferase 3 beta isoform 2 [Homo
sapiens]
Length = 833
Score = 62.4 bits (150), Expect = 1e-09
Identities = 73/260 (28%), Positives = 100/260 (38%), Gaps = 48/260 (18%)
Query: 349 YRAELVGELNGYLRDSSPAPC-----------ADGPAGGLADLSSGSSGEDDDFKSCPQG 397
Y +L G+ +G D S P ++ PA + +S SS E + P+
Sbjct: 66 YTQDLTGDGDGEDGDGSDTPVMPKLFRETRTRSESPAVRTRNNNSVSSRERH--RPSPRS 123
Query: 398 PQGREGLAFLVSCPEGRADCASESACSSDSLDEARSSGSEGTPAD-----------TGDL 446
+GR+G D + ++ SL R++ S GTP T D
Sbjct: 124 TRGRQG--------RNHVDESPVEFPATRSL-RRRATASAGTPWPSPPSSYLTIDLTDDT 174
Query: 447 SPGHGASAPSVSREARQTVPPLTVRLHTQSVS-------ECITEDGRTVAVGDIVWGKIH 499
HG S + AR + + V +DG+ +GD+VWGKI
Sbjct: 175 EDTHGTPQSSSTPYARLAQDSQQGGMESPQVEADSGDGDSSEYQDGKEFGIGDLVWGKIK 234
Query: 500 GFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLSISK---LSPFSEFFKL-RF 555
GF WWPA V+ K R V WFG S +S K L FS+ F L F
Sbjct: 235 GFSWWPAMVVSWKATSKRQAMSGMR--WVQWFGDGKFSEVSADKLVALGLFSQHFNLATF 292
Query: 556 NRKKKGMYRKAITEAANAAR 575
N K YRKA+ A AR
Sbjct: 293 N--KLVSYRKAMYHALEKAR 310
>gi|5901940 DNA cytosine-5 methyltransferase 3 beta isoform 1 [Homo
sapiens]
Length = 853
Score = 62.4 bits (150), Expect = 1e-09
Identities = 73/260 (28%), Positives = 100/260 (38%), Gaps = 48/260 (18%)
Query: 349 YRAELVGELNGYLRDSSPAPC-----------ADGPAGGLADLSSGSSGEDDDFKSCPQG 397
Y +L G+ +G D S P ++ PA + +S SS E + P+
Sbjct: 66 YTQDLTGDGDGEDGDGSDTPVMPKLFRETRTRSESPAVRTRNNNSVSSRERH--RPSPRS 123
Query: 398 PQGREGLAFLVSCPEGRADCASESACSSDSLDEARSSGSEGTPAD-----------TGDL 446
+GR+G D + ++ SL R++ S GTP T D
Sbjct: 124 TRGRQG--------RNHVDESPVEFPATRSL-RRRATASAGTPWPSPPSSYLTIDLTDDT 174
Query: 447 SPGHGASAPSVSREARQTVPPLTVRLHTQSVS-------ECITEDGRTVAVGDIVWGKIH 499
HG S + AR + + V +DG+ +GD+VWGKI
Sbjct: 175 EDTHGTPQSSSTPYARLAQDSQQGGMESPQVEADSGDGDSSEYQDGKEFGIGDLVWGKIK 234
Query: 500 GFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLSISK---LSPFSEFFKL-RF 555
GF WWPA V+ K R V WFG S +S K L FS+ F L F
Sbjct: 235 GFSWWPAMVVSWKATSKRQAMSGMR--WVQWFGDGKFSEVSADKLVALGLFSQHFNLATF 292
Query: 556 NRKKKGMYRKAITEAANAAR 575
N K YRKA+ A AR
Sbjct: 293 N--KLVSYRKAMYHALEKAR 310
>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 53.9 bits (128), Expect = 4e-07
Identities = 51/177 (28%), Positives = 66/177 (37%), Gaps = 28/177 (15%)
Query: 83 SSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQ 142
S+ PP+ P TT P PPP PP P PP PP P P P LR L +P
Sbjct: 16 SAQPPSSADTVPGTTYPPPPP---PPPPTPRPPPPPP----LPPPGPRLLR-ACSLLLPT 67
Query: 143 PPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPG--------- 193
P + RR SR+ GR+ C+ S L PP A P
Sbjct: 68 EPAPDLPPRRRSSSRSLARGRI-----------TQCQVAASPLVPPPAPPHCPRPLLCFL 116
Query: 194 PPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRS 250
P A P L + P + P G+ + A R +R +E+ PR+
Sbjct: 117 PAAGPAGLPPLRTSPCSGVTFAGRPRLGQESGQGVAARRRRALPRHPPLASERGPRT 173
>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 53.9 bits (128), Expect = 4e-07
Identities = 51/177 (28%), Positives = 66/177 (37%), Gaps = 28/177 (15%)
Query: 83 SSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQ 142
S+ PP+ P TT P PPP PP P PP PP P P P LR L +P
Sbjct: 16 SAQPPSSADTVPGTTYPPPPP---PPPPTPRPPPPPP----LPPPGPRLLR-ACSLLLPT 67
Query: 143 PPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPG--------- 193
P + RR SR+ GR+ C+ S L PP A P
Sbjct: 68 EPAPDLPPRRRSSSRSLARGRI-----------TQCQVAASPLVPPPAPPHCPRPLLCFL 116
Query: 194 PPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRS 250
P A P L + P + P G+ + A R +R +E+ PR+
Sbjct: 117 PAAGPAGLPPLRTSPCSGVTFAGRPRLGQESGQGVAARRRRALPRHPPLASERGPRT 173
>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 53.9 bits (128), Expect = 4e-07
Identities = 51/177 (28%), Positives = 66/177 (37%), Gaps = 28/177 (15%)
Query: 83 SSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQ 142
S+ PP+ P TT P PPP PP P PP PP P P P LR L +P
Sbjct: 16 SAQPPSSADTVPGTTYPPPPP---PPPPTPRPPPPPP----LPPPGPRLLR-ACSLLLPT 67
Query: 143 PPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPG--------- 193
P + RR SR+ GR+ C+ S L PP A P
Sbjct: 68 EPAPDLPPRRRSSSRSLARGRI-----------TQCQVAASPLVPPPAPPHCPRPLLCFL 116
Query: 194 PPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRS 250
P A P L + P + P G+ + A R +R +E+ PR+
Sbjct: 117 PAAGPAGLPPLRTSPCSGVTFAGRPRLGQESGQGVAARRRRALPRHPPLASERGPRT 173
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 53.9 bits (128), Expect = 4e-07
Identities = 102/420 (24%), Positives = 132/420 (31%), Gaps = 74/420 (17%)
Query: 48 LPPL-APLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLV 106
LPP P P V P P A + + SSSP AR P+ P P P
Sbjct: 880 LPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGI-PASPSPKG 938
Query: 107 PPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLIL 166
P P + PP P P P W P PP T S P
Sbjct: 939 APTPPAATPPSPKGGPATPSPK----------WAPTPPAATPP------SPKGGPA---- 978
Query: 167 STIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAA 226
K +PP A+P P A P P P+ G P A
Sbjct: 979 -----------TPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPK-GSPAAT 1026
Query: 227 ATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAP 286
+ + +P +P+ K + +TP +PS G P + AP
Sbjct: 1027 PFPKGASTPPAATPPSPKGSPAATPLPKGAPTTP-----AATLPSPKGGPATP-SLKGAP 1080
Query: 287 QDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAGADLPPPK--IRLKPHRLGDSE 344
+ P P P+ PK P+P A P PK + PH+
Sbjct: 1081 TPPAATPPS---------PKGGPATPSPK---GAPMPPAATPPSPKGGLATPPHK----- 1123
Query: 345 HEPVYRAELVGELNGYL-------RDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQG 397
P A G L ++PA P GGLA + G + P
Sbjct: 1124 GAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLA--TPPPKGAPTTPAATPPS 1181
Query: 398 PQGREGLAFLVSCPEGRADC-ASESACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPS 456
P+G GLA P+G A+ L G+ TPA T SP G + PS
Sbjct: 1182 PKG--GLA--TPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP-SPKGGLATPS 1236
Score = 49.3 bits (116), Expect = 1e-05
Identities = 107/455 (23%), Positives = 143/455 (31%), Gaps = 75/455 (16%)
Query: 49 PPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPP 108
PP A P P S AP M ++ P P G+ P P PP
Sbjct: 1082 PPAATPPSPKGGPATPSPKGAP-------MPPAATPPSPKGGLATPPHKGAPTTPAATPP 1134
Query: 109 LPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILST 168
P G L PP +GAP P + K + PPP+ T + G S
Sbjct: 1135 SPKGGLATPPP--KGAP-TTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPS- 1190
Query: 169 IRLRPRQVLCEKCKSTLSPPE--ASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAA 226
P+ + SP A+P P AP P L P P+ T A
Sbjct: 1191 ----PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP-SPKGAPTTPA 1245
Query: 227 ATARRSK--RERREEDRAPAEQVPRSPVIKISYSTPQGKG---EVVKIPSRVHGSLEPFR 281
AT K AP P +K +TP KG V P G
Sbjct: 1246 ATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSP 1305
Query: 282 PQQAPQDDGSQDPEVLDRESRDRPSCAPS---------ASIPKLKLTRP-------VPAG 325
P+ AP + P P AP+ P L T P P+
Sbjct: 1306 PKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSS 1365
Query: 326 ADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGYLRDSSPAPCADGPAGGLADLSSGSS 385
+ P P H+ G + P + + P+P D + + LS
Sbjct: 1366 KEGPTPPAATPSHKGGPAMTPPSPKR----------GPAIPSPKGDPTSPAVIPLSP--- 1412
Query: 386 GEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASESACSSDSLDEARSS----GSEGTPA 441
K P P REG A + D + A + SL +A ++ G TP+
Sbjct: 1413 ------KKAPATPVTREGAA-----TPSKGD-LTPPAVTPVSLKKAPATSAPKGGPATPS 1460
Query: 442 DTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQS 476
GD P A P +E PP ++ T S
Sbjct: 1461 SKGD--PTLPAVTPPSPKE-----PPAPKQVATSS 1488
Score = 46.6 bits (109), Expect = 6e-05
Identities = 79/300 (26%), Positives = 104/300 (34%), Gaps = 37/300 (12%)
Query: 47 GLPPLAPLPQVDESPVNDSHGR-APEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPL 105
G P PLP+ +P + +P+ G A G+ +PP A P P P P
Sbjct: 1045 GSPAATPLPK--GAPTTPAATLPSPKGGPATPSLKGAPTPPAA--TPPSPKGGPATPSPK 1100
Query: 106 VPPLPAGSLPPYP------PYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNR 159
P+P + PP P P +GAP P + K + PPP+ T +
Sbjct: 1101 GAPMPPAATPPSPKGGLATPPHKGAP-TTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1159
Query: 160 DPGRLILSTIRLRPRQVLCEKCKSTLSPPE--ASPGPPAAPRARRRLGSGPDRELRKPEE 217
G L+T P+ + SP A+P P AP P L P
Sbjct: 1160 KGG---LAT--PPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP-S 1213
Query: 218 PENGEPTAAATARRSK--RERREEDRAPAEQVPRSPVIKISYSTPQGKG---EVVKIPSR 272
P+ T AAT K AP P K +TP KG P
Sbjct: 1214 PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPS 1273
Query: 273 VHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAGADLPPPK 332
+ G L P G+ +P V+ S P P+ S PK P P A P PK
Sbjct: 1274 LKGGL------ATPPHKGAPNPAVVTPPS---PKGGPATSPPK---GAPTPPAATPPSPK 1321
Score = 43.5 bits (101), Expect = 5e-04
Identities = 98/442 (22%), Positives = 134/442 (30%), Gaps = 64/442 (14%)
Query: 50 PLAPLPQVDESPVNDSHGRAPEEGDAEVMQL-GSSSPPPARGVQPPETTRPEPP------ 102
P A P P AP A L G + PP +G P P P
Sbjct: 1244 PAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPAT 1303
Query: 103 -PPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDP 161
PP P P + PP P G P P P PP T P
Sbjct: 1304 SPPKGAPTPPAATPPSPKGSPGTPPPK----------GAPTPPAVT------------PP 1341
Query: 162 GRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAA-PRARRRLGSGPDRELRKPEEPE- 219
T+ P K T + P PPAA P + P R P P
Sbjct: 1342 SPKGTPTL---PATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSP 1398
Query: 220 NGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQGKGEVVK---IPSRVHGS 276
G+PT+ A S + + P +PV + +TP KG++ P + +
Sbjct: 1399 KGDPTSPAVIPLSPK-----------KAPATPVTREGAATP-SKGDLTPPAVTPVSLKKA 1446
Query: 277 LEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAP------SASIPKLKLTRPVPAGADLPP 330
P+ P S+ L + P P ++S PK P P GA P
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLP 1506
Query: 331 PKIRLKPHRLGDSEHEPVYRAELVGELNGYLRDSSPAPCADGPA---GGLADLSSGSSGE 387
I P + + P R + + L +PA A A + S +
Sbjct: 1507 AVIPSSPKEVPAT---PSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPA 1563
Query: 388 DDDFKSCPQGPQGREGLAFLVSCPEGRADCASESACSSDSLDEARSSGSEGTPADTGDLS 447
K P P +E + P S + S TP S
Sbjct: 1564 IPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPS 1623
Query: 448 PGHGASAPSVSREARQTVPPLT 469
P G + P + + T PP+T
Sbjct: 1624 PEKGPATP--APKGTPTSPPVT 1643
Score = 40.8 bits (94), Expect = 0.004
Identities = 72/295 (24%), Positives = 108/295 (36%), Gaps = 36/295 (12%)
Query: 86 PPARGVQPPETTRPEPPPPLVPPLPAG---SLPPY--PPYFEGAPFPHPLWLRDTYKL-- 138
PPA V P+ T P P P P+ S PP P ++GAP P L +
Sbjct: 1550 PPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPS 1609
Query: 139 --WVPQPPPRTIKRTRRRLSRNRDPGR-----LILSTIRLRPRQVLCEKCKSTLSPPEAS 191
P PP T + + G + S+++ P CK + P+AS
Sbjct: 1610 PKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQAS 1669
Query: 192 PGPPA--APRARRRLGSGPDRE----LRKP--EEPENGEPTAAATARRSKRERREEDRAP 243
G PA P A + + P E + P + P+ + +A + + + P
Sbjct: 1670 KGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGP 1729
Query: 244 AEQV---PRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE 300
V P PV K S T +GK + P G L P + + + +VL +
Sbjct: 1730 LSTVAPAPLLPVQKDSSKTAKGK-DASHSPK---GPLAPPESKASTPLTAAAFEKVLPKP 1785
Query: 301 SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLG---DSEHEPVYRAE 352
S APS + PVP PPK + P G +S +P+ A+
Sbjct: 1786 ESASVSAAPSPPVSLPLAPSPVPT----LPPKQQFLPSSPGLVLESPSKPLAPAD 1836
Score = 39.7 bits (91), Expect = 0.008
Identities = 71/303 (23%), Positives = 97/303 (32%), Gaps = 35/303 (11%)
Query: 42 KSGLFGLPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEP 101
K GL PP +P + G A ++ P P G+ P
Sbjct: 1160 KGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPT 1219
Query: 102 PPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDP 161
P PP P G L P +GAP P + K PPP+ T +
Sbjct: 1220 TPAATPPSPKGGLATPSP--KGAP-TTPAATPPSPKGGPATPPPKGAP-TPPAATPPSLK 1275
Query: 162 GRLILSTIRLRPRQVL----CEKCKSTLSPPEASPGPPAA--PRARRRLGSGPDRELRKP 215
G L + P + K SPP+ +P PPAA P + G+ P + P
Sbjct: 1276 GGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTP 1335
Query: 216 ----EEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQGKGEVVKIPS 271
G PT AT SK +++ P P +TP KG P
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSK---GGPTTPSSKEGPTPPA-----ATPSHKGGPAMTPP 1387
Query: 272 RVHGSLEPFRPQQAPQDDGS-QDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAGADLPP 330
P R P G P V+ + P + P + P+ DL P
Sbjct: 1388 ------SPKRGPAIPSPKGDPTSPAVIPLSPKKAP------ATPVTREGAATPSKGDLTP 1435
Query: 331 PKI 333
P +
Sbjct: 1436 PAV 1438
Score = 39.3 bits (90), Expect = 0.010
Identities = 101/458 (22%), Positives = 143/458 (31%), Gaps = 76/458 (16%)
Query: 48 LPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPE------- 100
L P+A P+ E P DS A + L + SP P P+T RP
Sbjct: 760 LAPVASSPK--ECPTEDSGASATASSKGTLTYL-ADSPSPLGVSVSPQTKRPPTKKGSAG 816
Query: 101 PPPPL------VPPLPAGSLP------------------PYPPYFEGAPFPHPLWLRDTY 136
P P+ V P+ A LP P PP +GAP P +
Sbjct: 817 PDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPK 876
Query: 137 KLWVP---QPPPRTI-----KRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPP 188
+ +P P P + K + + P + S+ + R K P
Sbjct: 877 GVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSP 936
Query: 189 EASPGPPAAPRARRRLGS-------GPDRELRKPEEPENG--EPTAAATARRSKRERREE 239
+ +P PPAA + G P P P+ G P+
Sbjct: 937 KGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSP 996
Query: 240 DRAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDR 299
PA P+ + + P KG P S P +P+ + P
Sbjct: 997 KGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATP----- 1051
Query: 300 ESRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNG 359
+ P+ P+A++P K P+ P P P G A +
Sbjct: 1052 LPKGAPT-TPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPM------ 1104
Query: 360 YLRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADC-A 418
PA P GGLA + G + P P+G GLA P+G A
Sbjct: 1105 -----PPAATPPSPKGGLA--TPPHKGAPTTPAATPPSPKG--GLA--TPPPKGAPTTPA 1153
Query: 419 SESACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPS 456
+ L G+ TPA T SP G + PS
Sbjct: 1154 ATPPSPKGGLATPPPKGAPTTPAATPP-SPKGGLATPS 1190
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 52.8 bits (125), Expect = 9e-07
Identities = 77/312 (24%), Positives = 106/312 (33%), Gaps = 51/312 (16%)
Query: 42 KSGLFGLPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEP 101
+ G +G L P P +P P G ++ PPP ++PP P
Sbjct: 129 RPGQYGQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAP 188
Query: 102 PPPLV--------------PPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRT 147
PPP V P P +PP PP AP P P VP P P
Sbjct: 189 PPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPP----------VPAPAPPA 238
Query: 148 IKRTRRRLSRNRDPGRLI--LSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLG 205
+R PG + S + L RQ ++T + P SP P LG
Sbjct: 239 PASPHTVGTRLFPPGGVTKWKSDVALNGRQ-----AEATRASPPRSPAEPKG----SALG 289
Query: 206 SGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQGKGE 265
P+ L P + PT T+ +E +E R ++P P
Sbjct: 290 PNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAP-----SRLPLPPSF 344
Query: 266 VVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAG 325
++ S+V+ P +AP+ D P L + P S S + P PA
Sbjct: 345 HIRPASQVY-------PDRAPEPD---CPGELKATAPASPRLGQSQSQADERAGTPPPA- 393
Query: 326 ADLPPPKIRLKP 337
LPPP L P
Sbjct: 394 PPLPPPAPPLPP 405
Score = 50.4 bits (119), Expect = 4e-06
Identities = 106/454 (23%), Positives = 151/454 (33%), Gaps = 67/454 (14%)
Query: 48 LPP---LAPLPQV--DESPVNDSHGRAPEEGDAEVMQLGSS---------SPPPARGVQP 93
LPP + P QV D +P D G A +LG S +PPPA + P
Sbjct: 340 LPPSFHIRPASQVYPDRAPEPDCPGELKATAPASP-RLGQSQSQADERAGTPPPAPPLPP 398
Query: 94 PETTRPEPPPPL---VPPLPAGSLPPYPPY-FEGAPFPHPLWLRDTYKLWVPQPPPRTIK 149
P P P PPL PPLP +PP F P + + P+P P + +
Sbjct: 399 PAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTP-------KSSSPALKPKPNPPSPE 451
Query: 150 RTRRRLSRN-RDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLGSGP 208
T + RDP + + +R LC + PGP AP+++ GP
Sbjct: 452 NTASSAPVDWRDPSQ--MEKLRNELAAYLCGSRREDRFLSH-RPGPTVAPQSKEG-KKGP 507
Query: 209 DRELRKPEE------PENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQG 262
R PE+ P P E + AP+ +P I TP
Sbjct: 508 ----RLPEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTP-- 561
Query: 263 KGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPV 322
V +I + + L ++A GS P+ R C A KL
Sbjct: 562 --SVRQIRNELEARLSSAAEKEAKPSIGSLPPKPRLEGGR---ICENGADDDKLS----K 612
Query: 323 PAGADLPP------PKIRLKPHRLGDSEHEPVYRAELVGELNGYLRDSSPAPCADGPAGG 376
P +LPP P L+P + P E L ++P GPA
Sbjct: 613 PVAKNLPPQSTTLLPTTSLQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGPATP 672
Query: 377 LADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASESACSSDSLDEARSSGS 436
L +SG K+ G + + P + +E E +S
Sbjct: 673 L----KATSGPTTPLKA----TSGPAIASTATTLPTTTSQLMAEKDSGPAGQPEKPASQE 724
Query: 437 EGTPADT-GDLSPGHGASAPSVSREARQTVPPLT 469
TP+ G+ SP P+ + PP T
Sbjct: 725 VSTPSQARGEGSPSEATRLPTQGARSSAAFPPKT 758
Score = 35.0 bits (79), Expect = 0.19
Identities = 61/232 (26%), Positives = 78/232 (33%), Gaps = 43/232 (18%)
Query: 48 LPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVP 107
LP PLP+ SP + S+ R EE + + PPP P + PEPP P +
Sbjct: 954 LPQGHPLPKSFSSPPSPSNKREEEEEEFNFEVI----PPP-----PEFSNDPEPPAPALQ 1004
Query: 108 PLPAGSLPPYPPYFE---------GAP-------FPHPLWLRDTYKLWVPQPPPRTIKRT 151
L S PP Y + GAP FP L R++ +
Sbjct: 1005 YLGRQSSPPRNNYSDLRQLPNAGPGAPPALGFSRFPAGARYAGAGGLERFSGGGRSLIKK 1064
Query: 152 RRRLSR-NRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARR--RLGSGP 208
R + +R PG T R +LS P P P RR G P
Sbjct: 1065 RLYVGEPHRGPGLPHGGTGR-------------SLSSPNCFGPQPGGPEMRRVNSAGRAP 1111
Query: 209 DRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTP 260
L P G AA A+ + APA RSP Y +P
Sbjct: 1112 PGGLHAPRLSLEGAARGAAEAKHKAPGSADYGFAPA--AGRSPYTTTRYGSP 1161
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 52.8 bits (125), Expect = 9e-07
Identities = 77/312 (24%), Positives = 106/312 (33%), Gaps = 51/312 (16%)
Query: 42 KSGLFGLPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEP 101
+ G +G L P P +P P G ++ PPP ++PP P
Sbjct: 129 RPGQYGQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAP 188
Query: 102 PPPLV--------------PPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRT 147
PPP V P P +PP PP AP P P VP P P
Sbjct: 189 PPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPP----------VPAPAPPA 238
Query: 148 IKRTRRRLSRNRDPGRLI--LSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLG 205
+R PG + S + L RQ ++T + P SP P LG
Sbjct: 239 PASPHTVGTRLFPPGGVTKWKSDVALNGRQ-----AEATRASPPRSPAEPKG----SALG 289
Query: 206 SGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQGKGE 265
P+ L P + PT T+ +E +E R ++P P
Sbjct: 290 PNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAP-----SRLPLPPSF 344
Query: 266 VVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAG 325
++ S+V+ P +AP+ D P L + P S S + P PA
Sbjct: 345 HIRPASQVY-------PDRAPEPD---CPGELKATAPASPRLGQSQSQADERAGTPPPA- 393
Query: 326 ADLPPPKIRLKP 337
LPPP L P
Sbjct: 394 PPLPPPAPPLPP 405
Score = 50.4 bits (119), Expect = 4e-06
Identities = 106/454 (23%), Positives = 151/454 (33%), Gaps = 67/454 (14%)
Query: 48 LPP---LAPLPQV--DESPVNDSHGRAPEEGDAEVMQLGSS---------SPPPARGVQP 93
LPP + P QV D +P D G A +LG S +PPPA + P
Sbjct: 340 LPPSFHIRPASQVYPDRAPEPDCPGELKATAPASP-RLGQSQSQADERAGTPPPAPPLPP 398
Query: 94 PETTRPEPPPPL---VPPLPAGSLPPYPPY-FEGAPFPHPLWLRDTYKLWVPQPPPRTIK 149
P P P PPL PPLP +PP F P + + P+P P + +
Sbjct: 399 PAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTP-------KSSSPALKPKPNPPSPE 451
Query: 150 RTRRRLSRN-RDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLGSGP 208
T + RDP + + +R LC + PGP AP+++ GP
Sbjct: 452 NTASSAPVDWRDPSQ--MEKLRNELAAYLCGSRREDRFLSH-RPGPTVAPQSKEG-KKGP 507
Query: 209 DRELRKPEE------PENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQG 262
R PE+ P P E + AP+ +P I TP
Sbjct: 508 ----RLPEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTP-- 561
Query: 263 KGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPV 322
V +I + + L ++A GS P+ R C A KL
Sbjct: 562 --SVRQIRNELEARLSSAAEKEAKPSIGSLPPKPRLEGGR---ICENGADDDKLS----K 612
Query: 323 PAGADLPP------PKIRLKPHRLGDSEHEPVYRAELVGELNGYLRDSSPAPCADGPAGG 376
P +LPP P L+P + P E L ++P GPA
Sbjct: 613 PVAKNLPPQSTTLLPTTSLQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGPATP 672
Query: 377 LADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASESACSSDSLDEARSSGS 436
L +SG K+ G + + P + +E E +S
Sbjct: 673 L----KATSGPTTPLKA----TSGPAIASTATTLPTTTSQLMAEKDSGPAGQPEKPASQE 724
Query: 437 EGTPADT-GDLSPGHGASAPSVSREARQTVPPLT 469
TP+ G+ SP P+ + PP T
Sbjct: 725 VSTPSQARGEGSPSEATRLPTQGARSSAAFPPKT 758
Score = 35.0 bits (79), Expect = 0.19
Identities = 61/232 (26%), Positives = 78/232 (33%), Gaps = 43/232 (18%)
Query: 48 LPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVP 107
LP PLP+ SP + S+ R EE + + PPP P + PEPP P +
Sbjct: 954 LPQGHPLPKSFSSPPSPSNKREEEEEEFNFEVI----PPP-----PEFSNDPEPPAPALQ 1004
Query: 108 PLPAGSLPPYPPYFE---------GAP-------FPHPLWLRDTYKLWVPQPPPRTIKRT 151
L S PP Y + GAP FP L R++ +
Sbjct: 1005 YLGRQSSPPRNNYSDLRQLPNAGPGAPPALGFSRFPAGARYAGAGGLERFSGGGRSLIKK 1064
Query: 152 RRRLSR-NRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARR--RLGSGP 208
R + +R PG T R +LS P P P RR G P
Sbjct: 1065 RLYVGEPHRGPGLPHGGTGR-------------SLSSPNCFGPQPGGPEMRRVNSAGRAP 1111
Query: 209 DRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTP 260
L P G AA A+ + APA RSP Y +P
Sbjct: 1112 PGGLHAPRLSLEGAARGAAEAKHKAPGSADYGFAPA--AGRSPYTTTRYGSP 1161
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 52.8 bits (125), Expect = 9e-07
Identities = 77/312 (24%), Positives = 106/312 (33%), Gaps = 51/312 (16%)
Query: 42 KSGLFGLPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEP 101
+ G +G L P P +P P G ++ PPP ++PP P
Sbjct: 129 RPGQYGQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAP 188
Query: 102 PPPLV--------------PPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRT 147
PPP V P P +PP PP AP P P VP P P
Sbjct: 189 PPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPP----------VPAPAPPA 238
Query: 148 IKRTRRRLSRNRDPGRLI--LSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLG 205
+R PG + S + L RQ ++T + P SP P LG
Sbjct: 239 PASPHTVGTRLFPPGGVTKWKSDVALNGRQ-----AEATRASPPRSPAEPKG----SALG 289
Query: 206 SGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQGKGE 265
P+ L P + PT T+ +E +E R ++P P
Sbjct: 290 PNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAP-----SRLPLPPSF 344
Query: 266 VVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAG 325
++ S+V+ P +AP+ D P L + P S S + P PA
Sbjct: 345 HIRPASQVY-------PDRAPEPD---CPGELKATAPASPRLGQSQSQADERAGTPPPA- 393
Query: 326 ADLPPPKIRLKP 337
LPPP L P
Sbjct: 394 PPLPPPAPPLPP 405
Score = 50.4 bits (119), Expect = 4e-06
Identities = 106/454 (23%), Positives = 151/454 (33%), Gaps = 67/454 (14%)
Query: 48 LPP---LAPLPQV--DESPVNDSHGRAPEEGDAEVMQLGSS---------SPPPARGVQP 93
LPP + P QV D +P D G A +LG S +PPPA + P
Sbjct: 340 LPPSFHIRPASQVYPDRAPEPDCPGELKATAPASP-RLGQSQSQADERAGTPPPAPPLPP 398
Query: 94 PETTRPEPPPPL---VPPLPAGSLPPYPPY-FEGAPFPHPLWLRDTYKLWVPQPPPRTIK 149
P P P PPL PPLP +PP F P + + P+P P + +
Sbjct: 399 PAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTP-------KSSSPALKPKPNPPSPE 451
Query: 150 RTRRRLSRN-RDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLGSGP 208
T + RDP + + +R LC + PGP AP+++ GP
Sbjct: 452 NTASSAPVDWRDPSQ--MEKLRNELAAYLCGSRREDRFLSH-RPGPTVAPQSKEG-KKGP 507
Query: 209 DRELRKPEE------PENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQG 262
R PE+ P P E + AP+ +P I TP
Sbjct: 508 ----RLPEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTP-- 561
Query: 263 KGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPV 322
V +I + + L ++A GS P+ R C A KL
Sbjct: 562 --SVRQIRNELEARLSSAAEKEAKPSIGSLPPKPRLEGGR---ICENGADDDKLS----K 612
Query: 323 PAGADLPP------PKIRLKPHRLGDSEHEPVYRAELVGELNGYLRDSSPAPCADGPAGG 376
P +LPP P L+P + P E L ++P GPA
Sbjct: 613 PVAKNLPPQSTTLLPTTSLQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGPATP 672
Query: 377 LADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASESACSSDSLDEARSSGS 436
L +SG K+ G + + P + +E E +S
Sbjct: 673 L----KATSGPTTPLKA----TSGPAIASTATTLPTTTSQLMAEKDSGPAGQPEKPASQE 724
Query: 437 EGTPADT-GDLSPGHGASAPSVSREARQTVPPLT 469
TP+ G+ SP P+ + PP T
Sbjct: 725 VSTPSQARGEGSPSEATRLPTQGARSSAAFPPKT 758
Score = 35.0 bits (79), Expect = 0.19
Identities = 61/232 (26%), Positives = 78/232 (33%), Gaps = 43/232 (18%)
Query: 48 LPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVP 107
LP PLP+ SP + S+ R EE + + PPP P + PEPP P +
Sbjct: 954 LPQGHPLPKSFSSPPSPSNKREEEEEEFNFEVI----PPP-----PEFSNDPEPPAPALQ 1004
Query: 108 PLPAGSLPPYPPYFE---------GAP-------FPHPLWLRDTYKLWVPQPPPRTIKRT 151
L S PP Y + GAP FP L R++ +
Sbjct: 1005 YLGRQSSPPRNNYSDLRQLPNAGPGAPPALGFSRFPAGARYAGAGGLERFSGGGRSLIKK 1064
Query: 152 RRRLSR-NRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARR--RLGSGP 208
R + +R PG T R +LS P P P RR G P
Sbjct: 1065 RLYVGEPHRGPGLPHGGTGR-------------SLSSPNCFGPQPGGPEMRRVNSAGRAP 1111
Query: 209 DRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTP 260
L P G AA A+ + APA RSP Y +P
Sbjct: 1112 PGGLHAPRLSLEGAARGAAEAKHKAPGSADYGFAPA--AGRSPYTTTRYGSP 1161
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 52.0 bits (123), Expect = 2e-06
Identities = 67/289 (23%), Positives = 103/289 (35%), Gaps = 39/289 (13%)
Query: 52 APLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPAR---GVQPPETTRPEPPPPLVPP 108
+P + E+ R+P + S +PPP R PP P PPP P
Sbjct: 532 SPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSP 591
Query: 109 LPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRT------RRRLSRNRDPG 162
P PP + +P P K PPP +R +RR+S + P
Sbjct: 592 SPRRYSPPIQRRYSPSPPP---------KRRTASPPPPPKRRASPSPPPKRRVSHSPPPK 642
Query: 163 RLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGE 222
+ + R + + K S P S +P+ +R P R P+ +
Sbjct: 643 QRSSPVTKRRSPSLSSKHRKG--SSPSRSTREARSPQPNKR--HSPSPRPRAPQTSSSPP 698
Query: 223 PT-AAATARRSKRERREEDRAPAEQVPRSP----VIKISYSTPQGKGEVVKIPSRVHGSL 277
P A++ +R+ P +V R+P + K + +PQ V S V GS
Sbjct: 699 PVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRS-VSGSP 757
Query: 278 EPF--RPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPA 324
EP +P P SQ P + +P+ + K K P P+
Sbjct: 758 EPAAKKPPAPPSPVQSQSPST---------NWSPAVPVKKAKSPTPSPS 797
Score = 46.6 bits (109), Expect = 6e-05
Identities = 84/354 (23%), Positives = 126/354 (35%), Gaps = 43/354 (12%)
Query: 52 APLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPP--L 109
+P P+ SPV R+ + S SP P + + PE PEP + P
Sbjct: 179 SPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPEL--PEPSVKVKEPSVQ 236
Query: 110 PAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTR-RRLSRNRDPGRLILST 168
A S + P P P + +T R+R R SR+R R S
Sbjct: 237 EATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSR---SP 293
Query: 169 IRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLG----SGPDRELRKPEEPENGEPT 224
RPR+ + +S P P P P RRR P R R +
Sbjct: 294 SHTRPRR--RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRS 351
Query: 225 AAATARRSKRERREEDRAPAEQVPR---SPVIKISYSTPQGKGEVVKIPSRVHGSLEPFR 281
+A+ + S R+P ++ P+ SP K +P P R H P
Sbjct: 352 SASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASP-----PRRRHRPSPPAT 406
Query: 282 PQQAPQDDGSQDPEVLDRESRDRPSCAP---SASIPKLKLTRPVPAGADLPPPKIRLKPH 338
P P+ S P+ +R + R S +P S + K K T + P P + +
Sbjct: 407 P--PPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEK----RESPSPAPKPRKV 460
Query: 339 RLGDSEHE---PVYRAELVGELNGYLRDSSPAPCADGPAGGLADLSSGSSGEDD 389
L +SE + + A+ V + Y R + + +D S SS ED+
Sbjct: 461 ELSESEEDKGGKMAAADSVQQRRQYRRQNQQSS---------SDSGSSSSSEDE 505
Score = 40.0 bits (92), Expect = 0.006
Identities = 64/256 (25%), Positives = 95/256 (37%), Gaps = 60/256 (23%)
Query: 86 PPARGVQPPETTR---PEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQ 142
PP R PP TR P PP P+ P PP +P PQ
Sbjct: 374 PPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATP-PPKTRHSP--------------TPQ 418
Query: 143 PPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARR 202
RT +++R +S R G++ K K T E P AP+ R+
Sbjct: 419 QSNRT-RKSRVSVSPGRTSGKV--------------TKHKGT----EKRESPSPAPKPRK 459
Query: 203 RLGSGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQG 262
EL + EE + G+ AA + ++ ++ RR+ ++ ++ S S+
Sbjct: 460 -------VELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSD----------SGSSSSS 502
Query: 263 KGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTR-P 321
+ E K S V R + +P S P +E+ R S S P + R P
Sbjct: 503 EDERPK-RSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSP 561
Query: 322 VPAGADLPPPKIRLKP 337
PA PPP+ R P
Sbjct: 562 SPA----PPPRRRRTP 573
Score = 31.2 bits (69), Expect = 2.8
Identities = 33/144 (22%), Positives = 50/144 (34%), Gaps = 5/144 (3%)
Query: 191 SPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRS 250
SP PP R R + P R R P P + RRS RR P
Sbjct: 549 SPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSP 608
Query: 251 PVIKISYS--TPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCA 308
P + + S P + P + S P Q++ + P + S+ R +
Sbjct: 609 PPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSL---SSKHRKGSS 665
Query: 309 PSASIPKLKLTRPVPAGADLPPPK 332
PS S + + +P + P P+
Sbjct: 666 PSRSTREARSPQPNKRHSPSPRPR 689
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 50.8 bits (120), Expect = 3e-06
Identities = 88/340 (25%), Positives = 120/340 (35%), Gaps = 44/340 (12%)
Query: 59 ESPVNDSHGRAPEE-GDAEVMQLGSSS-----PPPARGVQPPETTRPEPPPPLVPPLPAG 112
E D G EE AE M + PPP P P PPP PP P
Sbjct: 370 EEEEKDKEGEEKEERAVAEEMMPAAEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLC 429
Query: 113 SLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLR 172
PP P P P P ++ + P P T R R GR L+ +
Sbjct: 430 PPPPPPVSPPPLPSPPPPPAQEEQEESPPPVVPATCSRKR---------GRPPLTPSQRA 480
Query: 173 PRQVLCEKCKSTLSPPEASP-----GPP-----AAPRARRRLGSGPDRELRKPEEPENGE 222
R+ + T SPP +P GPP AP++ L + +R+ P
Sbjct: 481 EREAARAGPEGT-SPPTPTPSTATGGPPEDSPTVAPKSTTFL-----KNIRQFIMP---- 530
Query: 223 PTAAATARRSKRERR--EEDRAPAEQVPRSPVIKISYST-PQGKGEVVKIPSRVHGSLEP 279
+A ++R K RR +ED +V SPV++ +T P E +PS P
Sbjct: 531 VVSARSSRVIKTPRRFMDEDPPKPPKVEVSPVLRPPITTSPPVPQEPAPVPSPPRAPTPP 590
Query: 280 FRPQQAPQDDGSQDPEVLDR---ESRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLK 336
P P+ S E R +R+ P P+ P P PA + P +R
Sbjct: 591 STPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAPSPPPAPATSSRRPLLLR-A 649
Query: 337 PHRLGDSEHEPVYRAELVGELNG--YLRDSSPAPCADGPA 374
P H +Y + L G + P P D PA
Sbjct: 650 PQFTPSEAHLKIYESVLTPPPLGAPEAPEPEPPPADDSPA 689
Score = 37.0 bits (84), Expect = 0.051
Identities = 86/402 (21%), Positives = 126/402 (31%), Gaps = 80/402 (19%)
Query: 49 PPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPP----- 103
PP AP P P+ + E L PPP PP P P P
Sbjct: 583 PPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAPSPPPAPATSSR 642
Query: 104 -PLV----------------------PPLPAGSLP-PYPPYFEGAPF-PHPLWLRDTYKL 138
PL+ PPL A P P PP + +P P P + T L
Sbjct: 643 RPLLLRAPQFTPSEAHLKIYESVLTPPPLGAPEAPEPEPPPADDSPAEPEPRAVGRTNHL 702
Query: 139 WVPQPPPRTIKRTRRRLSRNRDP----GRLILSTIRLRPRQVL-CEKCKSTLSPPEASPG 193
+P+ P + +S + P G + + L+P Q L + L PP+
Sbjct: 703 SLPRFAPVVTTPVKAEVSPHGAPALSNGPQTQAQL-LQPLQALQTQLLPQALPPPQPQLQ 761
Query: 194 PPAAPR-----ARRRLGSGPDRELRKPEE----------------PENGEPTAAATARRS 232
PP +P+ + R+ L EE + + AA+ S
Sbjct: 762 PPPSPQQMPPLEKARIAGVGSLPLSGVEEKMFSLLKRAKVQLFKIDQQQQQKVAASMPLS 821
Query: 233 KRERREEDRAPAEQV-PRSPV------IKISYSTPQGKGEVVKIPSRVH---------GS 276
+ EE +Q+ R PV ++ P G V+ P H G
Sbjct: 822 PGGQMEEVAGAVKQISDRGPVRSEDESVEAKRERPSGPESPVQGPRIKHVCRHAAVALGQ 881
Query: 277 LEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIP----KLKLTRPVPAGADLPPPK 332
P+ P+ + D + D S + + S+P + K+ P G P
Sbjct: 882 ARAMVPEDVPRLSALPLRDRQDLATEDTSSASETESVPSRSRRGKVEAAGPGGESEPTGS 941
Query: 333 ---IRLKPHRLGDSEHEPVYRAELVGELNGYLRDSSPAPCAD 371
+ P R S H R G G LR C +
Sbjct: 942 GGTLAHTPRRSLPSHHGKKMRMARCGHCRGCLRVQDCGSCVN 983
Score = 35.8 bits (81), Expect = 0.11
Identities = 72/274 (26%), Positives = 92/274 (33%), Gaps = 37/274 (13%)
Query: 85 PPPARGVQPPETTRPE---PPP------------PLVPPLPAGSLPP---YPPYFEGAPF 126
PPP+R PP T P+ PPP L PP PA S PP P FE
Sbjct: 1923 PPPSRWASPPLKTSPQLRVPPPTSVVTALTPTSGELAPPGPAPSPPPPEDLGPDFEDMEV 1982
Query: 127 PHPLWLRD---TYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKS 183
L D L +P I S + PG S P +
Sbjct: 1983 VSGLSAADLDFAASLLGTEPFQEEIVAAGAMGSSHGGPGD--SSEEESSPTSRYIHFPVT 2040
Query: 184 TLSPPEASP-GPPAAPRARRRLG--SGPDRELRKPEEPE-NGEPTAAATARRSKRERREE 239
+S P +P P APR + G G D E ++P G P + R+
Sbjct: 2041 VVSAPGLAPSATPGAPRIEQLDGVDDGTDSEAEAVQQPRGQGTPPSGPGVVRAGVLGAAG 2100
Query: 240 DRA-PAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLD 298
DRA P E +P S ++ G G+ G E P P +GSQ + L
Sbjct: 2101 DRARPPEDLP-SEIVDFVLKNLGGPGD------GGAGPREESLPPAPPLANGSQPSQGLT 2153
Query: 299 RESRDRPSCAPSASIPKLKLTRPVPAGADLPPPK 332
D A +P R + G PPK
Sbjct: 2154 ASPAD--PTRTFAWLPGAPGVRVLSLGPAPEPPK 2185
Score = 32.3 bits (72), Expect = 1.3
Identities = 69/252 (27%), Positives = 85/252 (33%), Gaps = 67/252 (26%)
Query: 49 PPLA----PLPQVDESPVNDSHGRA--PEEGDAEVMQLGSSSPPPARG------------ 90
PPLA P + SP + + A P V+ LG + PP
Sbjct: 2140 PPLANGSQPSQGLTASPADPTRTFAWLPGAPGVRVLSLGPAPEPPKPATSKIILVNKLGQ 2199
Query: 91 --VQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTI 148
V+ P PPP PPLP P P + P P L + + P PPP
Sbjct: 2200 VFVKMAGEGEPVPPPVKQPPLPPTISPTAPTSWTLPPGP-LLGVLPVVGVVRPAPPPPP- 2257
Query: 149 KRTRRRLSRNRDPGRLILST-IRLRPRQVLCEKCKSTL---SPPEASPGPPAAPRARR-- 202
P L+LS+ PRQ + K ST SPP +P P APR
Sbjct: 2258 -----------PPLTLVLSSGPASPPRQAIRVKRVSTFSGRSPP--APPPYKAPRLDEDG 2304
Query: 203 ----------RLGSGPDRELR-------------KPEEPENGEPTAAATARRSKRERREE 239
LGSG +R +P EP GE + RS E
Sbjct: 2305 EASEDTPQVPGLGSGGFSRVRMKTPTVRGVLDLDRPGEPA-GEESPGPLQERSPLLPLPE 2363
Query: 240 DRAPAEQVPRSP 251
D P QVP P
Sbjct: 2364 DGPP--QVPDGP 2373
Score = 30.8 bits (68), Expect = 3.6
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 188 PEASPGPPAAPRARRRLGSGPDRE--LRKPEEPENGEPTAAATARRSKRERREED 240
PEASPGPP RR G+G RE + P E +ARR ++R D
Sbjct: 1036 PEASPGPPG---PRRGAGAGGPREEVVAHPGPEEQDSLLQRKSARRCVKQRPSYD 1087
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 50.8 bits (120), Expect = 3e-06
Identities = 48/176 (27%), Positives = 69/176 (39%), Gaps = 19/176 (10%)
Query: 205 GSGPDRELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQGKG 264
G+ P+ + K + E E A AT S+RE E P ++ +P +++S+ G
Sbjct: 24 GASPEEAVEKAGKME--EAAAGATKASSRREAEEMKLEPLQEREPAPEENLTWSSSGGDE 81
Query: 265 EVV-KIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVP 323
+V+ IP R H S P P++ P+ + R R P S P RP P
Sbjct: 82 KVLPSIPLRCHSSSSPVCPRRKPRP---------RPQPRARSRSQPGLSAPPPPPARPPP 132
Query: 324 AGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGYLRDSSPAPCADGPAGGLAD 379
PPP R + R P R + +G L S G GGL D
Sbjct: 133 PPPPPPPPAPRPRAWRGSRRRSRPGSRPQTRRSCSGDLDGS-------GDPGGLGD 181
Score = 33.5 bits (75), Expect = 0.56
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 21/115 (18%)
Query: 69 APEE--------GDAEVM-----QLGSSSPP------PARGVQPPETTRPEPPPPLVPPL 109
APEE GD +V+ + SSS P P QP +R +P PP
Sbjct: 67 APEENLTWSSSGGDEKVLPSIPLRCHSSSSPVCPRRKPRPRPQPRARSRSQPGLSAPPPP 126
Query: 110 PAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRL 164
PA PP PP P P P R + + P P+T + L + DPG L
Sbjct: 127 PA--RPPPPPPPPPPPAPRPRAWRGSRRRSRPGSRPQTRRSCSGDLDGSGDPGGL 179
Score = 30.0 bits (66), Expect = 6.2
Identities = 24/76 (31%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Query: 180 KCKSTLSP--PEASPGPPAAPRARRRLGSG---PDRELRKPEEPENGEPTAAATARRSKR 234
+C S+ SP P P P PRAR R G P +P P P A R +
Sbjct: 90 RCHSSSSPVCPRRKPRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPPPPAPRPRAWRG 149
Query: 235 ERREEDRAPAEQVPRS 250
RR Q RS
Sbjct: 150 SRRRSRPGSRPQTRRS 165
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 48.5 bits (114), Expect = 2e-05
Identities = 127/500 (25%), Positives = 158/500 (31%), Gaps = 95/500 (19%)
Query: 47 GLPPLAPLPQVDESPVNDSHGRAP------EEGDAEVMQLGSSSPPPARGVQPPETTRPE 100
G P PLP SP +S G +E A G SPP R + PE T E
Sbjct: 601 GGPEPLPLPPA-RSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQERNL--PEGT--E 655
Query: 101 PPPPLVPPLPAGSLPPY----PPYFEGAPFPHPL----WLRDTYKLWVPQPPPRTIKRTR 152
PP L LP PPY P +P P P W +Y P PP + R
Sbjct: 656 RPPKLCSSLPGQGPPPYVFMYPQGSPSSPAPGPPPGAPWAF-SYLAGPPATPPDPPRPKR 714
Query: 153 RRLSRNRDPGRL-----------------ILSTIRLRP-RQVLCEKCKS-TLSPPEASP- 192
R S +R PG +T+ RP R L S T +P +P
Sbjct: 715 RSHSLSR-PGPTEGDAEGEAEGPVGSTLGSYATLTRRPGRSALVRTSPSVTPTPARGTPR 773
Query: 193 -----------GPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREEDR 241
GPP P R SGP E +E + A RR+ E
Sbjct: 774 SQSFALRARRKGPPPPPPKRLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSE 833
Query: 242 APAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRES 301
P P P P +G P + +G E +
Sbjct: 834 PPGPPAPAGPASDTEEEEPGPEGT---------------PPSRGSSGEGLPFAEEGNLTI 878
Query: 302 RDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGYL 361
+ RP P+ P+ PVP G D + R E EP+ A L
Sbjct: 879 KQRPK--PAGPPPR---ETPVPPGLDFNLTESDTVKRRPKCREREPLQTALLA------- 926
Query: 362 RDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASES 421
A GPA A L S + GE S PQ P+ A V P +
Sbjct: 927 --FGVASATPGPA---APLPSPTPGESPPASSLPQ-PEPSSLPAQGVPTPLAPSPAMQPP 980
Query: 422 A--CSSDSLDEARSS---GSEGTPADTGDL--SPGHGASAPSVSREARQTV---PPLTVR 471
C L+ + +S G PA L PG G + VS Q P L R
Sbjct: 981 VPPCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAFSGPKLAPR 1040
Query: 472 LHTQSVSECITEDGRTVAVG 491
L + V E TV G
Sbjct: 1041 LGPRPVPPPRPESTGTVGPG 1060
Score = 31.6 bits (70), Expect = 2.1
Identities = 35/168 (20%), Positives = 55/168 (32%), Gaps = 31/168 (18%)
Query: 85 PPPARGVQPPETTRPEPPPPLVP----PLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWV 140
P P G PP ++ P+P P +P P P P P P P
Sbjct: 941 PSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQP-----PVP------------- 982
Query: 141 PQPPPRTIKRTRRRLSRNRDPGRLILSTIRL-------RPRQVLCEKC--KSTLSPPEAS 191
P P P R + +P + +++ +P V C + P
Sbjct: 983 PCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAFSGPKLAPRLG 1042
Query: 192 PGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREE 239
P P PR GP + ++ E+ + A A +S + +E
Sbjct: 1043 PRPVPPPRPESTGTVGPGQAQQRLEQTSSSLAAALRAAEKSIGTKEQE 1090
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 48.5 bits (114), Expect = 2e-05
Identities = 127/500 (25%), Positives = 158/500 (31%), Gaps = 95/500 (19%)
Query: 47 GLPPLAPLPQVDESPVNDSHGRAP------EEGDAEVMQLGSSSPPPARGVQPPETTRPE 100
G P PLP SP +S G +E A G SPP R + PE T E
Sbjct: 683 GGPEPLPLPPA-RSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQERNL--PEGT--E 737
Query: 101 PPPPLVPPLPAGSLPPY----PPYFEGAPFPHPL----WLRDTYKLWVPQPPPRTIKRTR 152
PP L LP PPY P +P P P W +Y P PP + R
Sbjct: 738 RPPKLCSSLPGQGPPPYVFMYPQGSPSSPAPGPPPGAPWAF-SYLAGPPATPPDPPRPKR 796
Query: 153 RRLSRNRDPGRL-----------------ILSTIRLRP-RQVLCEKCKS-TLSPPEASP- 192
R S +R PG +T+ RP R L S T +P +P
Sbjct: 797 RSHSLSR-PGPTEGDAEGEAEGPVGSTLGSYATLTRRPGRSALVRTSPSVTPTPARGTPR 855
Query: 193 -----------GPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREEDR 241
GPP P R SGP E +E + A RR+ E
Sbjct: 856 SQSFALRARRKGPPPPPPKRLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSE 915
Query: 242 APAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRES 301
P P P P +G P + +G E +
Sbjct: 916 PPGPPAPAGPASDTEEEEPGPEGT---------------PPSRGSSGEGLPFAEEGNLTI 960
Query: 302 RDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGYL 361
+ RP P+ P+ PVP G D + R E EP+ A L
Sbjct: 961 KQRPK--PAGPPPR---ETPVPPGLDFNLTESDTVKRRPKCREREPLQTALLA------- 1008
Query: 362 RDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASES 421
A GPA A L S + GE S PQ P+ A V P +
Sbjct: 1009 --FGVASATPGPA---APLPSPTPGESPPASSLPQ-PEPSSLPAQGVPTPLAPSPAMQPP 1062
Query: 422 A--CSSDSLDEARSS---GSEGTPADTGDL--SPGHGASAPSVSREARQTV---PPLTVR 471
C L+ + +S G PA L PG G + VS Q P L R
Sbjct: 1063 VPPCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAFSGPKLAPR 1122
Query: 472 LHTQSVSECITEDGRTVAVG 491
L + V E TV G
Sbjct: 1123 LGPRPVPPPRPESTGTVGPG 1142
Score = 31.6 bits (70), Expect = 2.1
Identities = 35/168 (20%), Positives = 55/168 (32%), Gaps = 31/168 (18%)
Query: 85 PPPARGVQPPETTRPEPPPPLVP----PLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWV 140
P P G PP ++ P+P P +P P P P P P P
Sbjct: 1023 PSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQP-----PVP------------- 1064
Query: 141 PQPPPRTIKRTRRRLSRNRDPGRLILSTIRL-------RPRQVLCEKC--KSTLSPPEAS 191
P P P R + +P + +++ +P V C + P
Sbjct: 1065 PCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAFSGPKLAPRLG 1124
Query: 192 PGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREE 239
P P PR GP + ++ E+ + A A +S + +E
Sbjct: 1125 PRPVPPPRPESTGTVGPGQAQQRLEQTSSSLAAALRAAEKSIGTKEQE 1172
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 48.1 bits (113), Expect = 2e-05
Identities = 53/170 (31%), Positives = 63/170 (37%), Gaps = 11/170 (6%)
Query: 81 GSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWV 140
GS PP ARG P ET P P +PPL PP P G P P R + W
Sbjct: 15 GSHFPPAARGRLPGETLSPSPRAAALPPLQ--QRPPGAPGALGRPKPVSRGPRAGLREWP 72
Query: 141 PQP--PPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAP 198
QP P + R PG T P + +T+S SPG PA
Sbjct: 73 QQPWRPGPLGAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGL 132
Query: 199 RARR--RLGSGPDRELRKPEEPENGEPTAAATAR---RSKRERREEDRAP 243
R R G + P P P A T R S+R R+E+ R P
Sbjct: 133 HRSREPRPQDGTPPPVDTP--PRTARPRPAFTPRPVVGSERPRQEQLRGP 180
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 48.1 bits (113), Expect = 2e-05
Identities = 53/170 (31%), Positives = 63/170 (37%), Gaps = 11/170 (6%)
Query: 81 GSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWV 140
GS PP ARG P ET P P +PPL PP P G P P R + W
Sbjct: 15 GSHFPPAARGRLPGETLSPSPRAAALPPLQ--QRPPGAPGALGRPKPVSRGPRAGLREWP 72
Query: 141 PQP--PPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAP 198
QP P + R PG T P + +T+S SPG PA
Sbjct: 73 QQPWRPGPLGAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGL 132
Query: 199 RARR--RLGSGPDRELRKPEEPENGEPTAAATAR---RSKRERREEDRAP 243
R R G + P P P A T R S+R R+E+ R P
Sbjct: 133 HRSREPRPQDGTPPPVDTP--PRTARPRPAFTPRPVVGSERPRQEQLRGP 180
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 48.1 bits (113), Expect = 2e-05
Identities = 53/170 (31%), Positives = 63/170 (37%), Gaps = 11/170 (6%)
Query: 81 GSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWV 140
GS PP ARG P ET P P +PPL PP P G P P R + W
Sbjct: 15 GSHFPPAARGRLPGETLSPSPRAAALPPLQ--QRPPGAPGALGRPKPVSRGPRAGLREWP 72
Query: 141 PQP--PPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAP 198
QP P + R PG T P + +T+S SPG PA
Sbjct: 73 QQPWRPGPLGAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGL 132
Query: 199 RARR--RLGSGPDRELRKPEEPENGEPTAAATAR---RSKRERREEDRAP 243
R R G + P P P A T R S+R R+E+ R P
Sbjct: 133 HRSREPRPQDGTPPPVDTP--PRTARPRPAFTPRPVVGSERPRQEQLRGP 180
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 48.1 bits (113), Expect = 2e-05
Identities = 100/435 (22%), Positives = 143/435 (32%), Gaps = 117/435 (26%)
Query: 53 PLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAG 112
PLP+ + P N + ++ E +LGS V PE+ +P P PL P P
Sbjct: 110 PLPEHQKIPCNSAEPKSIPALSMETQKLGS--------VLSPESPKPTPLTPLEPQKPGS 161
Query: 113 SLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLR 172
+ P P P P + + P+PP ++L+ P +
Sbjct: 162 VVSPELQ----TPLPSPEPSKPA-SVSSPEPPKSVPVCESQKLAPVPSPEPQ-------K 209
Query: 173 PRQVLCEKCKSTLSPPEASP--------GPPAAPRARRRLGSGPDRE-LRKPEEPENGEP 223
P V E K+TLS P+ GPP+A S P+ L EP P
Sbjct: 210 PAPVSPESVKATLSNPKPQKQSHFPETLGPPSA--------SSPESPVLAASPEPWGPSP 261
Query: 224 TAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQ 283
A+ +R+S R E R P+ P +P+ + P+ GS +P P
Sbjct: 262 AASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPA---PAVSPGSWKPGPP- 317
Query: 284 QAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDS 343
GS P + PSAS K +P P+ + P KP
Sbjct: 318 ------GSPRPWKSN----------PSASSGPWKPAKPAPSVSPGP-----WKP------ 350
Query: 344 EHEPVYRAELVGELNGYLRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREG 403
+ SP P P+ A S SS +KS P P
Sbjct: 351 -----------------IPSVSPGPWKPTPSVSSASWKS-SSVSPSSWKSPPASP----- 387
Query: 404 LAFLVSCPEGRADCASESACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQ 463
E+ SG LSP H + P VS E R+
Sbjct: 388 --------------------------ESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRK 421
Query: 464 TVPPLTVRLHTQSVS 478
PPL+ + + + S
Sbjct: 422 PGPPLSPEIRSPAGS 436
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 48.1 bits (113), Expect = 2e-05
Identities = 29/62 (46%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 86 PPARGVQPPETTRPEPPPPLVPPLPAGSLPP-YPPYFEGAPFPHPLWLRDTYKLWVPQPP 144
PPA P P PPPP VPP PA PP PP G P P P TY P PP
Sbjct: 467 PPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPP-----TYNPNFPPPP 521
Query: 145 PR 146
PR
Sbjct: 522 PR 523
Score = 37.7 bits (86), Expect = 0.030
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Query: 85 PPPARGVQPPETT-RPE--PPPPLVPPLPAGSLPPYPPYFEGAP---FPHP 129
PPP G PP T P PPPP +PP A +PP+PP G P +P P
Sbjct: 500 PPPTPGYPPPPPTYNPNFPPPPPRLPPTHA--VPPHPPPGLGLPPASYPPP 548
Score = 35.8 bits (81), Expect = 0.11
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 84 SPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQP 143
+PPP PP + PPP + PP P G PP P Y P P P L T+ + P P
Sbjct: 481 NPPPPPVPPPPASF---PPPAIPPPTP-GYPPPPPTYNPNFP-PPPPRLPPTHAV-PPHP 534
Query: 144 PP 145
PP
Sbjct: 535 PP 536
Score = 34.3 bits (77), Expect = 0.33
Identities = 37/126 (29%), Positives = 48/126 (38%), Gaps = 30/126 (23%)
Query: 48 LPPLAPLPQVDES-PVNDSHGRAPEEGDAE--------VMQLGSSSPPPARG-------- 90
L P +PQV +S P S P++ D + Q SP P+
Sbjct: 279 LQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVV 338
Query: 91 VQPPETTR-PEPPPPLV-------PPLPAGSLPP--YPPYFEG---APFPHPLWLRDTYK 137
V P E + EPPPP + PPLP PP PP A P P+ D K
Sbjct: 339 VSPKEENKAAEPPPPKIPKIETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPK 398
Query: 138 LWVPQP 143
+ +P P
Sbjct: 399 VQIPPP 404
Score = 33.9 bits (76), Expect = 0.43
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 13/53 (24%)
Query: 85 PPPARGVQPPETTRPEPPPPL--------VPPLPAGSLPPYPPYFEGAPFPHP 129
PPP + P P PPP L P +P G PP PP P P P
Sbjct: 518 PPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPP-----PIPPP 565
Score = 32.3 bits (72), Expect = 1.3
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 85 PPPARGV----QPPETTRPEPPPPLVPPLPAGSLPP 116
PPP G+ PP P PP+ PP+P +PP
Sbjct: 534 PPPGLGLPPASYPPPAVPPGGQPPVPPPIPPPGMPP 569
Score = 32.0 bits (71), Expect = 1.6
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 49 PPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPP-PARGVQPPETTRPEP--PPPL 105
PP P + P+ +H P+ LG + PP P P+ P P P P+
Sbjct: 352 PPKIPKIETTHPPLPPAHP-PPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPV 410
Query: 106 VPPLPAGSLPPYPP 119
P P PP PP
Sbjct: 411 HQPPPLPHRPPPPP 424
Score = 31.2 bits (69), Expect = 2.8
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 48 LPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSS-PPPARGVQ----PPETTRPEPP 102
LPP P P + P+ + G A G + L PPPA PP RP PP
Sbjct: 365 LPPAHPPPD-RKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHRPPPP 423
Query: 103 PP 104
PP
Sbjct: 424 PP 425
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 47.8 bits (112), Expect = 3e-05
Identities = 34/85 (40%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 46 FGLPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETT-RPEPPPP 104
FG PPL PLP PV G P G PPP +G PP P PP P
Sbjct: 284 FGQPPLGPLPPGPPPPVP---GYGPPPGP----------PPPQQGPPPPPGPFPPRPPGP 330
Query: 105 LVPPLPAGSLPPYPPYFEGAPFPHP 129
L PPL P P GAP P P
Sbjct: 331 LGPPLTLAPPPHLPGPPPGAPPPAP 355
Score = 37.7 bits (86), Expect = 0.030
Identities = 21/50 (42%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 80 LGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHP 129
LG PP G PP P PPL P G PP P F G PF P
Sbjct: 241 LGPPGPPGPPGPPPPGQVLP---PPLAGPPNRGDRPPPPVLFPGQPFGQP 287
Score = 35.4 bits (80), Expect = 0.15
Identities = 36/120 (30%), Positives = 40/120 (33%), Gaps = 25/120 (20%)
Query: 81 GSSSPPPARGVQPPETTRP-----EPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDT 135
G PPP V PP P PPPP++ P PP P G P P P
Sbjct: 248 GPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVP-----G 302
Query: 136 YKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPP 195
Y PPP+ R PG L TL+PP PGPP
Sbjct: 303 YGPPPGPPPPQQGPPPPPGPFPPRPPGPL---------------GPPLTLAPPPHLPGPP 347
Score = 31.2 bits (69), Expect = 2.8
Identities = 23/53 (43%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 81 GSSSPPPAR--GVQPPETTRPEPP-PPLVPPLPAGSLPPYPPYFEGAPFPHPL 130
G P PA G PP PP PPL PP P G P PP G P PL
Sbjct: 214 GDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPP---GQVLPPPL 263
Score = 29.6 bits (65), Expect = 8.1
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 15/52 (28%)
Query: 94 PETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPP 145
P P PPP P PAG PP PP P P P P PPP
Sbjct: 218 PGPAGPGGPPP---PFPAGQTPPRPPLGPPGP-PGP-----------PGPPP 254
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.134 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,979,465
Number of Sequences: 37866
Number of extensions: 2171980
Number of successful extensions: 21812
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 970
Number of HSP's that attempted gapping in prelim test: 11995
Number of HSP's gapped (non-prelim): 6127
length of query: 590
length of database: 18,247,518
effective HSP length: 108
effective length of query: 482
effective length of database: 14,157,990
effective search space: 6824151180
effective search space used: 6824151180
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.