Guide to the Human Genome
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Name: SEZ6 Sequence: fasta or formatted (994aa) NCBI GI: 148839280
Description:

seizure related 6 homolog isoform 1

Referenced in:

Additional Brain Proteins

Other entries for this name:
alt prot [993aa] seizure related 6 homolog isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         70           3
 C cysteine            2.6         26           1
 D aspartate           4.7         47           3
 E glutamate           5.8         58           2
 F phenylalanine       3.9         39           2
 G glycine             8.9         88           2
 H histidine           3.0         30           2
 I isoleucine          4.1         41           3
 K lysine              2.2         22           1
 L leucine             8.9         88           4
 M methionine          1.1         11           1
 N asparagine          2.1         21           2
 P proline            10.6        105           3
 Q glutamine           4.3         43           2
 R arginine            4.4         44           2
 S serine              8.5         84           3
 T threonine           7.1         71           6
 V valine              6.2         62           2
 W tryptophan          1.4         14           1
 Y tyrosine            3.0         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   seizure related 6 homolog isoform 1 
SEZ6                  0.991   seizure related 6 homolog isoform 2 
SEZ6L                 0.402   seizure related 6 homolog (mouse)-like precursor [Ho...
SEZ6L2                0.368   seizure related 6 homolog (mouse)-like 2 isoform 2 ...
SEZ6L2                0.368   seizure related 6 homolog (mouse)-like 2 isoform 1 [H...
SEZ6L2                0.362   seizure related 6 homolog (mouse)-like 2 isoform 3 ...
SEZ6L2                0.317   seizure related 6 homolog (mouse)-like 2 isoform 4 ...
CSMD2                 0.120   CUB and Sushi multiple domains 2 
CSMD1                 0.109   CUB and Sushi multiple domains 1 
CSMD3                 0.102   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.102   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.102   CUB and Sushi multiple domains 3 isoform 1 
MASP1                 0.040   mannan-binding lectin serine protease 1 isoform 2 pr...
MASP2                 0.038   mannan-binding lectin serine protease 2 isoform 1 pr...
MASP1                 0.037   mannan-binding lectin serine protease 1 isoform 1 pr...
CR2                   0.037   complement component (3d/Epstein Barr virus) recepto...
SVEP1                 0.036   polydom 
CR1                   0.036   complement receptor 1 isoform S precursor 
CR1                   0.036   complement receptor 1 isoform F precursor 
CR1L                  0.035   complement component (3b/4b) receptor 1-like 
CR2                   0.033   complement component (3d/Epstein Barr virus) recepto...
TLL2                  0.031   tolloid-like 2 
MASP1                 0.031   mannan-binding lectin serine protease 1 isoform 3 [H...
C1S                   0.030   complement component 1, s subcomponent precursor [Hom...
C1S                   0.030   complement component 1, s subcomponent precursor [Ho...
BMP1                  0.030   bone morphogenetic protein 1 isoform 3 precursor [Hom...
CD55                  0.029   decay accelerating factor for complement isoform 2 ...
CD55                  0.029   decay accelerating factor for complement isoform 1 p...
BMP1                  0.028   bone morphogenetic protein 1 isoform 2 precursor [Hom...
BMP1                  0.027   bone morphogenetic protein 1 isoform 1 precursor [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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