Guide to the Human Genome
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Name: MASP1 Sequence: fasta or formatted (380aa) NCBI GI: 73623026
Description:

mannan-binding lectin serine protease 1 isoform 3

Referenced in:

Complement

Other entries for this name:
alt prot [699aa] mannan-binding lectin serine protease 1 isoform 1 precursor
alt prot [728aa] mannan-binding lectin serine protease 1 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6         10           2
 C cysteine            4.5         17           1
 D aspartate           6.8         26           1
 E glutamate           9.7         37           2
 F phenylalanine       5.8         22           2
 G glycine             5.5         21           2
 H histidine           2.6         10           1
 I isoleucine          4.7         18           1
 K lysine              5.0         19           2
 L leucine             7.1         27           3
 M methionine          1.8          7           1
 N asparagine          4.2         16           2
 P proline             5.8         22           2
 Q glutamine           3.4         13           1
 R arginine            3.4         13           1
 S serine              8.2         31           2
 T threonine           6.1         23           2
 V valine              6.1         23           2
 W tryptophan          1.1          4           1
 Y tyrosine            5.5         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mannan-binding lectin serine protease 1 isoform 3 [H... 
MASP1                 0.962   mannan-binding lectin serine protease 1 isoform 2 pr...
MASP1                 0.962   mannan-binding lectin serine protease 1 isoform 1 pr...
MASP2                 0.467   mannan-binding lectin serine protease 2 isoform 1 pr...
C1R                   0.359   complement component 1, r subcomponent 
C1S                   0.327   complement component 1, s subcomponent precursor [Hom...
C1S                   0.327   complement component 1, s subcomponent precursor [Ho...
MASP2                 0.233   mannan-binding lectin serine protease 2 isoform 2 pr...
BMP1                  0.188   bone morphogenetic protein 1 isoform 3 precursor [Hom...
TLL2                  0.185   tolloid-like 2 
TLL1                  0.182   tolloid-like 1 
BMP1                  0.164   bone morphogenetic protein 1 isoform 1 precursor [Hom...
BMP1                  0.156   bone morphogenetic protein 1 isoform 2 precursor [Hom...
CSMD3                 0.110   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.110   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.110   CUB and Sushi multiple domains 3 isoform 1 
CUBN                  0.102   cubilin 
CSMD1                 0.098   CUB and Sushi multiple domains 1 
NRP2                  0.092   neuropilin 2 isoform 3 precursor 
NRP2                  0.092   neuropilin 2 isoform 5 precursor 
NRP2                  0.092   neuropilin 2 isoform 1 precursor 
NRP2                  0.092   neuropilin 2 isoform 6 precursor 
NRP2                  0.092   neuropilin 2 isoform 4 precursor 
NRP2                  0.092   neuropilin 2 isoform 2 precursor 
NRP1                  0.091   neuropilin 1 isoform c 
NRP1                  0.091   neuropilin 1 isoform b 
NRP1                  0.091   neuropilin 1 isoform a 
CSMD2                 0.091   CUB and Sushi multiple domains 2 
CDCP2                 0.091   CUB domain containing protein 2 
PCOLCE2               0.086   procollagen C-endopeptidase enhancer 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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