Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 148806881
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148806881 hypothetical protein LOC57608 [Homo sapiens]
(1359 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148806881 hypothetical protein LOC57608 [Homo sapiens] 2786 0.0
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 76 3e-13
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 51 9e-06
gi|55741677 SET domain containing 1A [Homo sapiens] 49 3e-05
gi|150418009 transforming, acidic coiled-coil containing protein... 47 1e-04
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens] 46 3e-04
gi|169213965 PREDICTED: similar to hCG1645909 [Homo sapiens] 45 5e-04
gi|239751822 PREDICTED: similar to hCG1645909 [Homo sapiens] 45 5e-04
gi|239746313 PREDICTED: similar to hCG1645909 [Homo sapiens] 45 5e-04
gi|50962882 G patch domain containing 8 [Homo sapiens] 45 5e-04
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 45 6e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 44 8e-04
gi|66529407 tensin [Homo sapiens] 44 8e-04
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 44 0.001
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 44 0.001
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 44 0.001
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 43 0.002
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 43 0.002
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 42 0.003
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 42 0.005
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 42 0.005
gi|27262645 ataxin 2 related protein isoform B [Homo sapiens] 42 0.005
gi|27262649 ataxin 2 related protein isoform C [Homo sapiens] 42 0.005
gi|27262647 ataxin 2 related protein isoform A [Homo sapiens] 42 0.005
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 41 0.007
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 41 0.007
gi|28559039 mediator complex subunit 1 [Homo sapiens] 41 0.007
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 41 0.007
gi|145386517 phostensin [Homo sapiens] 41 0.007
gi|199559805 phostensin [Homo sapiens] 41 0.007
>gi|148806881 hypothetical protein LOC57608 [Homo sapiens]
Length = 1359
Score = 2786 bits (7222), Expect = 0.0
Identities = 1359/1359 (100%), Positives = 1359/1359 (100%)
Query: 1 MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS 60
MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS
Sbjct: 1 MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS 60
Query: 61 AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR 120
AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR
Sbjct: 61 AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR 120
Query: 121 QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK 180
QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK
Sbjct: 121 QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK 180
Query: 181 WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES 240
WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES
Sbjct: 181 WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES 240
Query: 241 LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS 300
LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS
Sbjct: 241 LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS 300
Query: 301 HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED 360
HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED
Sbjct: 301 HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED 360
Query: 361 TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF 420
TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF
Sbjct: 361 TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF 420
Query: 421 VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL 480
VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL
Sbjct: 421 VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL 480
Query: 481 IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ 540
IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ
Sbjct: 481 IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ 540
Query: 541 VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN 600
VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN
Sbjct: 541 VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN 600
Query: 601 NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ 660
NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ
Sbjct: 601 NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ 660
Query: 661 TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP 720
TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP
Sbjct: 661 TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP 720
Query: 721 KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG 780
KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG
Sbjct: 721 KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG 780
Query: 781 RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK 840
RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK
Sbjct: 781 RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK 840
Query: 841 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE 900
ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE
Sbjct: 841 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE 900
Query: 901 SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLE 960
SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLE
Sbjct: 901 SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLE 960
Query: 961 VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR 1020
VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR
Sbjct: 961 VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR 1020
Query: 1021 KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE 1080
KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE
Sbjct: 1021 KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE 1080
Query: 1081 SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV 1140
SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV
Sbjct: 1081 SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV 1140
Query: 1141 STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF 1200
STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF
Sbjct: 1141 STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF 1200
Query: 1201 FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM 1260
FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM
Sbjct: 1201 FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM 1260
Query: 1261 RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV 1320
RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV
Sbjct: 1261 RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV 1320
Query: 1321 SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV 1359
SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
Sbjct: 1321 SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV 1359
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 75.9 bits (185), Expect = 3e-13
Identities = 288/1388 (20%), Positives = 465/1388 (33%), Gaps = 177/1388 (12%)
Query: 20 PASREDNPKGRQAARTGTRAGQGLQNGHEDGPAAL----AHRKTSAGKGHVSDSESRRST 75
PA R + R AR G + + G + + +H +T +G S R++
Sbjct: 674 PARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNK 733
Query: 76 PRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGRQEARSQKPREHENLE 135
R +++S + + S S P + R S P++
Sbjct: 734 SRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTP 793
Query: 136 ARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAKWQNVSLESWNQPRKL 195
R S P P S K + R S + + ++S PR+
Sbjct: 794 PRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQG 853
Query: 196 GRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPESLSCTEIPIPLNERHS 255
+ + + + +++ SR SP + + P R S
Sbjct: 854 SITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPP-----RQS 908
Query: 256 PKMPPYPPTCAPNLDSTRNSEKSGCSAPFPR-------PKFGRPLKPPS-YSSHQQSRGG 307
P P + S R SG S+P P P+ R + P S S R
Sbjct: 909 PSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYS 968
Query: 308 ADSSDSQDSQQMDAYVPRHELCLS-DPGLEPPVYVPP-PSYRSPPQNIPNPYLEDTVPIN 365
S S D++ PR S P + PP PS P +D++
Sbjct: 969 HSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSKSPCPQEKSKDSLV-- 1026
Query: 366 VCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGL----PAHPRPVTAYDGFV 421
Q P + +G S PPG + +GVS +G P H ++ + V
Sbjct: 1027 -------QSCPGSLSLCAGVKSSTPPGE-SYFGVSSLQLKGQSQTSPDHRSDTSSPE--V 1076
Query: 422 QYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVT----------------AQEPAH 465
+ + P L+ P+G +S +SSPVT A
Sbjct: 1077 RQSHSESPSLQSKSQTSPKG--------GRSRSSSPVTELASRSPIRQDRGEFSASPMLK 1128
Query: 466 GGMQPDGAIWNPQSLIPPSGDERGLV----LADSSPRWLWGQPPGDGENSGLPNQRDRCV 521
GM P+ + + S P+ D L+ L + + PP + + P Q+D+
Sbjct: 1129 SGMSPEQSRFQSDSSSYPTVDSNSLLGQSRLETAESKEKMALPPQEDATASPPRQKDKFS 1188
Query: 522 ARGQWPDVRGSQ-HGHTGRQVSSPYSQGESTCETQTKLKKFQTGTRTKKSSK--KKMNET 578
S T R S S+ ET+ + T ++ ++ + +K E
Sbjct: 1189 PFPVQDRPESSLVFKDTLRTPPRERSGAGSSPETKEQNSALPTSSQDEELMEVVEKSEEP 1248
Query: 579 IFCLVSIPVKSESHLPDRDMDNNDLKPSADQKNGSDKSPALQ---EQSLLSMSSTDLELQ 635
++S S L + N + P +++ PA+ +QS S +E+
Sbjct: 1249 AGQILS---HLSSELKEMSTSNFESSPEVEER------PAVSLTLDQSQSQASLEAVEVP 1299
Query: 636 ALTGSMGG-----------RTEFQKQDLGEPEEDRQTNDLSF-IHLTKHRELKHSGSWPG 683
++ S GG + ++ G P E R + L ++ E+K + P
Sbjct: 1300 SMASSWGGPHFSPEHKELSNSPLRENSFGSPLEFRNSGPLGTEMNTGFSSEVKEDLNGPF 1359
Query: 684 HRYR------DQQTQTSFSEEPQSSQLLPGA--KLGGPSRAALSPKCSD-----PAASEA 730
D + Q++ S SS+L P A K G S ++S D P+ +
Sbjct: 1360 LNQLETDPSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERS 1419
Query: 731 QTHTAFPTGDHKQR-PSARNLKGHRSLSPSSNSAFSRTSLS------VDQAPTPKAGRSQ 783
+ ++ D R PS R+ G + SR SLS D TP GRS+
Sbjct: 1420 SSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSE 1479
Query: 784 PCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQ---------FLLKPVSRRPWDLISQ 834
C A P R + + N+K L Q K V+R P S+
Sbjct: 1480 -CDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSR 1538
Query: 835 LESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEM----RV 890
S ++EL + +S S S SS +S+A+ + R R G+SPE+ R+
Sbjct: 1539 SGS-SQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRS------GSSPEVDSKSRL 1591
Query: 891 EPQPRMWVPESPVCR-----SGRGESKSESWSEELQPGHPRAWP-------PSPGRFRVE 938
P+ R SP + + R +S S+S E P PRA P S GR
Sbjct: 1592 SPR-RSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPA-PRALPRRSRSGSSSKGRGPSP 1649
Query: 939 EGGGAPFCSADGSTSAEKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPRE 998
EG + S + + + + S P R SSRSS A R
Sbjct: 1650 EGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRS 1709
Query: 999 PQESPKITSAFS-------SVKPSEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSV 1051
SP+ S SV E + S R A P + + RG S P +
Sbjct: 1710 ASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRS-PSPKPR 1768
Query: 1052 GLTPGQEQGASEL-------EGSLGEASTIEIPPGESLQARAARILGIEVAVESLLPGIR 1104
GL + + E + S ST ++R R S P +
Sbjct: 1769 GLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQ 1828
Query: 1105 RAGQNQPAEPDASACTPESPQEELLSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRD 1164
+ + + TP + ++ SR +PA R + A + +++PL R
Sbjct: 1829 ESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRS 1888
Query: 1165 SARRAPQAFEHSDVDGVVTSTDPVPEPEP----------SPLESKFFEQKDVETKPPFRS 1214
+R +P + S VT P P+ + + T+ RS
Sbjct: 1889 RSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRS 1948
Query: 1215 TLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLMRMKEVSSVSRMRVL 1274
RTP V R R+P + + + RR R + S SR +
Sbjct: 1949 -------RTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPV 2001
Query: 1275 SFRNADSQ 1282
+ R + S+
Sbjct: 2002 TRRRSRSR 2009
Score = 51.6 bits (122), Expect = 5e-06
Identities = 196/941 (20%), Positives = 306/941 (32%), Gaps = 152/941 (16%)
Query: 478 QSLIPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQH--- 534
+S PP G S P+ PP +S P + + + S H
Sbjct: 789 KSQTPPRRSRSG----SSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKV 844
Query: 535 --GHTGRQVSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESH 592
G RQ S Q T + F++ + S+ + C S P + +S
Sbjct: 845 KSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHS--CSGSSPPRVKSS 902
Query: 593 LPDRDMDNNDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDL 652
P R + P K + SP + S S S T
Sbjct: 903 TPPRQSPSRSSSPQPKVK--AIISPRQRSHSGSSSPSPSRVTSRTT-------------- 946
Query: 653 GEPEEDRQTNDLSFIHLTKHRELKHSGSW-PGHRYRD-----QQTQTSFSEEPQ-SSQLL 705
P R + S + HSGS P + + Q S S P+ +Q
Sbjct: 947 --PRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTP 1004
Query: 706 PGAKLGGP--------SRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLS 757
PG L G S+ +L C + A ++ P G+ S+ LKG S
Sbjct: 1005 PGPSLSGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTS 1064
Query: 758 PSSNSAFSRTSLSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFG 817
P S S + + +P G P E+ P +Q G
Sbjct: 1065 PDHRSDTSSPEVRQSHSESPSLQSKSQTSPKGGRSRSSSPVTELASRSPI-----RQDRG 1119
Query: 818 QFLLKPVSR---RPWDLISQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHC 874
+F P+ + P Q +S + + S ++ S+E A P QE+
Sbjct: 1120 EFSASPMLKSGMSPEQSRFQSDSSSYPTVDSNSLLGQSRLETAESKEKMALPPQEDATAS 1179
Query: 875 --RQED------VGFRGNS-----PEMRVEPQPRMWVPESPVCRSGRGESKSESWSEELQ 921
RQ+D V R S +R P+ R SP + + S EEL
Sbjct: 1180 PPRQKDKFSPFPVQDRPESSLVFKDTLRTPPRERSGAGSSPETKEQNSALPTSSQDEEL- 1238
Query: 922 PGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLEVSN-----GMDELAGSPFPVT 976
V E P S+E + + SN ++E +
Sbjct: 1239 -------------MEVVEKSEEPAGQILSHLSSELKEMSTSNFESSPEVEERPAVSLTLD 1285
Query: 977 RMSSRSS-DAKPLPA--------SYPAEPREPQESPKITSAFSSVKPSEAVPRKFDSGGE 1027
+ S++S +A +P+ + E +E SP ++F S P +F + G
Sbjct: 1286 QSQSQASLEAVEVPSMASSWGGPHFSPEHKELSNSPLRENSFGS-------PLEFRNSGP 1338
Query: 1028 RGAGLPLSLSNK-NRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGESLQARA 1086
G + S++ L+ P L + P + S G +S+ E+ P +A
Sbjct: 1339 LGTEMNTGFSSEVKEDLNGPFLNQLETDPSLDMKEQSTRSS-GHSSS-ELSPDAVEKAGM 1396
Query: 1087 ARILGIEVAVESLLPGI----RRAGQNQPAEPDASACTPE----------------SPQE 1126
+ I V +P R + + P D TP +P
Sbjct: 1397 SSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSR 1456
Query: 1127 ELLSRPAPA--DVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTS 1184
LS +P D+PR + GR +C + P + + P+ S + +
Sbjct: 1457 HSLSGSSPGMKDIPRTPS---RGRSECDSSPEP------KALPQTPRPRSRSPSSPELNN 1507
Query: 1185 TDPVPEPEPSPLESKFFEQKDVETKP---PFRSTLFHFVERTPSVAGSEKRLRSPSKVIE 1241
P+ E S ES +QK V P RS ++ PS + E RS S
Sbjct: 1508 KCLTPQRERSGSESS-VDQKTVARTPLGQRSRSGSSQELDVKPSASPQE---RSESDSSP 1563
Query: 1242 SLQEKLASPPRRADPDRLMRMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGG 1301
+ K +P R+ R EV S SR+ R+ S E ++ +A R Q+G
Sbjct: 1564 DSKAKTRTPLRQR--SRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSS 1621
Query: 1302 ----LVSPGSGDRAQRLGHSL-----SVSKDSISREEKEHP 1333
+P + R R G S S S + EHP
Sbjct: 1622 PEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHP 1662
Score = 45.4 bits (106), Expect = 4e-04
Identities = 79/340 (23%), Positives = 113/340 (33%), Gaps = 86/340 (25%)
Query: 705 LPGAKLGGP-----SRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPS 759
L GA L P + +S + S P A++ T PS + R+ SPS
Sbjct: 2375 LSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTP------PSAPSQSRMTSERAPSPS 2428
Query: 760 SN----------------------SAFSRTSLSVDQAPTPKAGRSQ-----PCVDVHGLG 792
S SAFS S + TP AG G
Sbjct: 2429 SRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAG 2488
Query: 793 AHPG---------PKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNKELQ 843
H G P +V GEP ++Q L+P R S S +
Sbjct: 2489 DHNGMLSVPAPGVPHSDV--GEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSS 2546
Query: 844 EEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPESPV 903
SSSSSS SSSS E + P Q PE+ ++ P
Sbjct: 2547 SSSSSSSSSSGSSSSDSEGSSLPVQ-----------------PEVALKRVP--------- 2580
Query: 904 CRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLEVSN 963
S + + E ++ G P P+P + R + S+ S+S+ S+
Sbjct: 2581 -------SPTPAPKEAVREGRPP--EPTPAK-RKRRSSSSSSSSSSSSSSSSSSSSSSSS 2630
Query: 964 GMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESP 1003
+ S + SS S AKP P + P +P P++ P
Sbjct: 2631 SSSSSSSSSSSSSSSSSSPSPAKPGPQALP-KPASPKKPP 2669
Score = 41.6 bits (96), Expect = 0.005
Identities = 255/1291 (19%), Positives = 420/1291 (32%), Gaps = 219/1291 (16%)
Query: 13 YKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTSAGKGHVSDSESR 72
Y L R+ +SR PK ++ + R + E +K+S K H S+SES+
Sbjct: 171 YSLVRESSSSRSPTPKQKKKKKKKDRGRRS-----ESSSPRRERKKSSKKKKHRSESESK 225
Query: 73 RSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGRQEARSQKPREHE 132
+ R H P S ++ + + + S+ P + +A+R A S
Sbjct: 226 K---RKHRSPTPKSKRKSKD----KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSR 278
Query: 133 NLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAKWQNVSLESWNQP 192
+ A A+ H+ + GRS E + S P S + + P
Sbjct: 279 SRSA--AAKTHTT---------ALAGRSPSPASGRRGEGDAPFSEPG---TTSTQRPSSP 324
Query: 193 RKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPESLSCTEIPIP--- 249
+Q S ++ + K KS + P S + E P P
Sbjct: 325 ETATKQPSSPYEDK---------------DKDKKEKSATRPSPSPERSSTGPEPPAPTPL 369
Query: 250 LNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSSHQQSRGGAD 309
L ERH P T P P+ PPS +S + R
Sbjct: 370 LAERHGGSPQPLATT----------------------PLSQEPVNPPSEASPTRDRSPPK 407
Query: 310 SSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLEDTVPINVCGG 369
S + +P+ S P P V + SP E P G
Sbjct: 408 SPEK---------LPQSSSSESSPPSPQPTKVSRHASSSP---------ESPKPAPAPGS 449
Query: 370 HSQ-QQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGFVQYIPFDD 428
H + SPT K + G+ + +P G P TA G
Sbjct: 450 HREISSSPTSKNRSHGRAK-----RDKSHSHTPSRRMG--RSRSPATAKRG--------- 493
Query: 429 PRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSLIPPSGDER 488
R R + K +S + Q Q G +PQ R
Sbjct: 494 -RSRS-------------RTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQ--------RR 531
Query: 489 GLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHT----GRQVSSP 544
G + P W + + + G R + + P RG T GR S
Sbjct: 532 GRSRSPQRPGWSRSR---NTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRT 588
Query: 545 YSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPV--KSESHLPDRDMDNND 602
++ S T T+ + + S+ + PV +S S P R +
Sbjct: 589 PARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSR 648
Query: 603 LKPSADQKNGSDKSPALQEQS-LLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQT 661
+ A + ++PA + +S + + ++ T + GR+ + G R
Sbjct: 649 SRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGR-SRSRSL 707
Query: 662 NDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSPK 721
H + SGS R +T S S ++ SR+ SP+
Sbjct: 708 VRRGRSHSRTPQRRGRSGS-SSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPR 766
Query: 722 CSDPAASEAQTHTAFPTGDHKQR---PSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPK 778
+ + + + KQ+ P R+ G S P + S +P PK
Sbjct: 767 SKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSG--SSQPKAKSRTPPRRSRSSSSPPPK 824
Query: 779 AGRSQPCVDVHGLGAHPGPKREVVKGEP--TGPCNSKQLFGQFLLKPVSRRPWDLISQLE 836
P H + P PK V G P G S Q Q + P R ++
Sbjct: 825 QKSKTPSRQSHS-SSSPHPK--VKSGTPPRQGSITSPQANEQ-SVTPQRRSCFE-----S 875
Query: 837 SFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRM 896
S + EL+ S S S SS +S P+Q SP PQP++
Sbjct: 876 SPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQ----------------SPSRSSSPQPKV 919
Query: 897 WVPESPVCRSGRGES--KSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSA 954
SP RS G S + P R+ P E P S GS+S
Sbjct: 920 KAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSN----VESRLLPRYSHSGSSSP 975
Query: 955 EKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKP 1014
+ + + +GS P ++ +++ L S P+E + + S S+
Sbjct: 976 DTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSKSPCPQEKSKDSLVQSCPGSLSL 1035
Query: 1015 SEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTI 1074
V + GE G+ SL K + ++PD RS + + E+ S E+ ++
Sbjct: 1036 CAGV-KSSTPPGESYFGVS-SLQLKGQSQTSPDHRS-------DTSSPEVRQSHSESPSL 1086
Query: 1075 EIPPGESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAP 1134
+ S + +R + S P + G+ + S +PE + + S
Sbjct: 1087 QSKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSASPMLKSGMSPEQSRFQSDS---- 1142
Query: 1135 ADVPRVSTDAFYG--RRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPE 1192
+ P V +++ G R + +K + + ++ A +P P
Sbjct: 1143 SSYPTVDSNSLLGQSRLETAESKEKMALPPQEDATASP--------------------PR 1182
Query: 1193 PSPLESKFFEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPR 1252
S F Q E+ F+ TL RTP R RS + +E+ ++ P
Sbjct: 1183 QKDKFSPFPVQDRPESSLVFKDTL-----RTP------PRERSGAGSSPETKEQNSALPT 1231
Query: 1253 RADPDRLMRMKEVSSVSRMRVLSFRNADSQE 1283
+ + LM + E S ++LS +++ +E
Sbjct: 1232 SSQDEELMEVVEKSEEPAGQILSHLSSELKE 1262
Score = 39.7 bits (91), Expect = 0.020
Identities = 67/277 (24%), Positives = 95/277 (34%), Gaps = 54/277 (19%)
Query: 725 PAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAGRSQP 784
PA++ AQ +A + + + S S SS+S+ S +S S + + G S P
Sbjct: 2510 PASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLP 2569
Query: 785 CVDVHGL----GAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK 840
L P PK V +G P P +K+
Sbjct: 2570 VQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRK------------------------- 2604
Query: 841 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPR-MWVP 899
+ SSSSSSSSSSSS S + + + +S +P P+ + P
Sbjct: 2605 --RRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKP 2662
Query: 900 ESPV--------CRSGRG--ESKSESWSEELQPGHPRAWPPSPG----RFRVEEGGGAPF 945
SP RS R +S +S S P R P P + E G
Sbjct: 2663 ASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRG 2722
Query: 946 CSADGSTSAEKRHLEVSNGMDELAGSPFPVTRMSSRS 982
D + + KR E SP P+ SSRS
Sbjct: 2723 QRGDSRSPSHKRRRETP--------SPRPMRHRSSRS 2751
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 50.8 bits (120), Expect = 9e-06
Identities = 84/381 (22%), Positives = 128/381 (33%), Gaps = 56/381 (14%)
Query: 836 ESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPR 895
ES E QE EE++ + + E + E A EDV + E+ VE Q
Sbjct: 1934 ESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDV----EALEVEVETQEA 1989
Query: 896 MW--VPESPVCRSGRGESKSESWSEELQPGHP--RAWPPSPGRFRVE--------EGGGA 943
PES + E + + EE QP A P S G E EG
Sbjct: 1990 EGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQ 2049
Query: 944 PFCSADGSTSAEKRHLEVSNGMDELAGSPFPVTR-MSSRSSDAKPLPASYPAE-PREPQE 1001
P + AE+ E + E G P + + ++ ++ + P S E P E
Sbjct: 2050 PESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGE 2109
Query: 1002 SPKITSAFSSVKPSEAVPRK--FDSGGERGAGLPLS---LSNKNRGLSAPDLRSVGLTPG 1056
+ K + EA P ++ G P S + G + P+ +
Sbjct: 2110 AQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEA 2169
Query: 1057 QEQGASELEGSLGEASTIEIPPGESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDA 1116
+E+ ELEG +E P E E ES GI A+P+
Sbjct: 2170 EEEAQPELEG-------VEAPEAEG-----------EAQPES--EGIEAPEAEGEAQPEL 2209
Query: 1117 SACTPESPQEELLSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARR-APQ-AFE 1174
+EE P + P +A P G+ ++ +PQ +
Sbjct: 2210 EGVEAPEAEEEAQPEPEGVETPEAEGEA-----------QPESEGETQGEKKGSPQVSLG 2258
Query: 1175 HSDVDGVVTSTDPVPEPEPSP 1195
+ S+ PVPE P+P
Sbjct: 2259 DGQSEEASESSSPVPEDRPTP 2279
Score = 40.0 bits (92), Expect = 0.015
Identities = 59/248 (23%), Positives = 89/248 (35%), Gaps = 24/248 (9%)
Query: 841 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE 900
E Q E E + + + ESE E + E G +PE E QP E
Sbjct: 1866 EAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEG--AEAPEAEKEAQPE---TE 1920
Query: 901 SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLE 960
S GE + ES E Q A + EG P S AE+
Sbjct: 1921 SVEALETEGEDEPESEGAEAQEAEEAA--------QEAEGQTQPESEVIESQEAEEEAQP 1972
Query: 961 VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKP-SEAVP 1019
S ++ L + ++ ++ + P S E P+ ++ A +P S+ V
Sbjct: 1973 ESEDVEALE------VEVETQEAEGEAQPESEDVE--APEAEGEMQEAEEEAQPESDGVE 2024
Query: 1020 RKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPG 1079
+ S GE + + K G + P+ V P E+ A E EG + EA P
Sbjct: 2025 AQPKSEGEEAQEVE-GETQKTEGDAQPESDGVE-APEAEEEAQEAEGEVQEAEGEAHPES 2082
Query: 1080 ESLQARAA 1087
E + A+ A
Sbjct: 2083 EDVDAQEA 2090
Score = 35.0 bits (79), Expect = 0.49
Identities = 114/597 (19%), Positives = 192/597 (32%), Gaps = 93/597 (15%)
Query: 21 ASREDNPKGRQAARTGTRAGQ-----GLQNGHEDG-----------PAALAHRKTSAGKG 64
+ EDN +G AA GQ G++ +G P A + + G+
Sbjct: 1808 SGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEA 1867
Query: 65 HVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWS--------SHPPTGNDQAYR 116
+ G +P+S T EA + QP S + + P T + +A
Sbjct: 1868 QPESEDVEAPEAEGEAQPESEDV-ETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALE 1926
Query: 117 RRGRQEARSQ----KPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEE 172
G E S+ + E EA G Q S + +E E SE V V E
Sbjct: 1927 TEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVET 1986
Query: 173 LRMSGPAKWQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSL 232
G A+ ++ +E+ ++ + E + P +GE + +G+++
Sbjct: 1987 QEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEA--QEVEGETQKT 2044
Query: 233 PRVLSPES---------LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAP 283
PES E + E P A + E G AP
Sbjct: 2045 EGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAP 2104
Query: 284 FPRPKFGRP---LKPPSYSSHQQSRGGADSSDSQ-----DSQQMDAYVPRHELCLSDPGL 335
+ + P + Q G ++ +++ +S+ ++A E G+
Sbjct: 2105 EAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGI 2164
Query: 336 EPPVYVPPPSYRSPPQNIPNPYLEDTVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGN 395
E + P LE V ++ ++ E G G
Sbjct: 2165 E----------AQEAEEEAQPELE-----GVEAPEAEGEAQPESEGIEAPEAEGEAQPEL 2209
Query: 396 EYGVSPRLPQGLPAHPRPVTAYDGFVQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNS 455
E +P + P V + + P + + K PQ D + ++ S +S
Sbjct: 2210 EGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQGEKKGSPQVSLGDGQSEEASESS 2269
Query: 456 SPVTAQE----PAHGGMQPDGAIWNPQSLIPPSGDERGLVLADSSPRWLWGQP-PGDGEN 510
SPV P+ GG P P S PS SS WG D EN
Sbjct: 2270 SPVPEDRPTPPPSPGGDTPH---QRPGSQTGPS----------SSRASSWGNCWQKDSEN 2316
Query: 511 SGLPNQRDRCVARGQWPDVRGSQHGHTGRQVSSPYSQGESTCETQTKLKKFQTGTRT 567
D + + PD + + H R+ + Y + ++ + + L G+RT
Sbjct: 2317 -------DHVLGDTRSPDAKSTGTPHAERKATRMYPESSTSEQEEAPL-----GSRT 2361
Score = 33.5 bits (75), Expect = 1.4
Identities = 57/233 (24%), Positives = 85/233 (36%), Gaps = 45/233 (19%)
Query: 833 SQLESFNKELQEEEESSSSSSSSSSSSE-ESEAEPQQEN------RAHCRQEDVGFRGNS 885
+Q ES E QE EE + + E E EA+P+ E + E G
Sbjct: 2157 AQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPE 2216
Query: 886 PEMRVEPQPR-MWVPE-------------------SPVCRSGRGESKSESWSEELQPGHP 925
E +P+P + PE SP G G+S+ S S P
Sbjct: 2217 AEEEAQPEPEGVETPEAEGEAQPESEGETQGEKKGSPQVSLGDGQSEEASESSSPVPEDR 2276
Query: 926 RAWPPSPG------RFRVEEGGGAPFCSADGS---TSAEKRHL--EVSNGMDELAGSPF- 973
PPSPG R + G + S+ G+ +E H+ + + + G+P
Sbjct: 2277 PTPPPSPGGDTPHQRPGSQTGPSSSRASSWGNCWQKDSENDHVLGDTRSPDAKSTGTPHA 2336
Query: 974 --PVTRMSSRSSDAK----PLPASYPAEPREPQESPKITSAFSSVKPSEAVPR 1020
TRM SS ++ PL + P + + A S+ P+EAV R
Sbjct: 2337 ERKATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQEDQALGSLAPTEAVGR 2389
Score = 31.2 bits (69), Expect = 7.1
Identities = 94/381 (24%), Positives = 126/381 (33%), Gaps = 54/381 (14%)
Query: 690 QTQTSFSEEPQSSQLLPGAKLGGPSRAALSPKCSDPAASEAQTHTAFP---TGDHKQRP- 745
+TQ S + P SS LP L G S A ++P S H A GD R
Sbjct: 712 RTQASGNLRPPSSGSLPSQDLLGTSSATVTPAVHSDFVSGVSPHNAPSAGWAGDAGSRTC 771
Query: 746 SARNLKGHRSLSPSSNSAFSRTSLSVDQAPTP--------KAGR-SQPCVDVHGLGAHPG 796
S + H S S S + A SL + TP + GR Q V H
Sbjct: 772 SPAPIPPHTSDSCSKSGA---ASLGEEARDTPQPSSPLVLQVGRPEQGAVGPHRSHCCSQ 828
Query: 797 PKREVVKGEPTGPC-NSKQLFGQFLLKPVSRRPWDLISQLESFNKELQEEEESSSSSSSS 855
P + + GP + L G++ P RP + SSS S
Sbjct: 829 PGTQPAQEAQRGPSPEASWLCGRYCPTPPRGRPC----------------PQRRSSSCGS 872
Query: 856 SSSSEESEA-----EPQQENRAHCRQEDVGFRGNSPEMRVEPQ--PRMWVPESPVCRSGR 908
+ SS +S A PQ+ R G + Q + E RSG
Sbjct: 873 TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRGLSEEKTLRSGG 932
Query: 909 GESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCS----ADGSTSAE---KRHLEV 961
G E S PR+ P + R ++ P AD +T A R EV
Sbjct: 933 GPQGQEEASGVSPSSLPRSSPEAVVREWLDNIPEEPILMTYELADETTGAAGGGLRGPEV 992
Query: 962 SNGMD---ELAGSPFPVTRMS---SRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPS 1015
G D E G P + S D +P A + PQ + + S
Sbjct: 993 DPGDDHSLEGLGEPAQAGQQSLEGDPGQDPEPEGALLGSSDTGPQSGEGVPQGAAPEGVS 1052
Query: 1016 EAVPRKFDSGGERGAGLPLSL 1036
EA P + + E AG +SL
Sbjct: 1053 EA-PAEAGADREAPAGCRVSL 1072
Score = 30.8 bits (68), Expect = 9.2
Identities = 62/246 (25%), Positives = 90/246 (36%), Gaps = 46/246 (18%)
Query: 834 QLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQ-EDVGFRGNSPEMRVEP 892
Q E+ E + EE ++E+E E QQE A + E+ G G E V+
Sbjct: 1316 QEEAVQLEETKTEEGLQEEGVQLEETKETEGEGQQEEEAQLEEIEETGGEGLQEE-GVQL 1374
Query: 893 QPRMWVPESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGST 952
+ PE + +GE+ E EE P G +E A S DG
Sbjct: 1375 EEVKEGPEGGL----QGEALEEGLKEE--------GLPEEGSVHGQELSEAS--SPDGKG 1420
Query: 953 SAEKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSV 1012
S E ++ +E AG S+ A+P PA EP EP S S
Sbjct: 1421 SQEDDPVQ-----EEEAGRA---------SASAEPCPAEGTEEPTEP------PSHLSET 1460
Query: 1013 KPSEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEAS 1072
PS + + SG + GL K G + P QGA+E S+ ++
Sbjct: 1461 DPSAS---ERQSGSQLEPGL-----EKPPGATMMGQEHTQAQP--TQGAAERSSSVACSA 1510
Query: 1073 TIEIPP 1078
++ P
Sbjct: 1511 ALDCDP 1516
Score = 30.8 bits (68), Expect = 9.2
Identities = 70/328 (21%), Positives = 117/328 (35%), Gaps = 62/328 (18%)
Query: 845 EEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPESPV- 903
E+E + S++ S EE+E E C E + SP + P+ M P+
Sbjct: 1634 EDEPALSTALGSQLGEEAEGEE------FCPCEACVRKKVSP---MSPKATMGATRGPIK 1684
Query: 904 --------CRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAE 955
+ RGE ++ + E+ PG P S + EGG P
Sbjct: 1685 EAFDLQQILQRKRGEH-TDGEAAEVAPGKTHTDPTSTRTVQGAEGGLGP----------- 1732
Query: 956 KRHLEVSNGMDELAGSPFPVTRMSSRSSDAK--PLPASYPAEPREPQESPKITSAFSSV- 1012
L G+DE G ++ +R D K A+ RE + TSA S +
Sbjct: 1733 --GLSQGPGVDE--GEDGEGSQRLNRDKDPKLGEAEGDAMAQEREGKTHNSETSAGSELG 1788
Query: 1013 ---KPSEAVPRKFDSGGERGAGLPLSL--------------SNKNRGLSAPDLRSVGLTP 1055
+ E + + ++GG+ G+G +L S+ G+ AP+
Sbjct: 1789 EAEQEGEGISERGETGGQ-GSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQPE 1847
Query: 1056 GQEQGASELEGSLGEASTIEIPPGESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPD 1115
+ A E EG EA P E ++A A E + + +P+
Sbjct: 1848 SEGVEAPEAEGDAQEAEGEAQPESEDVEAPEA-----EGEAQPESEDVETPEAEWEVQPE 1902
Query: 1116 ASACTPESPQEELLSRPAPADVPRVSTD 1143
+ E+P+ E ++P V + T+
Sbjct: 1903 SEGA--EAPEAEKEAQPETESVEALETE 1928
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 49.3 bits (116), Expect = 3e-05
Identities = 78/306 (25%), Positives = 102/306 (33%), Gaps = 43/306 (14%)
Query: 830 DLISQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMR 889
D S ES + SSSSSSSSSSSS ES +E ++E + SP R
Sbjct: 1028 DSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEE-----EERPAALPSASPPPR 1082
Query: 890 VEPQPRMWVPESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSAD 949
P P E PV G + +E P P A P + +
Sbjct: 1083 EVPVPTPAPVEVPVPERVAGSPVTPLPEQEASPARP-AGP-----------------TEE 1124
Query: 950 GSTSAEKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAF 1009
SA R E AG P P R R S P+P P + R S
Sbjct: 1125 SPPSAPLRPPEPP------AGPPAPAPRPDERPS--SPIPLLPPPKKRRKTVSFSAIEVV 1176
Query: 1010 SSVKPSEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQ-EQGASELEGSL 1068
+ +P A P + G P + R L V P + +G G
Sbjct: 1177 PAPEPPPATPPQAKFPGPASRKAPRGVERTIRNLPLDHASLVKSWPEEVSRGGRSRAGGR 1236
Query: 1069 GEASTIEIPPGESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEEL 1128
G + E +A + + V + L RR PA D+ A T S + E
Sbjct: 1237 GRLT-------EEEEAEPGTEVDLAVLADLALTPARRGLPALPAVEDSEA-TETSDEAE- 1287
Query: 1129 LSRPAP 1134
RP P
Sbjct: 1288 --RPRP 1291
Score = 38.5 bits (88), Expect = 0.044
Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 20/167 (11%)
Query: 270 DSTRNSEKSGCSAPFPRPKFGRPLKPPSYSSHQQSRGGADSSDSQDSQQMDAYVPRHELC 329
DST +SE S S+ S SS S SS+ ++ ++ A +P
Sbjct: 1028 DSTSDSESSSSSS-------SSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPS---- 1076
Query: 330 LSDPGLEPPVYVPPPSYRSPPQNIPNPYL-----EDTVPINVCGGHSQQQSPTEKAGASG 384
S P E PV P P P+ + + ++ P G ++SP
Sbjct: 1077 ASPPPREVPVPTPAPVEVPVPERVAGSPVTPLPEQEASPARPAG--PTEESPPSAPLRPP 1134
Query: 385 QPPSGPPGTGNEYGVSPRLPQGL--PAHPRPVTAYDGFVQYIPFDDP 429
+PP+GPP P P L P R T ++ +P +P
Sbjct: 1135 EPPAGPPAPAPRPDERPSSPIPLLPPPKKRRKTVSFSAIEVVPAPEP 1181
Score = 37.7 bits (86), Expect = 0.076
Identities = 83/375 (22%), Positives = 123/375 (32%), Gaps = 80/375 (21%)
Query: 834 QLESFNKELQEEEESSSSSSSS----SSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMR 889
+L SF + +E E S +S S+ +EE E +P+QE A + G G P R
Sbjct: 889 RLPSFKVKRKEPSEISEASEEKRPRPSTPAEEDEDDPEQEKEA----GEPGRPGTKPPKR 944
Query: 890 VEPQPR-MWVPESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSA 948
E + + GE S+ S E R
Sbjct: 945 DEERGKTQGKHRKSFALDSEGEEASQESSSEKDEEDDEEDEEDEDR-------------- 990
Query: 949 DGSTSAEKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSA 1008
+ + K+ EVS+G DE + S + + + S + S +S+
Sbjct: 991 EEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSSSSS 1050
Query: 1009 FSSVKPSEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSL 1068
SS S + + ER A LP S S R + P TP
Sbjct: 1051 SSSSSSSSESSSEDEEEEERPAALP-SASPPPREVPVP-------TP------------- 1089
Query: 1069 GEASTIEIPPGESLQARAARILGIEVA--VESLLPGIRRAGQNQPAEPDASACTPESPQE 1126
+ +E+P E R+ G V E R AG + + P A PE P
Sbjct: 1090 ---APVEVPVPE-------RVAGSPVTPLPEQEASPARPAGPTEESPPSAPLRPPEPPAG 1139
Query: 1127 ELLSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTD 1186
P P + P SP+ + RR +F +V
Sbjct: 1140 PPAPAPRPDERP----------------SSPIPLLPPPKKRRKTVSFSAIEV-------V 1176
Query: 1187 PVPEPEP-SPLESKF 1200
P PEP P +P ++KF
Sbjct: 1177 PAPEPPPATPPQAKF 1191
Score = 36.2 bits (82), Expect = 0.22
Identities = 47/179 (26%), Positives = 65/179 (36%), Gaps = 30/179 (16%)
Query: 725 PAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAGRSQP 784
PA + A T D +RP R L H L + A PTP A +P
Sbjct: 1269 PALPAVEDSEATETSDEAERP--RPLLSHILLEHNYALAVK---------PTPPAPALRP 1317
Query: 785 CVDVHGLGA-HPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNKELQ 843
V A P EV++ +++ +P L Q E +E +
Sbjct: 1318 PEPVPAPAALFSSPADEVLEAPEVVVAEAEE-----------PKPQQLQQQREEGEEEGE 1366
Query: 844 EEEESSSSSSSSSSSSEESEAEPQQEN-RAHCRQEDVGFRGNSPEMRVEPQPRMWVPES 901
EE E SS SSSS + E ++ + R+H R R P P PR + P S
Sbjct: 1367 EEGEEEEEESSDSSSSSDGEGALRRRSLRSHAR------RRRPPPPPPPPPPRAYEPRS 1419
Score = 33.5 bits (75), Expect = 1.4
Identities = 56/276 (20%), Positives = 87/276 (31%), Gaps = 36/276 (13%)
Query: 723 SDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAGRS 782
SD AA A T G+ + R +PSS F TP++ +
Sbjct: 222 SDTAAYPAGTTAVGTPGNGTPCSQDTSFSSSRQDTPSSFGQF-----------TPQSSQG 270
Query: 783 QPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNKEL 842
P G+ P + T + SRR + S + + +
Sbjct: 271 TPYTS---RGSTPYSQDSAYSSSTTSTSFKPRRSENSYQDAFSRRHFSASSASTTASTAI 327
Query: 843 QEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPESP 902
+++SSS+SSSS S + + + R D + + + P
Sbjct: 328 AATTAATASSSASSSSLSSSSSSSSSSSSSQFRSSDANYPAYYESWNRYQRHTSYPPRRA 387
Query: 903 VCRSGRGESKSESWSEELQPGHPRAWPPSPGR-----FR-----------VEEGGGAPFC 946
G +E+ +E P + PP P R +R E GGG
Sbjct: 388 TREEPPGAPFAENTAERFPPSYTSYLPPEPSRPTDQDYRPPASEAPPPEPPEPGGG---- 443
Query: 947 SADGSTSAEKRHLEVS--NGMDELAGSPFPVTRMSS 980
G S E+ + S +GSP P T S
Sbjct: 444 GGGGGPSPEREEVRTSPRPASPARSGSPAPETTNES 479
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 47.4 bits (111), Expect = 1e-04
Identities = 116/520 (22%), Positives = 171/520 (32%), Gaps = 83/520 (15%)
Query: 662 NDLSFIHLTKHRELKHSGSWPGH--RYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALS 719
N S T + S PG+ + +Q T S + + + + LGG A+ S
Sbjct: 5 NSTSDNQRTLSAQTPRSAQPPGNSQNIKRKQQDTPGSPDHRDASSIGSVGLGGFCTASES 64
Query: 720 PKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKA 779
DP + T K AR +G SP + S S+ A P
Sbjct: 65 SASLDPCLVSPEV-----TEPRKDPQGARGPEGSLLPSPPPSQEREHPSSSMPFAECPPE 119
Query: 780 GRSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFN 839
G C+ GP+ + + EP P + F + S P+ I+ + S
Sbjct: 120 G----CLASPAAAPEDGPQTQSPRREPA-PNAPGDIAAAFPAERDSSTPYQEIAAVPSAG 174
Query: 840 KELQEEEESSSSSSSSSSSSEESEA-------EPQQENRAHCRQEDVGFRGNSPEMRVEP 892
+E Q +EE SS S SS ++S EP + + GF E
Sbjct: 175 RERQPKEEGQKSSFSFSSGIDQSPGMSPVPLREPMKAPLCGEGDQPGGFESQEKEAAGGF 234
Query: 893 QPR---------MWVPESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEG-GG 942
P PE+P ES + L+P P P+P E G G
Sbjct: 235 PPAESRQGVASVQVTPEAPAAAQQGTESSAVLEKSPLKPMAPIPQDPAPRASDRERGQGE 294
Query: 943 AP------------FCSADGSTSAEKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPA 990
AP C S S EV+ E P + P PA
Sbjct: 295 APPQYLTDDLEFLRACHLPRSNSGAAPEAEVNAASQESCQQPVGAYLPHAELPWGLPSPA 354
Query: 991 SYPAEPREPQESPKI-------TSAFSSVKPSEAVPRKFDSGGERGAGLPLSLSNKNRGL 1043
P +E+ + KP++ V +GG+ GLP+S
Sbjct: 355 LVPEAGGSGKEALDTIDVQGHPQTGMRGTKPNQVV--CVAAGGQPEGGLPVS-------- 404
Query: 1044 SAPDLRSVGLTPGQEQGASELEGSLGEASTIEIP-----PGESLQARAARILGIEVA--- 1095
P L LTP +E + SL +IP PG S + ++ G+ V+
Sbjct: 405 PEPSL----LTPTEE---AHPASSLASFPAAQIPIAVEEPGSSSRESVSK-AGMPVSADA 456
Query: 1096 ----VESLLPGIRR-----AGQNQPAEPDASACTPESPQE 1126
V++ L G+ R + + E D SPQE
Sbjct: 457 AKEVVDAGLVGLERQVSDLGSKGEHPEGDPGEVPAPSPQE 496
Score = 36.6 bits (83), Expect = 0.17
Identities = 116/532 (21%), Positives = 179/532 (33%), Gaps = 129/532 (24%)
Query: 834 QLESFNKELQEEEESSSSSSSSSSS----------SEESE--AEPQQENRAHCRQEDVGF 881
Q ++ ELQ + + S + +SS +EESE A +Q+ A + G
Sbjct: 893 QEQALGSELQSQLPKGTLSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGA 952
Query: 882 RGNSPEMRVEPQPRMWVPE---------SPVCRSGRGESKSE-SWSEELQPG--HPRAWP 929
G+ RV P + + C +G+G +KS+ + ++ L+ G H A
Sbjct: 953 CGDGQSSRVSPPAADVLKDFSLAGNFSRKETCCTGQGPNKSQQALADALEEGSQHEEACQ 1012
Query: 930 PSPGRFRVEEG-----------------GGAPFCSADGSTSAEK-----RHLEVSNGMDE 967
PG +G G AP C D + S G+
Sbjct: 1013 RHPGASEAADGCSPLWGLSKREMASGNTGEAPPCQPDSVALLDAVPCLPALAPASPGVTP 1072
Query: 968 LAGSPFPVTRMSSRSSDAKPLPASYPAEPRE-----PQESPKITSAFSSVKPSEAVPRKF 1022
+P ++ +P+PA P + E ESPK+ ++F S
Sbjct: 1073 TQDAPETEACDETQEGRQQPVPA--PQQKMECWATSDAESPKLLASFPSAGEQGGEAGAA 1130
Query: 1023 DSGGERGAGLPLSLSNKNRGLSAPDLRSVG---------LTPGQEQGASELEGSLGEAST 1073
++GG GAG P K + P ++ LT G+E S L
Sbjct: 1131 ETGGSAGAGDP----GKQQAPEKPGEATLSCGLLQTEHCLTSGEEASTSALR-------- 1178
Query: 1074 IEIPPGESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRP- 1132
ES QA + ++LLP G + ++ P+E LLS P
Sbjct: 1179 ------ESCQAEHP----MASCQDALLPARELGGIPRSTMDFSTHQAVPDPKELLLSGPP 1228
Query: 1133 --APADVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDP-VP 1189
A D P + D+ R G DS +A V+S DP P
Sbjct: 1229 EVAAPDTPYLHVDSAAQR------------GAEDSGVKA------------VSSADPRAP 1264
Query: 1190 EPEPSPLESKFFEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLAS 1249
P P+ ++ + F +L ++ P AG E I ++Q S
Sbjct: 1265 GESPCPVGEPPLALENAASLKLFAGSLAPLLQ--PGAAGGE---------IPAVQASSGS 1313
Query: 1250 PPRRADPDRLMRMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGG 1301
P R + M + RM +L+ Q EE AT G G
Sbjct: 1314 PKARTTEGPVDSM---PCLDRMPLLA---KGKQATGEEKAATAPGAGAKASG 1359
Score = 31.6 bits (70), Expect = 5.4
Identities = 74/310 (23%), Positives = 105/310 (33%), Gaps = 64/310 (20%)
Query: 845 EEESSSSSSSSSSSSEESEAEPQQEN------RAHCRQEDVGFRGNSPEMRVEPQPRMWV 898
EE SSS S S + A+ +E + D+G +G PE P
Sbjct: 435 EEPGSSSRESVSKAGMPVSADAAKEVVDAGLVGLERQVSDLGSKGEHPE----GDPGEVP 490
Query: 899 PESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRH 958
SP RGE + S E+QPG P PP P E GAP
Sbjct: 491 APSP---QERGEHLNTEQSHEVQPGVPP--PPLPKEQSHEVQPGAP-------------- 531
Query: 959 LEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAV 1018
P P+ + S S+ P P A+ E SP + S P ++
Sbjct: 532 -------------PPPLPKAPSESARGPPGPTD-GAKVHEDSTSPAVAKE-GSRSPGDSP 576
Query: 1019 PRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPP 1078
K ++ G P +L + D ++ E G EL +A + + P
Sbjct: 577 GGKEEAPEPPDGGDPGNLQGE-------DSQAFSSKRDPEVGKDELSKPSSDAESRDHPS 629
Query: 1079 GESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAP--AD 1136
S A+ R G G +Q AE DAS + +E+ + P P A
Sbjct: 630 SHS--AQPPRKGG---------AGHTDGPHSQTAEADASGLPHKLGEEDPVLPPVPDGAG 678
Query: 1137 VPRVSTDAFY 1146
P V A +
Sbjct: 679 EPTVPEGAIW 688
>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 45.8 bits (107), Expect = 3e-04
Identities = 51/185 (27%), Positives = 66/185 (35%), Gaps = 21/185 (11%)
Query: 239 ESLSCTEIPIPLNERHSPKMPPYPP--TCAPNLDSTRNSEKSGCSAP-FPRPKFGRPLKP 295
E C +P P SP+ P PP T P + R + AP RP GRP
Sbjct: 30 EGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWAT 89
Query: 296 PSYSS-HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIP 354
S +S H + G+ + S +P H ++P LE P P Q P
Sbjct: 90 RSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPA--------DPAQPDP 141
Query: 355 NPYLEDTVPINVCGGHSQQQSPTEKA--GASGQPPSGPPGTGNEYGVSPR-LPQGLPAHP 411
P P QSP E+ GA+G P PP + PR P+ P
Sbjct: 142 APLSRPAPP------RPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSA 195
Query: 412 RPVTA 416
P A
Sbjct: 196 APAMA 200
Score = 31.6 bits (70), Expect = 5.4
Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 21/166 (12%)
Query: 922 PGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLEVSNGMDELAGSPF-------- 973
PG+ + P+P R R + G P+ + ++ K L E++G P
Sbjct: 68 PGNAES--PAPRRARPDLG--RPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPA 123
Query: 974 ----PVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPRKFDSGGERG 1029
P + + + P P S PA PR +SP + + PR +G +G
Sbjct: 124 QTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGA---AGGGPRTPPAGRTQG 180
Query: 1030 AGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIE 1075
P + G +AP + SV P ++ GA+ E E T+E
Sbjct: 181 QSGPRESPRASPGSAAPAMASV-RGPARD-GATRSEPHATEIRTLE 224
>gi|169213965 PREDICTED: similar to hCG1645909 [Homo sapiens]
Length = 591
Score = 45.1 bits (105), Expect = 5e-04
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 848 SSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVP---ESPVC 904
SSSSSSSSSSSSE+S++EP + R + VG G+S E + W P SP+
Sbjct: 407 SSSSSSSSSSSSEDSDSEPLWKQREDMQANPVGTPGSSE----EDEDTTWTPTRLASPLL 462
Query: 905 RSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFC 946
+ + +K + ++P + P P + G FC
Sbjct: 463 AAEKKATKGQVARAPVKPKEKKKGPCPPQMKKKCVNGFIMFC 504
>gi|239751822 PREDICTED: similar to hCG1645909 [Homo sapiens]
Length = 591
Score = 45.1 bits (105), Expect = 5e-04
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 848 SSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVP---ESPVC 904
SSSSSSSSSSSSE+S++EP + R + VG G+S E + W P SP+
Sbjct: 407 SSSSSSSSSSSSEDSDSEPLWKQREDMQANPVGTPGSSE----EDEDTTWTPTRLASPLL 462
Query: 905 RSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFC 946
+ + +K + ++P + P P + G FC
Sbjct: 463 AAEKKATKGQVARAPVKPKEKKKGPCPPQMKKKCVNGFIMFC 504
>gi|239746313 PREDICTED: similar to hCG1645909 [Homo sapiens]
Length = 591
Score = 45.1 bits (105), Expect = 5e-04
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 848 SSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVP---ESPVC 904
SSSSSSSSSSSSE+S++EP + R + VG G+S E + W P SP+
Sbjct: 407 SSSSSSSSSSSSEDSDSEPLWKQREDMQANPVGTPGSSE----EDEDTTWTPTRLASPLL 462
Query: 905 RSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFC 946
+ + +K + ++P + P P + G FC
Sbjct: 463 AAEKKATKGQVARAPVKPKEKKKGPCPPQMKKKCVNGFIMFC 504
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 45.1 bits (105), Expect = 5e-04
Identities = 140/643 (21%), Positives = 212/643 (32%), Gaps = 91/643 (14%)
Query: 485 GDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQVSSP 544
G E+ + SS L G PG+ S + G D S +G P
Sbjct: 588 GTEKPKDIGSSSKDHLQGLDPGEPNKSKEVGGEKIVRSSGGRMDAPASGSACSGLNKQEP 647
Query: 545 Y-SQGESTCETQTKL--KKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDNN 601
S G T +T L KK ++G + KKK KS H D
Sbjct: 648 GGSHGSETEDTGRSLPSKKERSGKSHRHKKKKKHK-----------KSSKHKRKHKADTE 696
Query: 602 DLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQT 661
+ A+ S K + + S + D E G + + ++D Q
Sbjct: 697 EKSSKAESGEKSKKRKKRKRKKNKSSAPADSERGPKPEPPGSGSPAPPRRRRRAQDDSQR 756
Query: 662 NDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSS-QLLPGAKLGGPSRAALSP 720
L + ++ + G G +D + E P SS Q G K S P
Sbjct: 757 RSLPAEEGSSGKKDEGGG---GSSSQDHGGRKHKGELPPSSCQRRAGTKRSSRSSHRSQP 813
Query: 721 KCSDPAASEAQTHTAFP--------------TGDHKQRPSARNLKGH-------RSLSPS 759
D + +A +H +G R +R+ + H RS S S
Sbjct: 814 SSGDEDSDDASSHRLHQKSPSQYSEEEEEEDSGSEHSRSRSRSGRRHSSHRSSRRSYSSS 873
Query: 760 SN-----SAFSRTSLSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQ 814
S+ S +SR D + + + RS+ H +H + + +
Sbjct: 874 SDASSDQSCYSRQRSYSDDSYSDYSDRSRR----HSKRSHDSDDSDYASSKHRSKRHKYS 929
Query: 815 LFGQFLLKPVSRRPWDLISQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHC 874
S+ S ++ SS S S S S + A Q +R++
Sbjct: 930 SSDDDYSLSCSQSRSRSRSHTRERSRSRGRSRSSSCSRSRSKRRSRSTTAHSWQRSRSYS 989
Query: 875 RQEDVGFRGNSPEMRVEPQPRMWVPESPVCR-SGRGE-SKSESWSEELQPGHPRAWPPSP 932
R R SP R + R W ESP R SGR + +S+ + + SP
Sbjct: 990 RDRSRSTR--SPSQRSGSRKRSWGHESPEERHSGRRDFIRSKIYRSQ-----------SP 1036
Query: 933 GRFRVEEGGGAPFCSADG------STSAEKRHLEVSNGMDELAGSPFPVTRMSSRSSDAK 986
FR G G P DG +T ++ + G GS + S AK
Sbjct: 1037 HYFRSGRGEG-PGKKDDGRGDDSKATGPPSQNSNIGTG----RGSEGDCSPEDKNSVTAK 1091
Query: 987 PLPASYPAEPREPQESPKITSAFSSVKPSEAVPR-KFDSGGERGAGLPLSLSNKNRGLSA 1045
L + R+ + P ++ + P++A P+ K G G LP SL NK
Sbjct: 1092 LLLEK--IQSRKVERKPSVSEEVQAT-PNKAGPKLKDPPQGYFGPKLPPSLGNK------ 1142
Query: 1046 PDLRSVGLTPGQ-------EQGASELEGSLGEASTIEIPPGES 1081
P L +G P E+ E ++ T E PPG S
Sbjct: 1143 PVLPLIGKLPATRKPNKKCEESGLERGEEQEQSETEEGPPGSS 1185
Score = 32.7 bits (73), Expect = 2.4
Identities = 77/355 (21%), Positives = 130/355 (36%), Gaps = 40/355 (11%)
Query: 11 HGYKLSRDPPASREDNPKGRQAARTGT---RAGQGLQNGHEDGPAALAHRKTSAGKGHVS 67
H ++ R ++D+ +G + TG + G G E G + + + K +
Sbjct: 1037 HYFRSGRGEGPGKKDDGRGDDSKATGPPSQNSNIGTGRGSE-GDCSPEDKNSVTAKLLLE 1095
Query: 68 DSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSH---PPTGNDQAYRRRGRQEA- 123
+SR+ R + A+ PP + P GN G+ A
Sbjct: 1096 KIQSRK-VERKPSVSEEVQATPNKAGPKLKDPPQGYFGPKLPPSLGNKPVLPLIGKLPAT 1154
Query: 124 -RSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAKWQ 182
+ K E LE RG Q S EGP G S+ + EE +GP
Sbjct: 1155 RKPNKKCEESGLE-RGEEQEQS---ETEEGP---PGSSDALFGHQFPSEET--TGPL--- 1202
Query: 183 NVSLESWNQPRKLGRQMSDGD----GERLFQDLYP---FIQGEHVLNSQNKGKSRSLPRV 235
L+ + K G +D G D YP I ++ + + SL
Sbjct: 1203 ---LDPPPEESKSGEATADHPVAPLGTPAHSDCYPGDPTISHNYLPDPSDGDTLESLDSS 1259
Query: 236 LSPESLSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKP 295
P + + +PI + H P P P+ P+++ST +E + + +P P +
Sbjct: 1260 SQPGPVESSLLPIAPDLEHFPSYAP--PSGDPSIESTDGAEDASLAPLESQPITFTPEEM 1317
Query: 296 PSYSSHQQSRGGADSSDSQD--SQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRS 348
YS QQ+ A Q ++Q+ A+ L + P L+ P+++ P+ S
Sbjct: 1318 EKYSKLQQA---AQQHIQQQLLAKQVKAFPASAALAPATPALQ-PIHIQQPATAS 1368
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 44.7 bits (104), Expect = 6e-04
Identities = 135/605 (22%), Positives = 196/605 (32%), Gaps = 132/605 (21%)
Query: 689 QQTQTSFSEEPQSSQLLPGAKLGGPSRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSAR 748
+ Q++F PQS +PG+ + +L +S +TH+ F Q P
Sbjct: 359 ESAQSTFEGFPQSPLQIPGSPSFSSTLLSLFQ------SSPERTHSTFE--GFPQSP--- 407
Query: 749 NLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVVKGEPTG 808
L S+FS T LS+ Q+ +P++ +S +G P
Sbjct: 408 -------LQIPMTSSFSSTLLSILQS-SPESAQS------------------AFEGFPQS 441
Query: 809 PCNS--KQLFGQFLLKPVSRRPWDLISQLESFNKELQEEEESSSSSSSSSSSSEESEAEP 866
P F LL P S E F + + SSSSSSS+ S +S E
Sbjct: 442 PLQIPVSSSFSYTLLSLFQSSPERTHSTFEGFPQSPLQIPVSSSSSSSTLLSLFQSSPEC 501
Query: 867 QQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPESPVCRSGRGESKSESWSEELQPGHPR 926
Q Q + + PE P VP P W + L P +
Sbjct: 502 TQSTFEGFPQSPLQIPQSPPEGENTHSPLQIVPSLP------------EWEDSLSPHYFP 549
Query: 927 AWPP------SPGRFRVEEGGGAPFC-------SADGSTSAEKRHLEVS--NGMDELAGS 971
PP SP F G S G S + S G D ++
Sbjct: 550 QSPPQGEDSLSPHYFPQSPPQGEDSLSPHYFPQSPQGEDSLSPHYFPQSPPQGEDSMSPL 609
Query: 972 PFPVTRMSSR--------------SSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEA 1017
FP + + SS LP S+P + P E P + S P E
Sbjct: 610 YFPQSPLQGEEFQSSLQSPVSICSSSTPSSLPQSFPESSQSPPEGPVQSPLHSPQSPPEG 669
Query: 1018 V----PRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEAST 1073
+ P + G L L D S P Q E E SL
Sbjct: 670 MHSQSPLQSPESAPEGEDSLSPLQIPQSPLEGEDSLSSLHFP---QSPPEWEDSLSPLHF 726
Query: 1074 IEIPP-GESLQARAARILGIEVAVESL-LPGIRRAGQNQPAEPDASACTPESPQEELLSR 1131
+ PP GE Q+ + I + SL LP Q+ P P + PE P + L R
Sbjct: 727 PQFPPQGEDFQSSLQSPVSICSSSTSLSLP------QSFPESPQS---PPEGPAQSPLQR 777
Query: 1132 PAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEP 1191
P +F+ +T + L +S + P+ S + V+S
Sbjct: 778 P---------VSSFF-----SYTLASLLQSSHESPQSPPEGPAQSPLQSPVSSF------ 817
Query: 1192 EPSPLESKFFEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSP------SKVIESLQE 1245
PS S + V + P S+ + S + E L+SP S + E
Sbjct: 818 -PSSTSSSLSQSSPVSSFPSSTSS-------SLSKSSPESPLQSPVISFSSSTSLSPFSE 869
Query: 1246 KLASP 1250
+ +SP
Sbjct: 870 ESSSP 874
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 44.3 bits (103), Expect = 8e-04
Identities = 104/517 (20%), Positives = 178/517 (34%), Gaps = 76/517 (14%)
Query: 845 EEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPESPVC 904
EE++ + + + EE + ++E + E+ G E + P PE
Sbjct: 458 EEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAK 517
Query: 905 RSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLEVSNG 964
+ E+KS +E P A SP + E +P + K E +
Sbjct: 518 SPVKEEAKSP--AEAKSPEKEEA--KSPAEVKSPEKAKSP------AKEEAKSPPEAKSP 567
Query: 965 MDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPRKFDS 1024
E A SP V S AK A PAE + P++ A S VK P + S
Sbjct: 568 EKEEAKSPAEVKSPEKAKSPAKE-EAKSPAEAKSPEK------AKSPVKEEAKSPAEAKS 620
Query: 1025 GGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGESLQA 1084
+ A P + + + S P +E+ S + E + P
Sbjct: 621 PVKEEAKSPAEVKSPEKAKS----------PTKEEAKSPEKAKSPEKEEAKSPEKAKSPV 670
Query: 1085 RAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPE---SPQEELLSRPAPADVPRVS 1141
+A ++ + + A A +PE SP +E P A P V
Sbjct: 671 KAE----------------AKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSP-VK 713
Query: 1142 TDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKFF 1201
+A + KSP+ ++ A+ +A V PE SP ++K
Sbjct: 714 EEAKSPEK----AKSPV----KEEAKTPEKA------KSPVKEEAKSPEKAKSPEKAKTL 759
Query: 1202 EQKDVETKPPFRSTLFHFVERTPSVAGS--EKRLRSPSKVIESLQEKLASPPRRADPDRL 1259
+ K E K P + ++ P A S ++ ++SP K L+E A P + P +
Sbjct: 760 DVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKED-AKAPEKEIPKKE 818
Query: 1260 MRMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLS 1319
V + + + + + + E+ AT + + D +
Sbjct: 819 EVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEE----------KKDSKKEEAPKKE 868
Query: 1320 VSKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRV 1356
K + EEK+ PA +K K + ++ D +V
Sbjct: 869 APKPKV--EEKKEPAVEKPKESKVEAKKEEAEDKKKV 903
Score = 41.6 bits (96), Expect = 0.005
Identities = 102/514 (19%), Positives = 184/514 (35%), Gaps = 47/514 (9%)
Query: 836 ESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVG-FRGNSPEMRVEPQP 894
E +E EEEE+ + S E A P++E ++ ++E SPE P
Sbjct: 482 EGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSP 541
Query: 895 RMWVPESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSA 954
+SP + +++S E P A SP + E +P S +
Sbjct: 542 A--EVKSPEKAKSPAKEEAKSPPEAKSPEKEEA--KSPAEVKSPEKAKSPAKEEAKSPAE 597
Query: 955 EKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKP 1014
K + + + E A SP + S K A PAE + P+++ T +
Sbjct: 598 AKSPEKAKSPVKEEAKSP------AEAKSPVKE-EAKSPAEVKSPEKAKSPTKEEAKSPE 650
Query: 1015 SEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTI 1074
P K ++ A P+ K+ + +++ +P E+ S ++
Sbjct: 651 KAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSP--EKAKSPVKEEAKSPEKA 708
Query: 1075 EIPPGESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRP-- 1132
+ P E +A++ V E+ P ++ + A+ A +PE + + P
Sbjct: 709 KSPVKE--EAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEA 766
Query: 1133 -APA-DVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTD-PVP 1189
PA + R D F + KSP+ ++ + +A D + P
Sbjct: 767 KTPAKEEARSPADKFPEK-----AKSPV----KEEVKSPEKAKSPLKEDAKAPEKEIPKK 817
Query: 1190 EPEPSPLESKFFEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLAS 1249
E SP++ E+K E K V+ P A EK +P K E K
Sbjct: 818 EEVKSPVKE---EEKPQEVK----------VKEPPKKAEEEKAPATP-KTEEKKDSKKEE 863
Query: 1250 PPRRADPDRLMRMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGD 1309
P++ P + K+ +V + + + +E+AE+ K + P V
Sbjct: 864 APKKEAPKPKVEEKKEPAVEKPK--ESKVEAKKEEAEDKKKVPTPEKEAP-AKVEVKEDA 920
Query: 1310 RAQRLGHSLSVSKDSISREEKEHPAAQKEKSMDQ 1343
+ + D +E PA +KE + ++
Sbjct: 921 KPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEK 954
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 44.3 bits (103), Expect = 8e-04
Identities = 55/197 (27%), Positives = 78/197 (39%), Gaps = 27/197 (13%)
Query: 239 ESLSCTEIPIPLNERHSPKMPPYPPTCAPNLDS-TRNSEKSGCSAPFPRPKFGRPLKPPS 297
+S + + +P L HSP P PP P L + S K S P P+ PL
Sbjct: 812 KSPASSSLPAFLPTTHSPPGPQQPPASLPGLTAQPLLSPKEATSDPSRTPE-EEPLNLEG 870
Query: 298 YSSHQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLE---PPVYVP-PPSYRSPPQNI 353
+H+ + +++ Q + P SD E P P P RSP Q +
Sbjct: 871 LVAHRVA-----GVQAREKQPAEPPAPLRRRAASDGQYENQSPEATSPRSPGVRSPVQCV 925
Query: 354 PNPYLEDTVPINVCGG------HSQQQSPTEKAGA--SGQPPSG---PPGTG----NEYG 398
+P L T+ +N G HS +++ E G S PPSG PPG + G
Sbjct: 926 -SPELALTIALNPGGRPKEPHLHSYKEAFEEMEGTSPSSPPPSGVRSPPGLAKTPLSALG 984
Query: 399 VSPRLPQGLPAHPRPVT 415
+ P P + HP VT
Sbjct: 985 LKPHNPADILLHPTGVT 1001
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 43.9 bits (102), Expect = 0.001
Identities = 70/302 (23%), Positives = 116/302 (38%), Gaps = 34/302 (11%)
Query: 839 NKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWV 898
+K +E E S S SSS+E E E + ++ R+ G P+ P P+
Sbjct: 195 HKVTKEHRERPRKDSESKSSSKELEREQAKSSKDTSRKLG---EGRLPKEEKAPPPKAAF 251
Query: 899 PESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRH 958
E + E+K ES S + P P PP P R + P + SA+K+
Sbjct: 252 KEPKMALK---ETKLESTSPKGGPPPP---PPPPPRASSKR----PATADSPKPSAKKQK 301
Query: 959 LEVSNGMDELAGSPFPVTRMSSRSSDAKPL---------PASYPAEPREPQESPKITSAF 1009
S G G+ P T SS SD KP +EPRE +++ ++ +
Sbjct: 302 KSSSKGSRSAPGTS-PRTSSSSSFSDKKPAKDKSSTRGEKVKAESEPREAKKALEVEESN 360
Query: 1010 SSVKPS------EAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASE 1063
S + S ++ P S + + S + S LRS+ + Q + + E
Sbjct: 361 SEDEASFKSESAQSSPSNSSSSSDSSSDSDFEPSQNH---SQGPLRSM-VEDLQSEESDE 416
Query: 1064 LEGSLGEASTIEIPPGESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPES 1123
+ S GE + + PG + + + + +S LP +P P++ S
Sbjct: 417 DDSSSGEEAAGKTNPGRDSRLSFSDSES-DNSADSSLPSREPPPPQKPPPPNSKVSGRRS 475
Query: 1124 PQ 1125
P+
Sbjct: 476 PE 477
Score = 35.0 bits (79), Expect = 0.49
Identities = 49/239 (20%), Positives = 82/239 (34%), Gaps = 27/239 (11%)
Query: 976 TRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPRKFDSGGERGAGLPLS 1035
T++ S S P P P P+ S K + S KPS +K S G R A
Sbjct: 261 TKLESTSPKGGPPPPP----PPPPRASSKRPATADSPKPSAKKQKKSSSKGSRSAPGTSP 316
Query: 1036 LSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGESLQARAARILGIEVA 1095
++ + S ++ A + + GE E P E+ +A E
Sbjct: 317 RTSSSSSFS------------DKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSEDE 364
Query: 1096 VESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRVST------DAFYGRR 1149
+ + N + D+S+ + P + P + V + + D+ G
Sbjct: 365 ASFKSESAQSSPSNSSSSSDSSSDSDFEPSQNHSQGPLRSMVEDLQSEESDEDDSSSGEE 424
Query: 1150 KCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKFFEQKDVET 1208
G T RDS + + D + S +P P +P P SK ++ E+
Sbjct: 425 AAGKTNP-----GRDSRLSFSDSESDNSADSSLPSREPPPPQKPPPPNSKVSGRRSPES 478
Score = 31.2 bits (69), Expect = 7.1
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 42/243 (17%)
Query: 649 KQDLGEPEEDRQTNDLSFIH-LTK-HRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQL-- 704
K G + +++++ S H +TK HRE S ++ + + + S + S +L
Sbjct: 176 KPSHGSKDANKESSKTSKPHKVTKEHRERPRKDSESKSSSKELEREQAKSSKDTSRKLGE 235
Query: 705 --LPGAKLGGPSRAALS-PKCSDPAASEAQTHTAFPTGDHKQRP------SARNLKGHRS 755
LP + P +AA PK A E + + P G P S++ S
Sbjct: 236 GRLPKEEKAPPPKAAFKEPKM---ALKETKLESTSPKGGPPPPPPPPPRASSKRPATADS 292
Query: 756 LSPSSNSAFSRTSLSVDQAP--TPKAGRSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSK 813
PS+ +S AP +P+ S D + E VK E + P +K
Sbjct: 293 PKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEKVKAE-SEPREAK 351
Query: 814 QLFGQFLLKPVSRRPWDLISQLESFNKE------LQEEEESSSSSSSSSSSSEESEAEPQ 867
+ ++E N E + + S S+SSSSS SS +S+ EP
Sbjct: 352 KAL-----------------EVEESNSEDEASFKSESAQSSPSNSSSSSDSSSDSDFEPS 394
Query: 868 QEN 870
Q +
Sbjct: 395 QNH 397
Score = 31.2 bits (69), Expect = 7.1
Identities = 50/225 (22%), Positives = 81/225 (36%), Gaps = 24/225 (10%)
Query: 711 GGPSRAALSPKCSDPAASEAQTHTAF---PTGDHKQRPSARNLKGHRSLSP--SSNSAFS 765
GGP P P AS + TA P+ +++ S++ + SP SS+S+FS
Sbjct: 270 GGPP----PPPPPPPRASSKRPATADSPKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSFS 325
Query: 766 RTSLSVDQAPT----------PKAGRSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQL 815
+ D++ T P+ + V+ K E + P+ +S
Sbjct: 326 DKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDS 385
Query: 816 FGQFLLKPVSRRPWDLISQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCR 875
+P L S ++LQ EE S SSS + P +++R
Sbjct: 386 SSDSDFEPSQNHSQ---GPLRSMVEDLQSEE--SDEDDSSSGEEAAGKTNPGRDSRLSFS 440
Query: 876 QEDVGFRGNSPEMRVEPQPRMWVPESPVCRSGRGESKSESWSEEL 920
+ +S EP P P SGR +S S E++
Sbjct: 441 DSESDNSADSSLPSREPPPPQKPPPPNSKVSGRRSPESCSKPEKI 485
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 43.9 bits (102), Expect = 0.001
Identities = 95/420 (22%), Positives = 148/420 (35%), Gaps = 83/420 (19%)
Query: 252 ERHSPKMPPYPPTC------------APNLDSTRNSEKSGCSAPFPRPKFGRP-LKPPSY 298
E+ SP PP PPT P + G FPR + RP L+PP
Sbjct: 478 EQRSPPPPPPPPTLLNSSHPVPTQSPLPFTQPGPAFNQQGQQPVFPRERPVRPALQPPGP 537
Query: 299 SS--HQQSRGGADSSDSQDSQQM------DAYVPRHELCLSDPGLEPPVYVP-PPSYRSP 349
H G A + +Q ++P H + P L+ P++ P PP ++
Sbjct: 538 VGILHFSQPGSATTRPFIPPRQPFLPGPGQPFLPTH----TQPNLQGPLHPPLPPPHQPQ 593
Query: 350 PQNIPNPYLEDTVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPA 409
PQ QQQ P + QPP PP P PQ P
Sbjct: 594 PQ------------------QPQQQPPPQH-----QPPHQPPHQPPPQHQPP--PQHPPQ 628
Query: 410 HPRPVTAYDGFVQYI--------PFDDPRLR-HFKLAQPQGFCEDIKLDDKSYNSSPVTA 460
HP P + ++ P P+ R H + AQPQ ++ + T+
Sbjct: 629 HP-PQHQHHHHHHHLSVPPPPLMPMSQPQFRPHVQTAQPQASSSRMQCPQRQGLRHNTTS 687
Query: 461 QEPAHGGMQPDGAIWNPQSLIPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRC 520
Q + MQ Q P + + R L +A S + S P+ + +
Sbjct: 688 QNVSKRPMQ------QMQPTAPRNSNLRELPIAPSHVIEM-----SSSRCSATPSAQVKP 736
Query: 521 VARGQWPD--VRGSQHGHTGRQV----SSPYSQGESTCETQTKLKKFQTGT---RTKKSS 571
+ P V GS+ +V +SP +Q + +T+T+ T R K
Sbjct: 737 IVSASPPSRAVAGSRSSQGKTEVKVKPASPVAQPKEEAKTETEFPDEDEETRLYRLKIEE 796
Query: 572 KKKMNETIFCLVSIPVKSESHLPDRDMDNNDLKPSADQKNGSDKSPALQEQSLLSMSSTD 631
+K++ E I L ++ + R + + Q+ + PA QE+ LS S T+
Sbjct: 797 QKRLREEI--LKQKELRRQQQAGARKKELLERLAQQQQQLYAPPPPAEQEEQALSPSPTN 854
Score = 38.9 bits (89), Expect = 0.034
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 588 KSESHLPDRDMDNNDLKPS--ADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRT 645
K++S L D ++ N+DL S D++N S + + + M T EL T G
Sbjct: 57 KNQSDLSDEEL-NDDLLQSDNEDEENFSSQGVTISLNATSGMV-TSFELSDNTNDQSGEQ 114
Query: 646 EFQ-KQDLGEPEEDRQTNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQL 704
E + +Q+ GE E +D S ++ ++ E G + GH + Q + EEP+ QL
Sbjct: 115 ESEYEQEQGEDELVYHKSDGSELYTQEYPE---EGQYEGHEAELTEDQIEYVEEPEEEQL 171
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 43.5 bits (101), Expect = 0.001
Identities = 98/430 (22%), Positives = 149/430 (34%), Gaps = 76/430 (17%)
Query: 14 KLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTSAGKGHVSDSESRR 73
KL R PP R RT + +GL DGP L + + + +
Sbjct: 493 KLKRPPPPPR----------RTHSLHQRGL--AVPDGPLGLPPKP---------ERKQQP 531
Query: 74 STPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGRQEARSQKPREHEN 133
PR P +T S + A C PP+ +S P + RR R R+ P +
Sbjct: 532 QLPR----PPTTGGSEGAGAAPC--PPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYS 585
Query: 134 LEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAKWQNVS--LESWNQ 191
++ +LP GP G+++ KP LR G + +++ S +
Sbjct: 586 SQSG----TPTLPPKGLAGPPASPGKAQP--PKPERVTSLRSPGASVSSSLTSLCSSSSD 639
Query: 192 PR---KLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPESLSCTEIPI 248
P + G Q+ G+R +P + S K RS P +P + +P
Sbjct: 640 PAPSDRSGPQILTPLGDRFVIPPHPKVPAPF---SPPPSKPRS-PNPAAPALAAPAVVPG 695
Query: 249 PLNERH-SPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSSHQQSRGG 307
P++ SP+ PP P T L + K P P P + P PP+
Sbjct: 696 PVSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPPSPPPSY-HPPPPPTKKPEVVVEAP 754
Query: 308 ADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRS--------PPQNIPNPYLE 359
+ S +++ L DP PP PPP+ PP +
Sbjct: 755 SASETAEEP-------------LQDPNWPPP---PPPAPEEQDLSMADFPPPEEAFFSVA 798
Query: 360 DTVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDG 419
P G SP + ++ PPG SP P PA P P ++ G
Sbjct: 799 SPEPAGPSGSPELVSSPAASSSSATALQIQPPG-------SPDPPPAPPA-PAPASSAPG 850
Query: 420 FVQYIPFDDP 429
V +P +P
Sbjct: 851 HVAKLPQKEP 860
Score = 42.7 bits (99), Expect = 0.002
Identities = 114/449 (25%), Positives = 156/449 (34%), Gaps = 70/449 (15%)
Query: 705 LPGAKLGGPSRAALSPKC----SDPAASEAQTHTAFPTG--------DHKQRPSARNLKG 752
+PG GG R SP+ S +S++ T T P G Q P +
Sbjct: 559 VPGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTS 618
Query: 753 HRSLSPS-SNSAFSRTSLSVDQAPTPKAGRS--QPCVDVHGLGAHPGPKREVVKGEPTGP 809
RS S S+S S S S D AP+ ++G P D + HP P P
Sbjct: 619 LRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPA------PFSP 672
Query: 810 CNSKQLFGQFLLKPVSRRPWDLISQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQE 869
SK R P L + + S++ +S S + ++ P QE
Sbjct: 673 PPSKP-----------RSPNPAAPALAA--PAVVPGPVSTTDASPQSPPTPQTTLTPLQE 719
Query: 870 NRAHCRQEDVGFRGNSPEMRVEPQPRMWVPESPVCRSGRGESKSESWSEELQPGHPRAWP 929
+ + + + P P P PE V S SE+ E LQ + WP
Sbjct: 720 SPVISKDQSPP--PSPPPSYHPPPPPTKKPEVVV----EAPSASETAEEPLQDPN---WP 770
Query: 930 PSPGRFRVEEGGGAPFCSADGSTSAEKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLP 989
P P E+ AD E S +GSP V+ ++ SS A L
Sbjct: 771 PPPPPAPEEQD----LSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQ 826
Query: 990 ASYPAEPREPQESPKITSAFSSVKPSEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPD-- 1047
P P P P A S+ +P+K G +G G P + L P
Sbjct: 827 IQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPP--REDVGAPLVTPSLL 884
Query: 1048 ----LRSVGL---TPGQEQGASELEGSL-----GEASTIEIPPGESLQARAARILGIEVA 1095
LRSVG P G S + L G AS + P L A A R+ +A
Sbjct: 885 QMVRLRSVGAPGGAPTPALGPSAPQKPLRRALSGRASPVP-APSSGLHA-AVRLKACSLA 942
Query: 1096 VESLLPGIRRAGQNQPAEPDASACTPESP 1124
G+ A N P P+A P+SP
Sbjct: 943 ASE---GLSSAQPNGP--PEAEPRPPQSP 966
Score = 35.8 bits (81), Expect = 0.29
Identities = 53/203 (26%), Positives = 67/203 (33%), Gaps = 52/203 (25%)
Query: 220 VLNSQNKGKSRSLPRVLSPESLSCTEIPIPLNERHSPKMPPYPPTCAP------NLDSTR 273
V + + G S S V SP + S + + + SP PP PP AP ++
Sbjct: 797 VASPEPAGPSGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLP 856
Query: 274 NSEKSGCS--APFPRPKFGRPLKPPSYSSHQQSR-----GGADSSDSQDSQQMDAYVPRH 326
E GCS PR G PL PS + R GGA +
Sbjct: 857 QKEPVGCSKGGGPPREDVGAPLVTPSLLQMVRLRSVGAPGGAPT---------------- 900
Query: 327 ELCLSDPGLEPPVYVPP----PSYRSPPQNIPNPYLEDTVPINVCGGHSQQQSPTEKAGA 382
P L P P S R+ P P+ L V + C S G
Sbjct: 901 ------PALGPSAPQKPLRRALSGRASPVPAPSSGLHAAVRLKAC-------SLAASEGL 947
Query: 383 SGQPPSGPPGTGNEYGVSPRLPQ 405
S P+GPP PR PQ
Sbjct: 948 SSAQPNGPP------EAEPRPPQ 964
Score = 32.7 bits (73), Expect = 2.4
Identities = 94/429 (21%), Positives = 146/429 (34%), Gaps = 71/429 (16%)
Query: 848 SSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPESPVCRSG 907
S+S +S S S + PQ +R D S + V S + G
Sbjct: 384 SASPASVRSLGRFSSVSSPQPRSRHPSSSSDTWSHSQSSDTIVSDG-------STLSSKG 436
Query: 908 --RGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLEV-SNG 964
G+ +S + S + P PP G R GG+ ++D + L S
Sbjct: 437 GSEGQPESSTASNSVVP------PPQGGSGRGSPSGGSTAEASDTLSIRSSGQLSGRSVS 490
Query: 965 MDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPRKFDS 1024
+ +L P P R S +P P +P+ K +PR +
Sbjct: 491 LRKLKRPPPPPRRTHSLHQRGLAVPDGPLGLPPKPER-----------KQQPQLPRPPTT 539
Query: 1025 GGERGAGL----PLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPP-- 1078
GG GAG P ++ GLS R +P E+ S G ++ T +PP
Sbjct: 540 GGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSP--ERTLSPSSGYSSQSGTPTLPPKG 597
Query: 1079 --------GESLQARAARILGIE---VAVESLLPGIRRAGQNQPAEPDASACTPESPQEE 1127
G++ + R+ + +V S L + + + PA D S +P +
Sbjct: 598 LAGPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLC-SSSSDPAPSDRSGPQILTPLGD 656
Query: 1128 LLSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDP 1187
P VP SP R AP + V G V++TD
Sbjct: 657 RFVIPPHPKVPAPF--------------SPPPSKPRSPNPAAPALAAPAVVPGPVSTTDA 702
Query: 1188 VPEPEP------SPLESKFFEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIE 1241
P+ P +PL+ KD ++ PP +H P E + +PS E
Sbjct: 703 SPQSPPTPQTTLTPLQESPVISKD-QSPPPSPPPSYH--PPPPPTKKPEVVVEAPS-ASE 758
Query: 1242 SLQEKLASP 1250
+ +E L P
Sbjct: 759 TAEEPLQDP 767
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 43.1 bits (100), Expect = 0.002
Identities = 51/234 (21%), Positives = 66/234 (28%), Gaps = 27/234 (11%)
Query: 202 GDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPESLSCTEIPIPLNERHSPKMPPY 261
G G F P + G H + + P + P + P P P M Y
Sbjct: 391 GGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQY 450
Query: 262 PPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSSHQQSRGGADSSDSQDSQQMDA 321
+ R + G P P P PPS G Q Q
Sbjct: 451 LGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQP--- 507
Query: 322 YVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLEDTVPINVCGGHSQQQSPTEKAG 381
PP PPP S + P P+ ++T G ++
Sbjct: 508 ---------------PP---PPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQA 549
Query: 382 ASGQPPSGPPGTGNEY------GVSPRLPQGLPAHPRPVTAYDGFVQYIPFDDP 429
A+ P P GN GV P LP G P P P + Y P P
Sbjct: 550 AAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPP 603
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 42.7 bits (99), Expect = 0.002
Identities = 57/246 (23%), Positives = 83/246 (33%), Gaps = 50/246 (20%)
Query: 966 DELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPRKFDSG 1025
D LA P T + + ++ P PA PA + S V P A P+ S
Sbjct: 492 DRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSP 551
Query: 1026 GERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGESL--- 1082
E A + + R P + P Q + GS +PPG
Sbjct: 552 PETAA----PVEDMARRTKRPAPARPTMPPPQ------VSGSRSSPPAPPLPPGSGSPGT 601
Query: 1083 -QARAARILGIEVAVESLLPGI--------RRAGQNQPAEPDASACTPESPQEELLSRPA 1133
QA R++G + ++ P + RR + PA P ++ P SP LS PA
Sbjct: 602 PQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPA 661
Query: 1134 PADVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEP 1193
D +G + AP+A + GV T P+P P
Sbjct: 662 QVD-----------------------LGAATAEGGAPEA-----ISGVPTPPAIPPQPRP 693
Query: 1194 SPLESK 1199
L S+
Sbjct: 694 RSLASE 699
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 42.4 bits (98), Expect = 0.003
Identities = 82/364 (22%), Positives = 135/364 (37%), Gaps = 70/364 (19%)
Query: 696 SEEPQSSQLLPGAKLGGPS-RAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHR 754
SEE + Q P K P+ R L P AA +++ ++ + D + +
Sbjct: 91 SEEEEEVQGPPAKKAAVPAKRVGLPP--GKAAAKASESSSSEESSDDDDEEDQKKQPVQK 148
Query: 755 SLSPSSNSAFSRTSLSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQ 814
+ P + +A +AP KA S D E P N K
Sbjct: 149 GVKPQAKAA---------KAPPKKAKSSDSDSDS--------------SSEDEPPKNQKP 185
Query: 815 LFGQFLLKPVSRRPWDLISQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHC 874
+K ++ P + K + SSSSSSSSSSSS++SE +E A
Sbjct: 186 KITPVTVKAQTKAP---PKPARAAPKIANGKAASSSSSSSSSSSSDDSE----EEKAAAT 238
Query: 875 RQEDVGFRGNSPEMRVEPQPRMWVPESPVCRSGRGESKSESWSEEL------QPG----- 923
++ V P+ +V + + +P +S E S EE +PG
Sbjct: 239 PKKTV------PKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSV 292
Query: 924 -HPRAWPP------SPGRFRVEE----GGGAPFCSADGSTSAEKRHLEVSNGMDELAGSP 972
P A PP P + VE+ S+S E++ + + P
Sbjct: 293 PPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKP 352
Query: 973 FPVTRMSSRSSDAKPLPAS----YPAEP----REPQESPKITSAFSSVKPSEAVPRKFDS 1024
P + + SSD+ +S P++P + P +T+ +VKP+ A P++
Sbjct: 353 PPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPA-AAPKQPVG 411
Query: 1025 GGER 1028
GG++
Sbjct: 412 GGQK 415
Score = 38.5 bits (88), Expect = 0.044
Identities = 105/513 (20%), Positives = 185/513 (36%), Gaps = 71/513 (13%)
Query: 839 NKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWV 898
N + ++ + +SSS S SSEE E +G + P R+ +
Sbjct: 71 NGPVAKKAKKKASSSDSEDSSEEEEE----------------VQGPPAKKAAVPAKRVGL 114
Query: 899 PESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRH 958
P S SE S++ + P G + AP A S S
Sbjct: 115 PPGKAAAKASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSD-- 172
Query: 959 LEVSNGMDELAGSPFP-VTRMSSRSSDAKPLPASYPAEPREPQESPKITS--AFSSVKPS 1015
S+ DE + P +T ++ ++ P P+ + +PKI + A SS S
Sbjct: 173 ---SSSEDEPPKNQKPKITPVTVKAQTKAP--------PKPARAAPKIANGKAASSSSSS 221
Query: 1016 EAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIE 1075
+ DS E+ A P K + ++ +++ TP ++ +SE + S E +
Sbjct: 222 SSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKA-ATTPTRKSSSSE-DSSSDEEEEQK 279
Query: 1076 IP------PGESLQARAA----RILGIEVAVESLLPGIRRAGQNQPAE-PDASACTPESP 1124
P P S+ +A + LG + P + + QP E + S+ +S
Sbjct: 280 KPMKNKPGPYSSVPPPSAPPPKKSLGTQ-------PPKKAVEKQQPVESSEDSSDESDSS 332
Query: 1125 QEELLSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQ----AFEHSDVDG 1180
EE P A V + +T +K + S D AP ++S
Sbjct: 333 SEEEKKPPTKAVVSKATTKP-PPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKP 391
Query: 1181 VVTSTDPVPEPEPSPLESKFFEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVI 1240
VT+ P +P +P + QK + K S+ E + S K++ + +K
Sbjct: 392 AVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSS---EEESSSSEEEKTKKMVATTKPK 448
Query: 1241 ESLQEKLASPPRRADPDRLMRMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPG 1300
+ + L+ P ++A + S S ++ +E+ A + + G
Sbjct: 449 ATAKAALSLPAKQAPQGSRDSSSDSDSSS---------SEEEEEKTSKSAVKKKPQKVAG 499
Query: 1301 GLV--SPGSGDRAQRLGHSLSVSKDSISREEKE 1331
G P S + + + S S DS EE++
Sbjct: 500 GAAPSKPASAKKGKAESSNSSSSDDSSEEEEEK 532
Score = 31.2 bits (69), Expect = 7.1
Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 33/164 (20%)
Query: 249 PLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCS--------------APFPR---PKFGR 291
P+ + K PP P AP + + + + S S A P+ PK
Sbjct: 189 PVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQV 248
Query: 292 PLKPPSYSSHQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQ 351
K P ++ +R + S DS ++ + P + PG P VPPPS P +
Sbjct: 249 VAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMK----NKPG--PYSSVPPPSAPPPKK 302
Query: 352 NI----PNPYLEDTVPINVCGGHSQQQSPTEKAGASGQPPSGPP 391
++ P +E P+ + ++++ +S + PP
Sbjct: 303 SLGTQPPKKAVEKQQPV------ESSEDSSDESDSSSEEEKKPP 340
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 41.6 bits (96), Expect = 0.005
Identities = 44/175 (25%), Positives = 66/175 (37%), Gaps = 25/175 (14%)
Query: 256 PKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSSHQQSRGGADSSDSQD 315
P+ PP PP P P P+ + P PP S QQ+ SS
Sbjct: 754 PQQPPPPPQQPP-------------PPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPF 800
Query: 316 -SQQMDAYVPRHELCLSDP---GLEPPVYVP----PPSYRSPPQNIPNPYLEDTVPINVC 367
+ Q+ P+ + DP +P +++P PP PP++ P+L ++
Sbjct: 801 IATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPP 860
Query: 368 GGHS----QQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYD 418
H+ Q P+ +A A P+ PP +P LPQ A P V D
Sbjct: 861 ALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLED 915
Score = 40.0 bits (92), Expect = 0.015
Identities = 75/313 (23%), Positives = 121/313 (38%), Gaps = 30/313 (9%)
Query: 833 SQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAH-CRQEDVGFRGNSPEMRVE 891
S+++ F+ E ESSS SSSS S E+E P+ + + H R++ + +M+
Sbjct: 693 SKMKGFSSS---ESESSSESSSSDSEDSETEMAPKSKKKGHPGREQKKHHHHHHQQMQQA 749
Query: 892 PQPRMWVPESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGS 951
P P VP+ P + ++ P PP P ++ A S
Sbjct: 750 PAP---VPQQPPPPPQQPPPPPPPQQQQQPP------PPPPPPSMPQQAAPAMKSSPPPF 800
Query: 952 TSAEKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQES-PKITSAFS 1010
+ + LE +L GS F ++ P P P P+ P+ S P + +
Sbjct: 801 IATQVPVLE-----PQLPGSVFDPIGHFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHA 855
Query: 1011 SVKP---SEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGS 1067
V P A+P++ R A LP + +P L L P + ++
Sbjct: 856 VVSPPALHNALPQQPSRPSNRAAALPPKPARP--PAVSPALTQTPLLP--QPPMAQPPQV 911
Query: 1068 LGEASTIEIPPGESLQARA-ARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQE 1126
L E PP S+Q + + L LLP ++ Q+QP P P S Q+
Sbjct: 912 LLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVK--VQSQPPPPLPPPPHP-SVQQ 968
Query: 1127 ELLSRPAPADVPR 1139
+L +P P P+
Sbjct: 969 QLQQQPPPPPPPQ 981
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 41.6 bits (96), Expect = 0.005
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 833 SQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEP 892
S S + SSSSSSSSSSSS S + + + C +D +P P
Sbjct: 2638 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEA----APAPTAGP 2693
Query: 893 QPRMWVPESPVCRSGRGESKSESWSEELQPGHPRAWPPSP 932
+ +P ++G+ + S ++ P+A PP P
Sbjct: 2694 SAQAALPTKATKQAGKARPSAHSPGKKTPAPQPQAPPPQP 2733
Score = 34.7 bits (78), Expect = 0.64
Identities = 41/178 (23%), Positives = 56/178 (31%), Gaps = 13/178 (7%)
Query: 844 EEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPESPV 903
EE ESSSSSSS SSSS S + E + G G R
Sbjct: 2555 EESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGR-------------N 2601
Query: 904 CRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLEVSN 963
C + + S + S + S + S+ S+S+ S+
Sbjct: 2602 CSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2661
Query: 964 GMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPRK 1021
+ S SS SSD + PA + K T +PS P K
Sbjct: 2662 SSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPGK 2719
Score = 31.2 bits (69), Expect = 7.1
Identities = 19/81 (23%), Positives = 37/81 (45%)
Query: 707 GAKLGGPSRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSR 766
G GG + +A S + + PA+S + + ++ + S+ + S S SS+S+ S
Sbjct: 2594 GCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2653
Query: 767 TSLSVDQAPTPKAGRSQPCVD 787
+S S + + + S D
Sbjct: 2654 SSSSSSSSSSSSSSSSSSTTD 2674
>gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]
Length = 1062
Score = 41.6 bits (96), Expect = 0.005
Identities = 72/293 (24%), Positives = 95/293 (32%), Gaps = 59/293 (20%)
Query: 248 IPLNERHSPKMP---------PYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSY 298
IP N + P P P P AP L S SG P+ P Y
Sbjct: 788 IPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGS-----HPQAIVSSSTPQY 842
Query: 299 SSHQQSRGGA-----DSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNI 353
S +Q A S + Q+ A+ P+ P P S
Sbjct: 843 PSAEQPTPQALYATVHQSYPHHATQLHAHQPQ------------PATTPTGSQPQSQHAA 890
Query: 354 PNPYLEDTVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRP 413
P+P G QQ+ +G PPS PPG S + PQ + P+P
Sbjct: 891 PSPVQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGP------SAQSPQS--SFPQP 942
Query: 414 VTAYDGFVQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQ------EPAHGG 467
Y Q +P + H A Q I + +P Q +HGG
Sbjct: 943 AAVYAIHHQQLPHGFTNMAHVTQAHVQ---TGITAAPPPHPGAPHPPQVMLLHPPQSHGG 999
Query: 468 MQPDGAIWNPQSLIPPSGDERGLVLADSSPRWLWGQPPGD--GENSGLPNQRD 518
P GA+ PQS +P L + SP G P G+ G+ G P D
Sbjct: 1000 -PPQGAV--PQSGVP------ALSASTPSPYPYIGHPQGEQPGQAPGFPGGAD 1043
Score = 35.8 bits (81), Expect = 0.29
Identities = 92/407 (22%), Positives = 150/407 (36%), Gaps = 83/407 (20%)
Query: 839 NKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWV 898
N+ + EE+ ++ SS +++N RQ ++ + E+ PQ R+ +
Sbjct: 254 NEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIESSPQYRLRI 313
Query: 899 PESPVCRSGRGESKSESWSEELQPGHPRAWP----------PSPGRFRVEEGGGAPFCSA 948
+ G ++ E S + G R P P P R R GG S+
Sbjct: 314 ----AMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSS 369
Query: 949 DGS----TSAEKR---HLEVSNGM--DELAGSPFPVTRMSSRSS----DAKPL--PASYP 993
G +S R HL+ S+ E G +RMS ++ AK L P++ P
Sbjct: 370 RGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPSNRP 429
Query: 994 AEPREPQESPKITSAFSSVKPSEAVPRKFDSGGER---GAGLPLSLSNKNRGLSAPDLRS 1050
+ P + + P A P + G+ +P S ++ S D
Sbjct: 430 SGETSVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSSASIPVTSSVSDPGV 489
Query: 1051 VGLTPGQEQGASELEGSLGEASTIEIPPGESLQARA-ARILGIEVAVES-----LLPGIR 1104
++P + S + E ST E PG +L+ + ARI G +++ L +R
Sbjct: 490 GSISPASPK-ISLAPTDVKELSTKE--PGRTLEPQELARIAGKVPGLQNEQKRFQLEELR 546
Query: 1105 RAGQNQPAEPDASACTPESPQEELLSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRD 1164
+ G +P +S PE+ + P P PR+ + G+ K
Sbjct: 547 KFGAQFKLQPSSS---PENSLD-----PFP---PRILKEEPKGKEK-------------- 581
Query: 1165 SARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKFFEQKDVETKPP 1211
+VDG++TS EP SP+ SK D E KPP
Sbjct: 582 ------------EVDGLLTS-----EPMGSPVSSKTESVSDKEDKPP 611
Score = 30.8 bits (68), Expect = 9.2
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 7/107 (6%)
Query: 696 SEEPQSSQLLPGAKLGGPSRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRS 755
S +PQ + PGA G P P P +S Q + H+Q P H
Sbjct: 906 SGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAI-HHQQLPHGFTNMAH-- 962
Query: 756 LSPSSNSAFSRTSLSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVV 802
A +T ++ P P A + +H +H GP + V
Sbjct: 963 ----VTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAV 1005
>gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]
Length = 1097
Score = 41.6 bits (96), Expect = 0.005
Identities = 72/293 (24%), Positives = 95/293 (32%), Gaps = 59/293 (20%)
Query: 248 IPLNERHSPKMP---------PYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSY 298
IP N + P P P P AP L S SG P+ P Y
Sbjct: 788 IPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGS-----HPQAIVSSSTPQY 842
Query: 299 SSHQQSRGGA-----DSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNI 353
S +Q A S + Q+ A+ P+ P P S
Sbjct: 843 PSAEQPTPQALYATVHQSYPHHATQLHAHQPQ------------PATTPTGSQPQSQHAA 890
Query: 354 PNPYLEDTVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRP 413
P+P G QQ+ +G PPS PPG S + PQ + P+P
Sbjct: 891 PSPVQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGP------SAQSPQS--SFPQP 942
Query: 414 VTAYDGFVQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQ------EPAHGG 467
Y Q +P + H A Q I + +P Q +HGG
Sbjct: 943 AAVYAIHHQQLPHGFTNMAHVTQAHVQ---TGITAAPPPHPGAPHPPQVMLLHPPQSHGG 999
Query: 468 MQPDGAIWNPQSLIPPSGDERGLVLADSSPRWLWGQPPGD--GENSGLPNQRD 518
P GA+ PQS +P L + SP G P G+ G+ G P D
Sbjct: 1000 -PPQGAV--PQSGVP------ALSASTPSPYPYIGHPQGEQPGQAPGFPGGAD 1043
Score = 35.8 bits (81), Expect = 0.29
Identities = 92/407 (22%), Positives = 150/407 (36%), Gaps = 83/407 (20%)
Query: 839 NKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWV 898
N+ + EE+ ++ SS +++N RQ ++ + E+ PQ R+ +
Sbjct: 254 NEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIESSPQYRLRI 313
Query: 899 PESPVCRSGRGESKSESWSEELQPGHPRAWP----------PSPGRFRVEEGGGAPFCSA 948
+ G ++ E S + G R P P P R R GG S+
Sbjct: 314 ----AMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSS 369
Query: 949 DGS----TSAEKR---HLEVSNGM--DELAGSPFPVTRMSSRSS----DAKPL--PASYP 993
G +S R HL+ S+ E G +RMS ++ AK L P++ P
Sbjct: 370 RGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPSNRP 429
Query: 994 AEPREPQESPKITSAFSSVKPSEAVPRKFDSGGER---GAGLPLSLSNKNRGLSAPDLRS 1050
+ P + + P A P + G+ +P S ++ S D
Sbjct: 430 SGETSVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSSASIPVTSSVSDPGV 489
Query: 1051 VGLTPGQEQGASELEGSLGEASTIEIPPGESLQARA-ARILGIEVAVES-----LLPGIR 1104
++P + S + E ST E PG +L+ + ARI G +++ L +R
Sbjct: 490 GSISPASPK-ISLAPTDVKELSTKE--PGRTLEPQELARIAGKVPGLQNEQKRFQLEELR 546
Query: 1105 RAGQNQPAEPDASACTPESPQEELLSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRD 1164
+ G +P +S PE+ + P P PR+ + G+ K
Sbjct: 547 KFGAQFKLQPSSS---PENSLD-----PFP---PRILKEEPKGKEK-------------- 581
Query: 1165 SARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKFFEQKDVETKPP 1211
+VDG++TS EP SP+ SK D E KPP
Sbjct: 582 ------------EVDGLLTS-----EPMGSPVSSKTESVSDKEDKPP 611
Score = 30.8 bits (68), Expect = 9.2
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 7/107 (6%)
Query: 696 SEEPQSSQLLPGAKLGGPSRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRS 755
S +PQ + PGA G P P P +S Q + H+Q P H
Sbjct: 906 SGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAI-HHQQLPHGFTNMAH-- 962
Query: 756 LSPSSNSAFSRTSLSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVV 802
A +T ++ P P A + +H +H GP + V
Sbjct: 963 ----VTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAV 1005
>gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]
Length = 1075
Score = 41.6 bits (96), Expect = 0.005
Identities = 72/293 (24%), Positives = 95/293 (32%), Gaps = 59/293 (20%)
Query: 248 IPLNERHSPKMP---------PYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSY 298
IP N + P P P P AP L S SG P+ P Y
Sbjct: 788 IPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGS-----HPQAIVSSSTPQY 842
Query: 299 SSHQQSRGGA-----DSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNI 353
S +Q A S + Q+ A+ P+ P P S
Sbjct: 843 PSAEQPTPQALYATVHQSYPHHATQLHAHQPQ------------PATTPTGSQPQSQHAA 890
Query: 354 PNPYLEDTVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRP 413
P+P G QQ+ +G PPS PPG S + PQ + P+P
Sbjct: 891 PSPVQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGP------SAQSPQS--SFPQP 942
Query: 414 VTAYDGFVQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQ------EPAHGG 467
Y Q +P + H A Q I + +P Q +HGG
Sbjct: 943 AAVYAIHHQQLPHGFTNMAHVTQAHVQ---TGITAAPPPHPGAPHPPQVMLLHPPQSHGG 999
Query: 468 MQPDGAIWNPQSLIPPSGDERGLVLADSSPRWLWGQPPGD--GENSGLPNQRD 518
P GA+ PQS +P L + SP G P G+ G+ G P D
Sbjct: 1000 -PPQGAV--PQSGVP------ALSASTPSPYPYIGHPQGEQPGQAPGFPGGAD 1043
Score = 35.8 bits (81), Expect = 0.29
Identities = 92/407 (22%), Positives = 150/407 (36%), Gaps = 83/407 (20%)
Query: 839 NKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWV 898
N+ + EE+ ++ SS +++N RQ ++ + E+ PQ R+ +
Sbjct: 254 NEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIESSPQYRLRI 313
Query: 899 PESPVCRSGRGESKSESWSEELQPGHPRAWP----------PSPGRFRVEEGGGAPFCSA 948
+ G ++ E S + G R P P P R R GG S+
Sbjct: 314 ----AMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSS 369
Query: 949 DGS----TSAEKR---HLEVSNGM--DELAGSPFPVTRMSSRSS----DAKPL--PASYP 993
G +S R HL+ S+ E G +RMS ++ AK L P++ P
Sbjct: 370 RGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPSNRP 429
Query: 994 AEPREPQESPKITSAFSSVKPSEAVPRKFDSGGER---GAGLPLSLSNKNRGLSAPDLRS 1050
+ P + + P A P + G+ +P S ++ S D
Sbjct: 430 SGETSVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSSASIPVTSSVSDPGV 489
Query: 1051 VGLTPGQEQGASELEGSLGEASTIEIPPGESLQARA-ARILGIEVAVES-----LLPGIR 1104
++P + S + E ST E PG +L+ + ARI G +++ L +R
Sbjct: 490 GSISPASPK-ISLAPTDVKELSTKE--PGRTLEPQELARIAGKVPGLQNEQKRFQLEELR 546
Query: 1105 RAGQNQPAEPDASACTPESPQEELLSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRD 1164
+ G +P +S PE+ + P P PR+ + G+ K
Sbjct: 547 KFGAQFKLQPSSS---PENSLD-----PFP---PRILKEEPKGKEK-------------- 581
Query: 1165 SARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKFFEQKDVETKPP 1211
+VDG++TS EP SP+ SK D E KPP
Sbjct: 582 ------------EVDGLLTS-----EPMGSPVSSKTESVSDKEDKPP 611
Score = 30.8 bits (68), Expect = 9.2
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 7/107 (6%)
Query: 696 SEEPQSSQLLPGAKLGGPSRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRS 755
S +PQ + PGA G P P P +S Q + H+Q P H
Sbjct: 906 SGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAI-HHQQLPHGFTNMAH-- 962
Query: 756 LSPSSNSAFSRTSLSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVV 802
A +T ++ P P A + +H +H GP + V
Sbjct: 963 ----VTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAV 1005
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 41.2 bits (95), Expect = 0.007
Identities = 66/259 (25%), Positives = 85/259 (32%), Gaps = 45/259 (17%)
Query: 259 PPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSSHQQSRGGADS-----SDS 313
PP P T P + S+ ++ S PR P PP + + GG S S
Sbjct: 185 PPVPSTPRP-IQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSS 243
Query: 314 QDSQQMDAYVPRHELCLSD--PGLEPPV---------YVPPPSYRSPPQNIPNPYLEDTV 362
P L D P PPV VPPP PPQN P
Sbjct: 244 SPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP----PPQNNKPPVPSTPR 299
Query: 363 PINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQ-----GLPAHPRPVTAY 417
P SQ P G PP P +GN+ +PRLPQ P P
Sbjct: 300 P----SASSQAPPPPPPPSRPGPPPLPPSSSGND--ETPRLPQRNLSLSSSTPPLPSPGR 353
Query: 418 DGFVQYIPFD-------DPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQP 470
G + P + DP R L P + + + + P T Q P+ G+
Sbjct: 354 SGPLPPPPSERPPPPVRDPPGRSGPLPPP----PPVSRNGSTSRALPATPQLPSRSGV-- 407
Query: 471 DGAIWNPQSLIPPSGDERG 489
D P+ +PP G
Sbjct: 408 DSPRSGPRPPLPPDRPSAG 426
Score = 35.8 bits (81), Expect = 0.29
Identities = 51/192 (26%), Positives = 64/192 (33%), Gaps = 45/192 (23%)
Query: 267 PNLDSTRNSEK-SGCSAPFPRPKFGR-----PLKPPSYSSHQQSRGGADSSDSQDSQQMD 320
P L ST N + SG S P P GR P PPS S + Q+
Sbjct: 109 PKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNR 168
Query: 321 AYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED------------TVPIN--- 365
PR ++ + PPV P +S P N +P + P N
Sbjct: 169 MPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGT 228
Query: 366 VCGGHSQQQSP---------------TEKAGASGQPPSGPPGTGN-----EYGVSPRLPQ 405
GG S +QSP T +PP PP GN V P PQ
Sbjct: 229 ALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQ 288
Query: 406 G----LPAHPRP 413
+P+ PRP
Sbjct: 289 NNKPPVPSTPRP 300
Score = 35.8 bits (81), Expect = 0.29
Identities = 48/193 (24%), Positives = 65/193 (33%), Gaps = 34/193 (17%)
Query: 213 PFIQGEHVLNSQNKGKSRSLPRVLSPESLSCTEIPIPLNERHSPKMPPYPPTCAPNLDS- 271
P I E V + +P P + S P P R P PP PP+ + N ++
Sbjct: 275 PSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP--PPLPPSSSGNDETP 332
Query: 272 ---TRNSEKSGCSAPFPRPKFGRPLKPPSYSSHQQSRGGADSSDSQDSQQMDAYVPRHEL 328
RN S + P P P PL PP S+ D
Sbjct: 333 RLPQRNLSLSSSTPPLPSPGRSGPLPPP-------------PSERPPPPVRD-------- 371
Query: 329 CLSDPGLEPPVYVPPPSYR--SPPQNIP-NPYLEDTVPINVCGGHSQQQSPTEKAGASGQ 385
PG P+ PPP R S + +P P L ++ + P ++ A G
Sbjct: 372 ---PPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSA-GA 427
Query: 386 PPSGPPGTGNEYG 398
PP PP T G
Sbjct: 428 PPPPPPSTSIRNG 440
Score = 33.5 bits (75), Expect = 1.4
Identities = 50/194 (25%), Positives = 66/194 (34%), Gaps = 54/194 (27%)
Query: 221 LNSQNKGKSRSLPRVLSPESLSCTEIPIPLNERHSPK----------MPPYPPT------ 264
L +N S S P + SP +P P +ER P +PP PP
Sbjct: 334 LPQRNLSLSSSTPPLPSPGRSG--PLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGST 391
Query: 265 -----CAPNLDSTR--NSEKSGCSAPFP--RPKFGRPLKPPSYSSHQQSRGGADSSDSQD 315
P L S +S +SG P P RP G P PP +S R G S +D
Sbjct: 392 SRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTS---IRNGFQDSPCED 448
Query: 316 SQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLEDT--VPINVCGGHSQQ 373
+ Y P +PP P PY++ T P + S+
Sbjct: 449 EWESRFY------------FHPISDLPP----------PEPYVQTTKSYPSKLARNESRS 486
Query: 374 QSPTEKAGASGQPP 387
S + GA PP
Sbjct: 487 GSNRRERGAPPLPP 500
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 41.2 bits (95), Expect = 0.007
Identities = 66/259 (25%), Positives = 85/259 (32%), Gaps = 45/259 (17%)
Query: 259 PPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSSHQQSRGGADS-----SDS 313
PP P T P + S+ ++ S PR P PP + + GG S S
Sbjct: 185 PPVPSTPRP-IQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSS 243
Query: 314 QDSQQMDAYVPRHELCLSD--PGLEPPV---------YVPPPSYRSPPQNIPNPYLEDTV 362
P L D P PPV VPPP PPQN P
Sbjct: 244 SPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP----PPQNNKPPVPSTPR 299
Query: 363 PINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQ-----GLPAHPRPVTAY 417
P SQ P G PP P +GN+ +PRLPQ P P
Sbjct: 300 P----SASSQAPPPPPPPSRPGPPPLPPSSSGND--ETPRLPQRNLSLSSSTPPLPSPGR 353
Query: 418 DGFVQYIPFD-------DPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQP 470
G + P + DP R L P + + + + P T Q P+ G+
Sbjct: 354 SGPLPPPPSERPPPPVRDPPGRSGPLPPP----PPVSRNGSTSRALPATPQLPSRSGV-- 407
Query: 471 DGAIWNPQSLIPPSGDERG 489
D P+ +PP G
Sbjct: 408 DSPRSGPRPPLPPDRPSAG 426
Score = 35.8 bits (81), Expect = 0.29
Identities = 51/192 (26%), Positives = 64/192 (33%), Gaps = 45/192 (23%)
Query: 267 PNLDSTRNSEK-SGCSAPFPRPKFGR-----PLKPPSYSSHQQSRGGADSSDSQDSQQMD 320
P L ST N + SG S P P GR P PPS S + Q+
Sbjct: 109 PKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNR 168
Query: 321 AYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED------------TVPIN--- 365
PR ++ + PPV P +S P N +P + P N
Sbjct: 169 MPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGT 228
Query: 366 VCGGHSQQQSP---------------TEKAGASGQPPSGPPGTGN-----EYGVSPRLPQ 405
GG S +QSP T +PP PP GN V P PQ
Sbjct: 229 ALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQ 288
Query: 406 G----LPAHPRP 413
+P+ PRP
Sbjct: 289 NNKPPVPSTPRP 300
Score = 35.8 bits (81), Expect = 0.29
Identities = 48/193 (24%), Positives = 65/193 (33%), Gaps = 34/193 (17%)
Query: 213 PFIQGEHVLNSQNKGKSRSLPRVLSPESLSCTEIPIPLNERHSPKMPPYPPTCAPNLDS- 271
P I E V + +P P + S P P R P PP PP+ + N ++
Sbjct: 275 PSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP--PPLPPSSSGNDETP 332
Query: 272 ---TRNSEKSGCSAPFPRPKFGRPLKPPSYSSHQQSRGGADSSDSQDSQQMDAYVPRHEL 328
RN S + P P P PL PP S+ D
Sbjct: 333 RLPQRNLSLSSSTPPLPSPGRSGPLPPP-------------PSERPPPPVRD-------- 371
Query: 329 CLSDPGLEPPVYVPPPSYR--SPPQNIP-NPYLEDTVPINVCGGHSQQQSPTEKAGASGQ 385
PG P+ PPP R S + +P P L ++ + P ++ A G
Sbjct: 372 ---PPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSA-GA 427
Query: 386 PPSGPPGTGNEYG 398
PP PP T G
Sbjct: 428 PPPPPPSTSIRNG 440
Score = 33.5 bits (75), Expect = 1.4
Identities = 50/194 (25%), Positives = 66/194 (34%), Gaps = 54/194 (27%)
Query: 221 LNSQNKGKSRSLPRVLSPESLSCTEIPIPLNERHSPK----------MPPYPPT------ 264
L +N S S P + SP +P P +ER P +PP PP
Sbjct: 334 LPQRNLSLSSSTPPLPSPGRSG--PLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGST 391
Query: 265 -----CAPNLDSTR--NSEKSGCSAPFP--RPKFGRPLKPPSYSSHQQSRGGADSSDSQD 315
P L S +S +SG P P RP G P PP +S R G S +D
Sbjct: 392 SRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTS---IRNGFQDSPCED 448
Query: 316 SQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLEDT--VPINVCGGHSQQ 373
+ Y P +PP P PY++ T P + S+
Sbjct: 449 EWESRFY------------FHPISDLPP----------PEPYVQTTKSYPSKLARNESRS 486
Query: 374 QSPTEKAGASGQPP 387
S + GA PP
Sbjct: 487 GSNRRERGAPPLPP 500
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 41.2 bits (95), Expect = 0.007
Identities = 87/385 (22%), Positives = 136/385 (35%), Gaps = 34/385 (8%)
Query: 712 GPSRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPS---SNSAFSRTS 768
G S + LS D + ++ T G K +P R SPS SN F+ +
Sbjct: 977 GTSNSTLSGPGLDSKPGK-RSRTPSNDGKSKDKPPKRKKADTEGKSPSHSSSNRPFTPPT 1035
Query: 769 LSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRP 828
+ AGRSQ G+ P PK + + T + KP S
Sbjct: 1036 STGGSKSPGSAGRSQT---PPGVATPPIPKITIQIPKGT----------VMVGKPSSHSQ 1082
Query: 829 WDLISQLESFNKELQEEEESSSSSSSSSSSS-EESEAEPQQENRAHCRQEDVGFRGNSPE 887
+ + S + SSSSSS+S+S + S++E ++ S +
Sbjct: 1083 YTSSGSVSSSGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLSSSMYSSQGSSGSSQ 1142
Query: 888 MRVEPQPRMWVPESPVCR----SGRGESKSESWSEELQPGHPRAWPP--SPGRFRVEEGG 941
+ Q SP+ + SG +K + + +P P SP R G
Sbjct: 1143 SKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSKPNISPSHSRPPGGS 1202
Query: 942 ---GAPFCSADGSTSAEKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPRE 998
+P G+ + K +S+G GS T SS + L +S +
Sbjct: 1203 DKLASPMKPVPGTPPSSKAKSPISSGS---GGSHMSGTSSSSGMKSSSGLGSSGSLSQKT 1259
Query: 999 PQESPKITSAFSSVKPSEAVPRKFDSGGERGAGLPLSLS-NKNRGLSAP-DLRSVGLTPG 1056
P S T++ SS S + S + G+ S S NK L+A D G+
Sbjct: 1260 PPSSNSCTASSSSFSSSGS--SMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTS 1317
Query: 1057 QEQGASELEGSLGEASTIEIPPGES 1081
G L+G +G ++ P S
Sbjct: 1318 GPGGEDPLDGQMGVSTNSSSHPMSS 1342
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 41.2 bits (95), Expect = 0.007
Identities = 48/218 (22%), Positives = 62/218 (28%), Gaps = 27/218 (12%)
Query: 202 GDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPESLSCTEIPIPLNERHSPKMPPY 261
G G F P + G H + + P + P + P P P M Y
Sbjct: 391 GGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQY 450
Query: 262 PPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSSHQQSRGGADSSDSQDSQQMDA 321
+ R + G P P P PPS G Q Q
Sbjct: 451 LGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQP--- 507
Query: 322 YVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLEDTVPINVCGGHSQQQSPTEKAG 381
PP PPP S + P P+ ++T G ++
Sbjct: 508 ---------------PP---PPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQA 549
Query: 382 ASGQPPSGPPGTGNEY------GVSPRLPQGLPAHPRP 413
A+ P P GN GV P LP G P P P
Sbjct: 550 AAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPP 587
>gi|145386517 phostensin [Homo sapiens]
Length = 613
Score = 41.2 bits (95), Expect = 0.007
Identities = 95/392 (24%), Positives = 136/392 (34%), Gaps = 45/392 (11%)
Query: 795 PGPKREVVKGEPTGPCNSKQLFGQFLLKPVSR--RPWDLISQLESFNKELQEEEESSSSS 852
P P V E GP + + Q + + R +L+++ + E +E S
Sbjct: 70 PDPDESAVLLEAIGPVHQNRFIRQERQQQQQQQQRSEELLAERKPGPLEARERRPSPGEM 129
Query: 853 SSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEP-QPRMWVPESPVCRSGRGES 911
S ES E R+ +G + E+ + P + R W +SP R
Sbjct: 130 RDQSPKGRESREERLSPRETRERRLGIG---GAQELSLRPLEARDW-RQSPGEVGDRSSR 185
Query: 912 KSESWSEELQPGH--------PRAWPPSPGRFRVEE--GGGAPFCSADGSTSAEKRHLEV 961
SE+W L PG + SP R VE G G T A K +
Sbjct: 186 LSEAWKWRLSPGETPERSLRLAESREQSPRRKEVESRLSPGESAYQKLGLTEAHKWRPD- 244
Query: 962 SNGMDELAGSPFPVTRMSSRSSDAK-------------PLPASYPAEPREPQESPKITSA 1008
S E + T RS + + P+P P E E E+ +
Sbjct: 245 SRESQEQSLVQLEATEWRLRSGEERQDYSEECGRKEEWPVPGVAPKETAELSETLTREAQ 304
Query: 1009 FSSVKPSEAVPRKFDSGGERG----AGLPLSL-SNKNRGLSAPDLRSVGLTPGQEQGASE 1063
+S EA ++ GERG G +L S K R + D+ + P + A +
Sbjct: 305 GNSSAGVEAAEQRPVEDGERGMKPTEGWKWTLNSGKAREWTPRDIEAQTQKPEPPESAEK 364
Query: 1064 LEGSLG-EASTIEIPPGES-LQARAARILGIEVAVESLLP------GIRRAGQNQPAEPD 1115
L S G EA E E+ Q R R L +V S LP G R + + E
Sbjct: 365 LLESPGVEAGEGEAEKEEAGAQGRPLRALQNCCSVPSPLPPEDAGTGGLRQQEEEAVELQ 424
Query: 1116 ASACTPESPQEELLSRPAPADVPRVSTDAFYG 1147
P SP + P P P +S FYG
Sbjct: 425 PPPPAPLSPPPPAPTAPQPPGDPLMSR-LFYG 455
>gi|199559805 phostensin [Homo sapiens]
Length = 613
Score = 41.2 bits (95), Expect = 0.007
Identities = 95/392 (24%), Positives = 136/392 (34%), Gaps = 45/392 (11%)
Query: 795 PGPKREVVKGEPTGPCNSKQLFGQFLLKPVSR--RPWDLISQLESFNKELQEEEESSSSS 852
P P V E GP + + Q + + R +L+++ + E +E S
Sbjct: 70 PDPDESAVLLEAIGPVHQNRFIRQERQQQQQQQQRSEELLAERKPGPLEARERRPSPGEM 129
Query: 853 SSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEP-QPRMWVPESPVCRSGRGES 911
S ES E R+ +G + E+ + P + R W +SP R
Sbjct: 130 RDQSPKGRESREERLSPRETRERRLGIG---GAQELSLRPLEARDW-RQSPGEVGDRSSR 185
Query: 912 KSESWSEELQPGH--------PRAWPPSPGRFRVEE--GGGAPFCSADGSTSAEKRHLEV 961
SE+W L PG + SP R VE G G T A K +
Sbjct: 186 LSEAWKWRLSPGETPERSLRLAESREQSPRRKEVESRLSPGESAYQKLGLTEAHKWRPD- 244
Query: 962 SNGMDELAGSPFPVTRMSSRSSDAK-------------PLPASYPAEPREPQESPKITSA 1008
S E + T RS + + P+P P E E E+ +
Sbjct: 245 SRESQEQSLVQLEATEWRLRSGEERQDYSEECGRKEEWPVPGVAPKETAELSETLTREAQ 304
Query: 1009 FSSVKPSEAVPRKFDSGGERG----AGLPLSL-SNKNRGLSAPDLRSVGLTPGQEQGASE 1063
+S EA ++ GERG G +L S K R + D+ + P + A +
Sbjct: 305 GNSSAGVEAAEQRPVEDGERGMKPTEGWKWTLNSGKAREWTPRDIEAQTQKPEPPESAEK 364
Query: 1064 LEGSLG-EASTIEIPPGES-LQARAARILGIEVAVESLLP------GIRRAGQNQPAEPD 1115
L S G EA E E+ Q R R L +V S LP G R + + E
Sbjct: 365 LLESPGVEAGEGEAEKEEAGAQGRPLRALQNCCSVPSPLPPEDAGTGGLRQQEEEAVELQ 424
Query: 1116 ASACTPESPQEELLSRPAPADVPRVSTDAFYG 1147
P SP + P P P +S FYG
Sbjct: 425 PPPPAPLSPPPPAPTAPQPPGDPLMSR-LFYG 455
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.128 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,985,333
Number of Sequences: 37866
Number of extensions: 4094476
Number of successful extensions: 22318
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 624
Number of HSP's that attempted gapping in prelim test: 18369
Number of HSP's gapped (non-prelim): 3928
length of query: 1359
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1244
effective length of database: 13,892,928
effective search space: 17282802432
effective search space used: 17282802432
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.